| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE02170 |
|---|
| Symbol | |
|---|
| ID | 3257826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006687 |
|---|
| Strand | + |
|---|
| Start bp | 586304 |
|---|
| End bp | 587169 |
|---|
| Gene Length | 866 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | 638256808 |
|---|
| Product | 60s ribosomal protein l21-a, putative |
|---|
| Protein accession | XP_570887 |
|---|
| Protein GI | 58267462 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2139] Ribosomal protein L21E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.771683 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AGTAATCCAT CAAGATGCCT CACTCTTTCG GTATGCGAGC GCGAACGCGC CACATGTTCA
GGAGGGGTTT CAAGGGTGCG TAGTGCTGGG TTACAAGAAC AGATGTGAAG CAGGGATGCT
GACGGTTTTT TCTGCGCTAT TTCACCATAA CTATCCATTT CGACCTGCCT TCAATCGAAC
TCTGCCTTTA TCTGTTGGAT GGACGGACTC GCATTTGCTG GGATTGTGTC GTTTGGGATG
TTTTGGCTTT TTTTGGCGAA TGATTGCAAT CTGTAGAGCA CGGTGCCCCC AGCGTCTCCA
CCTTCCTCAT CACCTACCGA GTTGGTGACA TCGTTGACAT CAAAGCCAAC TCTTCTCAGC
AGAAGGGTAT GCCCCACAAG TGTACGTTGA TCCTTATTTT CTGCATATTT TGATACTGAT
CTAATTTTTC TGTAATAGTC TACCACGGCA AGACCGGTAT CGTCTACAAC GTTACCCCCC
GAGCTGTCGG TGTGATCATC TACAAGGTCG TCAACGGCCG ATACATGGAG AAGCGTGTCA
ACATCCGAGT TGAGCACATC CGTCACTCCA AGTGCCGACA GGAATTCCTT GACCGTGTTA
AGTCCAACGC CGCCAAGAAG AAGGAGGCCA AGGAAAAGGG CGAGCAAGTT CTCCTTAAGC
GACTCCCTGC TCAGCCCCGA GAGGCCAGGG TTGTTTCCAT CCACAACAAC GTCCCCCAGA
CCCTTACCGC CAGGCCTTGT GAGTCGAAGA ACATCAAATT ACGGAGTGTC ACTAACAAGT
GCATCAGACG AGACCTTCAT CTAAACCGTT TTTGGATTGG AAGAGGTATT TGGAGAGCTT
GTACGATGGG ATGGATTGCA TACCAG
|
|---|
| Protein sequence | MPHSFGMRAR TRHMFRRGFK EHGAPSVSTF LITYRVGDIV DIKANSSQQK GMPHKFYHGK
TGIVYNVTPR AVGVIIYKVV NGRYMEKRVN IRVEHIRHSK CRQEFLDRVK SNAAKKKEAK
EKGEQVLLKR LPAQPREARV VSIHNNVPQT LTARPYETFI
|
|---|
| |