| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE02800 |
|---|
| Symbol | |
|---|
| ID | 3257699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006687 |
|---|
| Strand | + |
|---|
| Start bp | 739685 |
|---|
| End bp | 740785 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | 638256870 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_570988 |
|---|
| Protein GI | 58267664 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCCCT TCCTTCCAGC ACTCAGATCA GGTAAGCACC GCCGCCCACC CCGCCGCCAC
CGCTCACCCC GCCGCCACCG CTCACCCCCA CCAGCCGCCA GGCCCGCCGC GTTCAGACCC
GCACTCGCAC TCGGTACGCA CCCCTGCACG CCTATTCTGA CTCGCATCTA ACCCGCATCT
AACCCGCATC TGCAGCCCGT CCGCTCTCAA GCACCGCCGT CGCCCCCAGG CCCCACACAC
CCACCTCCGC CATCAACTCG TACGACCACT CGCCCTCCAC CACTCTGCCA GACACCACCA
TCGCCCAGCA AAAGAGCAAC CAGTTGAGTC TCGAGACACC TAGAAACGGC GCCGAGTATG
TCCTTTCAAC GCTCGACAAG ATTGTCAACT GGGGTCGCCA AGGGTCCATG TGGCCCATGA
CCTTTGGTCT CGCCTGCTGC GCCGTCGAAA TGATGTATGT GCAATCGCTT GTTTCTGAAT
GGCCAGTTGC TCATTTGGCC ACAGGCACAT GGCTGCCGCC CGATATGATC AAGATCGACT
CGGTGTCGTC TTCCGAGCGT CCCCCCGACA GAGTGATGTT ATGATTGTAG CAGGTACTTT
AACAAACAAG ATGGCGCCTG CGTTGAGAAA AGGTCGGTCT GAAAAAAAAA AAACGGCCAA
TCAAACTGAC ACGGCCGCAG TGTACGACCA AATGCCCGAA CCCCGATGGG TCATTTCTAT
GGGTTCATGC GCCAATGGCG GTGGCTACTA CCACTACTCG TACTCGGTCG TGCGAGGCTG
TGACCGAATC GTGCCTGTCG ACATCTATGT CCCCGGATGG TAGGTTTTCA TTCGCCACTT
TACCCTTGTT CCCCTGCTTA TTTTTTGCAT AGTCCTCCCA CCGCCGAGGC CCTTCTCTAC
GGAATGCTCC AATTAATGCG AAAGATGAGG CGTAACAGGC AGAGTGTGCG ATGGTACCGA
AGGTAGATGA AGTTTTTGGT GGCGAATGGA GAGTCGGGCG TGTAGGATTT ATGAGAGTTC
CGGGTCTCTT GTGAGGGGCA TAGAGATGAG CTGTAGCTGG ACGCTCGTTG TGTTTTATTT
CATCCATGCA TAGGATCATG A
|
|---|
| Protein sequence | MSPFLPALRS GKHRRPPRRH RSPRRHRSPP PAARPAAFRP ALALARPLSS TAVAPRPHTP
TSAINSYDHS PSTTLPDTTI AQQKSNQLSL ETPRNGAEYV LSTLDKIVNW GRQGSMWPMT
FGLACCAVEM MHMAAARYDQ DRLGVVFRAS PRQSDVMIVA GTLTNKMAPA LRKVYDQMPE
PRWVISMGSC ANGGGYYHYS YSVVRGCDRI VPVDIYVPGC PPTAEALLYG MLQLMRKMRR
NRQSVRWYRR
|
|---|
| |