Gene CNE01990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNE01990 
Symbol 
ID3257997 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006687 
Strand
Start bp535119 
End bp537897 
Gene Length2779 bp 
Protein Length582 aa 
Translation table 
GC content51% 
IMG OID638256791 
Producthypothetical protein 
Protein accessionXP_570840 
Protein GI58267368 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3469] Chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTAAATC TCCCTTCATC TCCAACCATC CCTCAACTCT CCCCCACCCC TCCGCCTCCA 
ATCTCAGCAG GCTGAGATTG TCCCCGGCTC ACGACCACTT GCGCAAAGCC ACTATTCAAC
GTTTCCACGC CACTTGATTT TCTGCAAAAG CAAACCATTA CTGTCTAAAC CACCATGTAC
TGCACCCTAG CAACACTTTC TCTCCTTGCT CTTGCCGAGG CGGCTGGCCC GCACAACAGG
CGTCTCGACG ACCATCGACG ACATTATGCT CGCATAGCCC TCTCTGGCGA AAGCGAAACG
CCCCCTTTGC CTCACAATCT CCACGTCGAG GTCCCAACCA AACGTGACGG GTGCACACAT
GGTGGCTGGA ACTGTGTCGG CTTGCAACTT CAAAGTGAGT TGAATGATGA CCTGGGTTTT
CATTGTTTGG CAGCAGGATG CTCGGTGTGG AACGATATGG ATCAAGGGAT ATGATCTAAC
GCGTTCATTT TTAGGGTGCA ACTGGGGCGA CTGGATCGTC ATTCAGAACT GCACAGGCGA
GAATATCGTC TGCTCGTGAG TCTTTTTATT TTTACTTTTT CACTGGGCTC TTTCGAGTCT
TCAAACGTCA CATGCGTCTT GCTCCCATCT CCTCTTTTCT AGTTGTGGTT TGGTGGAAAA
AAGCTGGCGC CCTTTGAGAC GATTTTGTGA TGCACAAAAA CTCTTCCACC CATCCAAAGC
ACCAAAGCTC CTCCTTTTCG GTTCTCGGTT TCTGACACTT TGTTTTTCCG CAGGACACAA
GAAGACGCCG TTGGATGTGT ATGGACTTGG TTTGTGGATG ACTCGACCAC ATCCCAAGGC
GCTCAAGGTA CTCCTTCAGC CACCACTTCA CTGGTGTTTG ATGCGAGCAG TGCCGTCAGT
GCATCATATG TCTCGGCAAC ACCATCACAA GGTCTTGATG ATGGTGAGCC GACTGGAACG
GCTTCTTCGT ATTACGCCAC TGCTACGACC TCTACAACTG CTTCCGACAA AAATGATCAA
GCCTGTGATG ATGATGATGA CGACGATGAC GAGGTTTGTG AGGACGAAGA CGCTTCTTCT
ACCGCATCTG GTACCTTTAA CCCCGCCACC ATCACGTCTT CCGCCACTTT TTCAACGTCT
GATGCGCAAG GAACTCTGAC TTCCCAGATT GGCGACGGGC TCTTGGCCGG GCATAAGAGC
GAGTCTGCGT CAAGTAGCGA CGACTGGAGA GAGACTGCCG GCAGCGACCA CAAAAGTCGA
ACCAAGCAAT GGGGCTCGTG GGGAACCTCT TCTGCTTCAG ATGGATCTGG TGAGTGTGAA
ACGTTACGTA CCGAACTGCA CTTACGATAA CCCTAAGCGC CTACCACCAA TGCCTCCGTT
TCCTACCCTG CGGCCACTGC CAGTTCTACT ACTACTGCCG CGTCATCGTC CCATTCAGCA
CCTACCAACC TTGGCGGATG GTCAGCCCCT CACTATGTCA TCTATGCAGA CAGGTGGCTT
AGCGCTATGC CCGACGTCTC TGAGCTCAGC TCTTTCAACC GCTTCATTTT AGCTTTCTGG
GAATCCAATG GTGGAGCCGT TGACGATGTC CAAGCATGGT CGAGCTGGGA CGAAGGTTAC
CGAAGACAGA TTATTGAAGA GTATCATGAT GCCGGTATCG CGATTATGAT TGCTGCCTTT
GGGTCTACCG ACCAGCCGAC GACAAGCGGT GCGGATGCCA AGCAAGTGGC TCAAAAGCTC
GCCAGTTTCG TCATGGAGTA TAATCTGGAC GGCGTTGATA TCGACTACGA GGGTAGGTCG
TGGTAGAAAA AAAAAGGTCT TGAGACCGCG CGCTGACATG GGGTATGGGA TGTAGACATG
TCGGCTATGA ACAGTGCTCA AGCGGTCTCT TGGATCGTCG AGCTCCAGAT GGAGCTCCGA
AATCTCCTTC CGTCGCCATA CATCATCTCG CATGCGCCCG TTGCCCCCTG GTTCACTTCA
GCGAATGACT ACTCTGATGG TTCTTATGTC TCTATACACC AGCAGGTTGG AGACTCGATT
GATTTTTACA GTGTGCAATT CTATAACCAG GGCCCGGACC AGTATGTGTC CTGTGAGACT
CTTATCACTG ATTCTGGGAG CGAATGGCCG TCAACTTCTG TGTTCGAAAT CAACTCTCAC
GCCGGCGTGC CTCTCGATAA GATTGTGATT GGCAAGCCCC TTGAGCCTGG CTCCGCGTCC
AATGGGTACG TCTTTTCTTT TCTTCACGTC TTCAACGCTG ATGATGTGGA TAAAAAGTTA
TATGAGTGCT TCTGATCTTC ATCAGTGTGT CAGTGAGGCC AAGGAACGGG GGTGGAACGC
AGGTGTCATG TTCTGGGAAT GGAGTGAGGA GGCGCCCTCT GTGATGGCTA CAGTCCGTGG
GTGAGCATGG TGGTTCTAGG TTCCAGGTTC CAGTTCCCCG ATATCTCCCT GTGCAGGCCA
CGGAGGGATT ATTGCGACGA ATGACAACGA CCCATACGAC TTAAGCTTGT TCCCAGTGTT
GTATATCTGT CTACGACGAC TTGACTATAG GTATAATTTA CGTCAGTTCT TTTTTTCTGT
ACCCTCTTAC CGAGGTCATC CGTGTTTATT TACCATCCAT ACACCTATAC TTTTTATCTA
CTCTGACTGC TTTTTTTGTT ATAGTGGTCG CCTCCTGTTT CGCGTTTATT TGCTGCTGTA
ATATCCGCCT GGGCGCGATG GATGAGCATG GATCTCGGGG AGAGGTCCGA GATGCGTATG
GACGGGCGAT CTGGGATCG
 
Protein sequence
MYCTLATLSL LALAEAAGPH NRRLDDHRRH YARIALSGES ETPPLPHNLH VEVPTKRDGC 
THGGWNCVGL QLQRCNWGDW IVIQNCTGEN IVCSTQEDAV GCVWTWFVDD STTSQGAQGT
PSATTSLVFD ASSAVSASYV SATPSQGLDD GEPTGTASSY YATATTSTTA SDKNDQACDD
DDDDDDEVCE DEDASSTASG TFNPATITSS ATFSTSDAQG TLTSQIGDGL LAGHKSESAS
SSDDWRETAG SDHKSRTKQW GSWGTSSASD GSAPTTNASV SYPAATASST TTAASSSHSA
PTNLGGWSAP HYVIYADRWL SAMPDVSELS SFNRFILAFW ESNGGAVDDV QAWSSWDEGY
RRQIIEEYHD AGIAIMIAAF GSTDQPTTSG ADAKQVAQKL ASFVMEYNLD GVDIDYEDMS
AMNSAQAVSW IVELQMELRN LLPSPYIISH APVAPWFTSA NDYSDGSYVS IHQQVGDSID
FYSVQFYNQG PDQYVSCETL ITDSGSEWPS TSVFEINSHA GVPLDKIVIG KPLEPGSASN
GYMSASDLHQ CVSEAKERGW NAGVMFWEWS EEAPSVMATV RG