| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE02730 |
|---|
| Symbol | |
|---|
| ID | 3257495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006687 |
|---|
| Strand | - |
|---|
| Start bp | 725198 |
|---|
| End bp | 727630 |
|---|
| Gene Length | 2433 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638256863 |
|---|
| Product | hexose transport-related protein, putative |
|---|
| Protein accession | XP_570981 |
|---|
| Protein GI | 58267650 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CACGACACCT ATATAACATG TTCTTCAAGA AAAACAGTGA CGCGCCAAAA AAGCCAAGAC
ATGCCCCAGA TAGGGACGAC GTCCCAAGTC TAGAGGACCT AGGTGTTGAA CTCCATCCTG
ATACTGCTCG TTATGTGGCG GACAGTCAGG CATTGGCTGA TGCAATCGGC GGAAATGGTC
AGTATTCTAT ATTTTTTCAT GACCTGTCTT GTACTCATAC CTTGTGCAGG TCTCAAGGAT
ATATTCAGCA GTGGGCTCGT CTTGATTGCA GCCTTCTCCA CATGTATGGG CGGTCTGCTA
TTCGGTTTCG ACCAGGGTAT TCTTTCCATT GTCCTTACCA TGAGCCAATT CCTGGGCCAG
TTTCCCGATG TCGATGCCAA TGTCAGCTCT TCTGCTGCCT TCAACAAAGG GTAAGTGTTC
GCCGCGTCGG AGCTAATTCT TACCCTTGAA AAAGAGTTGA CAACTGATTG TCTTGACTCG
CAGTATCATG ACCGCCCTTC TGGAACTGGG TGCTTTTATC GGAGCCCTTC AAGCTGGTTT
TGTCGCAGAC AGGTATTCTC GTAAAAAGGC CATCGGTTAG TTGCCAAACT CTTGTAGACG
AGTGACACTG GCTGACACTA GCTGGAAAAA AAAAGCTCTC GGTTCAGTGT GGTTTGTTAT
TGGTGCTATT CTCCAGACTA CATCCTACTC CTTTGCCCAG CTAGTCATTG GCCGATTCGT
CGGTGGTCTT GGTGTTGGCC TTCTCTCTGC TGTGGCCCCA ATGTATATCA GCGAAATTTC
ACCACCAAAC ATTCGAGGCT CATTGCTCGC CATGGAGGCT GCCACCATTG TCAGCGGTAT
CGTCATCATG TTCTACATTG TGAGTATTGT CTACTTACCA TACAGAACCA TTTCTTATTC
ATCTTTTGAA TAGACTTATG GCTCCCGATA CATCCCTGGC GACTGGAGTT TCCGACTTCC
TTTCCTCGTG CAGGTAGCCC CCTGTATCCT CTTGACAATC GGTCTTTGGA AACTTCCTTA
TTCTCCGCGA TGGCTTGCTC AGGTAGGCAG AGATGAAGAT TCTCTGCACG CTCTCATGCG
CCTCCGAGGA TTCCCCGTTA CCGACCCTCG TCTGCAGGCC GAGTGGATCA CCATCAGAGC
CGAGGCTATT CAAAACCGAG AAGTTATTGT CAAGGCCCAC CCTTCCCTTC AAGGCAAGGA
CTTTATGTCC GAGCTCAAAC TTGAGATTGC TTCTTGGGTC GACATGTTTA AGCCCAAGCT
CATCAGGCGA ACTATCATTG GTCCCATTTT GATGATGTTC CAGCAATTTT CTGGTATCAA
CGCTGTAAGT TTTCATTATG GAACACATGA GAAGATTGGA CATTGGTTTC TGACCACCAG
TACATCAGCT CATCTACTAC TCTCCTACTC TCTTTGAGCA ACTTGGCCTC GACTACGAGA
TGCAGCTTGA CATGAGCGGT GTCCTCAACA TCATTCAATT GGTCGCCTGT GTGCTCGCCT
TTTTCGTTAT TGACAGAGTA GGACGAAGGC CGCTTCTTCT CTTTGGATCT ACCGCCAACA
CCATCTGTCA CGTCATTGTG GCGGTCGTCA TGGCCAAGTT CAGTCACGAT TGGGTTCGAT
ACAGCAAGGA GGCATGGGTG GCCGTTGCAT TTATCTTCAT CTACATCTTC ACCTACGGTG
TTGGTTGGGC TCCCGTACCT TGGGCCATGC GTAAGTTCTT TTGGGGGTTT CCAAACAACA
TGCGAGAGAC CAGAGTCTAA TAACAGCATC GTAGCTGCCG AGGTTCACAC TTCAAGTCGC
CGAGCCAAGG GTGTCGCCAT CACGACTTGC GCCAACTGGT TGGGCAACTT TATTATTGGT
CTCATCACCC CACCCATGCT TCAGAACATC AAGTACGGCA CCTTCCTTTT CTTTGGCGCC
TTCACATTCC TTTCCGGTCT CTACGTCTGG TTCTTCTGCC CTGAGCCCAT GTAAGTTGTG
TGAACGAATA ATAACCCCGT GCCCTCGTGA AATAAGTTGG ATGCTGATGA TTCTCGACAG
GGGTAAAACG CTCGAGCAGA TGGACCAAAT CTTCCACTCC AACACGGCTC ATGAAGACAA
CCTCGCCAAG TCGGATATTC AAGCAGTCAT CCTGAACTCT CCCGTTGCTG GACCATTATC
TGGCACGGCG AGTGCTGAAA AGATCAACGA CAAGGATACT CAGCAGGAAT GGGTGGAGAC
TGTTTGATTG CGGGATTGCT TCCTTGGGCA GGGTTGCTTC CCGTCCTTGC TTTTGTATTA
CAAAGTAAAG GTGTGGAAAA GGTGTTGGAA GGTTGTTTAT TGGTATTATA TTTTTTTATC
ACTTGGAATT GGGGAATCAA AAGAATCTGA AAGGACCGTG TTGGAATACC GGTCTATGGT
TGTCATCATA CTATACATGG TTGAAATAAA TGT
|
|---|
| Protein sequence | MFFKKNSDAP KKPRHAPDRD DVPSLEDLGV ELHPDTARYV ADSQALADAI GGNGLKDIFS
SGLVLIAAFS TCMGGLLFGF DQGILSIVLT MSQFLGQFPD VDANVSSSAA FNKGIMTALL
ELGAFIGALQ AGFVADRYSR KKAIALGSVW FVIGAILQTT SYSFAQLVIG RFVGGLGVGL
LSAVAPMYIS EISPPNIRGS LLAMEAATIV SGIVIMFYIT YGSRYIPGDW SFRLPFLVQV
APCILLTIGL WKLPYSPRWL AQVGRDEDSL HALMRLRGFP VTDPRLQAEW ITIRAEAIQN
REVIVKAHPS LQGKDFMSEL KLEIASWVDM FKPKLIRRTI IGPILMMFQQ FSGINALIYY
SPTLFEQLGL DYEMQLDMSG VLNIIQLVAC VLAFFVIDRV GRRPLLLFGS TANTICHVIV
AVVMAKFSHD WVRYSKEAWV AVAFIFIYIF TYGVGWAPVP WAMPAEVHTS SRRAKGVAIT
TCANWLGNFI IGLITPPMLQ NIKYGTFLFF GAFTFLSGLY VWFFCPEPMG KTLEQMDQIF
HSNTAHEDNL AKSDIQAVIL NSPVAGPLSG TASAEKINDK DTQQEWVETV
|
|---|
| |