Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNE01990 |
Symbol | |
ID | 3257997 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006687 |
Strand | - |
Start bp | 535119 |
End bp | 537897 |
Gene Length | 2779 bp |
Protein Length | 582 aa |
Translation table | |
GC content | 51% |
IMG OID | 638256791 |
Product | hypothetical protein |
Protein accession | XP_570840 |
Protein GI | 58267368 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3469] Chitinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTAAATC TCCCTTCATC TCCAACCATC CCTCAACTCT CCCCCACCCC TCCGCCTCCA ATCTCAGCAG GCTGAGATTG TCCCCGGCTC ACGACCACTT GCGCAAAGCC ACTATTCAAC GTTTCCACGC CACTTGATTT TCTGCAAAAG CAAACCATTA CTGTCTAAAC CACCATGTAC TGCACCCTAG CAACACTTTC TCTCCTTGCT CTTGCCGAGG CGGCTGGCCC GCACAACAGG CGTCTCGACG ACCATCGACG ACATTATGCT CGCATAGCCC TCTCTGGCGA AAGCGAAACG CCCCCTTTGC CTCACAATCT CCACGTCGAG GTCCCAACCA AACGTGACGG GTGCACACAT GGTGGCTGGA ACTGTGTCGG CTTGCAACTT CAAAGTGAGT TGAATGATGA CCTGGGTTTT CATTGTTTGG CAGCAGGATG CTCGGTGTGG AACGATATGG ATCAAGGGAT ATGATCTAAC GCGTTCATTT TTAGGGTGCA ACTGGGGCGA CTGGATCGTC ATTCAGAACT GCACAGGCGA GAATATCGTC TGCTCGTGAG TCTTTTTATT TTTACTTTTT CACTGGGCTC TTTCGAGTCT TCAAACGTCA CATGCGTCTT GCTCCCATCT CCTCTTTTCT AGTTGTGGTT TGGTGGAAAA AAGCTGGCGC CCTTTGAGAC GATTTTGTGA TGCACAAAAA CTCTTCCACC CATCCAAAGC ACCAAAGCTC CTCCTTTTCG GTTCTCGGTT TCTGACACTT TGTTTTTCCG CAGGACACAA GAAGACGCCG TTGGATGTGT ATGGACTTGG TTTGTGGATG ACTCGACCAC ATCCCAAGGC GCTCAAGGTA CTCCTTCAGC CACCACTTCA CTGGTGTTTG ATGCGAGCAG TGCCGTCAGT GCATCATATG TCTCGGCAAC ACCATCACAA GGTCTTGATG ATGGTGAGCC GACTGGAACG GCTTCTTCGT ATTACGCCAC TGCTACGACC TCTACAACTG CTTCCGACAA AAATGATCAA GCCTGTGATG ATGATGATGA CGACGATGAC GAGGTTTGTG AGGACGAAGA CGCTTCTTCT ACCGCATCTG GTACCTTTAA CCCCGCCACC ATCACGTCTT CCGCCACTTT TTCAACGTCT GATGCGCAAG GAACTCTGAC TTCCCAGATT GGCGACGGGC TCTTGGCCGG GCATAAGAGC GAGTCTGCGT CAAGTAGCGA CGACTGGAGA GAGACTGCCG GCAGCGACCA CAAAAGTCGA ACCAAGCAAT GGGGCTCGTG GGGAACCTCT TCTGCTTCAG ATGGATCTGG TGAGTGTGAA ACGTTACGTA CCGAACTGCA CTTACGATAA CCCTAAGCGC CTACCACCAA TGCCTCCGTT TCCTACCCTG CGGCCACTGC CAGTTCTACT ACTACTGCCG CGTCATCGTC CCATTCAGCA CCTACCAACC TTGGCGGATG GTCAGCCCCT CACTATGTCA TCTATGCAGA CAGGTGGCTT AGCGCTATGC CCGACGTCTC TGAGCTCAGC TCTTTCAACC GCTTCATTTT AGCTTTCTGG GAATCCAATG GTGGAGCCGT TGACGATGTC CAAGCATGGT CGAGCTGGGA CGAAGGTTAC CGAAGACAGA TTATTGAAGA GTATCATGAT GCCGGTATCG CGATTATGAT TGCTGCCTTT GGGTCTACCG ACCAGCCGAC GACAAGCGGT GCGGATGCCA AGCAAGTGGC TCAAAAGCTC GCCAGTTTCG TCATGGAGTA TAATCTGGAC GGCGTTGATA TCGACTACGA GGGTAGGTCG TGGTAGAAAA AAAAAGGTCT TGAGACCGCG CGCTGACATG GGGTATGGGA TGTAGACATG TCGGCTATGA ACAGTGCTCA AGCGGTCTCT TGGATCGTCG AGCTCCAGAT GGAGCTCCGA AATCTCCTTC CGTCGCCATA CATCATCTCG CATGCGCCCG TTGCCCCCTG GTTCACTTCA GCGAATGACT ACTCTGATGG TTCTTATGTC TCTATACACC AGCAGGTTGG AGACTCGATT GATTTTTACA GTGTGCAATT CTATAACCAG GGCCCGGACC AGTATGTGTC CTGTGAGACT CTTATCACTG ATTCTGGGAG CGAATGGCCG TCAACTTCTG TGTTCGAAAT CAACTCTCAC GCCGGCGTGC CTCTCGATAA GATTGTGATT GGCAAGCCCC TTGAGCCTGG CTCCGCGTCC AATGGGTACG TCTTTTCTTT TCTTCACGTC TTCAACGCTG ATGATGTGGA TAAAAAGTTA TATGAGTGCT TCTGATCTTC ATCAGTGTGT CAGTGAGGCC AAGGAACGGG GGTGGAACGC AGGTGTCATG TTCTGGGAAT GGAGTGAGGA GGCGCCCTCT GTGATGGCTA CAGTCCGTGG GTGAGCATGG TGGTTCTAGG TTCCAGGTTC CAGTTCCCCG ATATCTCCCT GTGCAGGCCA CGGAGGGATT ATTGCGACGA ATGACAACGA CCCATACGAC TTAAGCTTGT TCCCAGTGTT GTATATCTGT CTACGACGAC TTGACTATAG GTATAATTTA CGTCAGTTCT TTTTTTCTGT ACCCTCTTAC CGAGGTCATC CGTGTTTATT TACCATCCAT ACACCTATAC TTTTTATCTA CTCTGACTGC TTTTTTTGTT ATAGTGGTCG CCTCCTGTTT CGCGTTTATT TGCTGCTGTA ATATCCGCCT GGGCGCGATG GATGAGCATG GATCTCGGGG AGAGGTCCGA GATGCGTATG GACGGGCGAT CTGGGATCG
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Protein sequence | MYCTLATLSL LALAEAAGPH NRRLDDHRRH YARIALSGES ETPPLPHNLH VEVPTKRDGC THGGWNCVGL QLQRCNWGDW IVIQNCTGEN IVCSTQEDAV GCVWTWFVDD STTSQGAQGT PSATTSLVFD ASSAVSASYV SATPSQGLDD GEPTGTASSY YATATTSTTA SDKNDQACDD DDDDDDEVCE DEDASSTASG TFNPATITSS ATFSTSDAQG TLTSQIGDGL LAGHKSESAS SSDDWRETAG SDHKSRTKQW GSWGTSSASD GSAPTTNASV SYPAATASST TTAASSSHSA PTNLGGWSAP HYVIYADRWL SAMPDVSELS SFNRFILAFW ESNGGAVDDV QAWSSWDEGY RRQIIEEYHD AGIAIMIAAF GSTDQPTTSG ADAKQVAQKL ASFVMEYNLD GVDIDYEDMS AMNSAQAVSW IVELQMELRN LLPSPYIISH APVAPWFTSA NDYSDGSYVS IHQQVGDSID FYSVQFYNQG PDQYVSCETL ITDSGSEWPS TSVFEINSHA GVPLDKIVIG KPLEPGSASN GYMSASDLHQ CVSEAKERGW NAGVMFWEWS EEAPSVMATV RG
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