Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNE01880 |
Symbol | |
ID | 3258011 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006687 |
Strand | + |
Start bp | 511393 |
End bp | 513846 |
Gene Length | 2454 bp |
Protein Length | 493 aa |
Translation table | |
GC content | 47% |
IMG OID | 638256778 |
Product | transmembrane transporter Liz1p, putative |
Protein accession | XP_570819 |
Protein GI | 58267326 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.810548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCAATTTAAA ACTCGCAGGA CCTCCTTCGG CGCCCCTTCG GACTTGGTGT CGCCTTCCAA TGGCAGCGAA GGATCGAGAG AATCGGGAAA GAACGAATCC GACAATTAGC CAGCTCGCCT AAATATTCTC CAAGTTATAC GACGAGGAGA TTCAACGCGA AAGCGAAAAG CCGAGGTCTT CTGTTGACGG ACGGCGGACA GATACGATAG CCACGAGAGA TAAGGGTGTG AACAGGCTCA AACAAGATTG GGTAGCGGGG AAAGCATATA CATATTACAG GACGTTCTCC TGTGTAAACG ATCACCCAAT CTCAACTTTT GTAACCGTAC AGCCTCTAAC AGTCGTTCTC TGATTGACAA GAAACAAGAG GCAAGCCAAC ATTAGAGGCA TATTCACCCA ATGAGTTCAT TGAGCAAATT CCAGGTCAAA CTGGAGACAA TATTTTGGGG GAAGCCTCCT GCAGACCCAA AAGAACGTAA GCTTTTGCTG AAATTGGATC TGGTTATCTT GACCTATGTC TGCTTGTCTT GTGAGCCTTT TCTACGTGCA ATGGAGATAG CGACTGATAT CAGGCCTTCC CAGATTTCTG TAATTGTGAG TGGGACGAGC CGATCCACTG AAACCTTCGT GCCACTGCTT ATCGGGAGCC ATACCAGATC TGGACAGAGC GAATCTTGCC AATGCGGTAC GCCACAAGTT TGACTTACTG TTAATATAGA CTGACAAACA CATCTAGTAC ACTACCGGCA TGAGAGAAGA TGTAGGCTGT GAGTGCTGAA TCCGTGACAC AGAAGGACAT GATCATGATT GACAATTCTG CAGTCAAAGG TAACGACTAC ACCTACGCGA ATTCCATGTT CACGGCTGGC TATATTATTG GTCAATGGCC CTCTGCGCTC ATTCTCTCTT CTGGCCGCAT TTCACCAAGA TTCTGGTTCC CTTTTTGCAT GCTAGCTTGG GGGCTGTGTA CTCTTGGTTT GACCTGTGAG CGTCCATCCA AATTCGGGTC AAACAAGCAC TGAAATCAGC AGGGGTCAAA ACTCCTCATC AGGTTTGGGG CATTCGATTT GTGCAAGCAT TGTTTGAAGC ATCCACGTTC AGTGGTACCC ATGTATGTGC TTTTCCTGTA TAAGCGTGCA TGGGGCAACC GGCTCACCTA TGCAGTATAT TCTTGGCTCC TGGTATAAAA ACGGGGAGCT GGGTAAGCGT TCCGCCGTCG TGAGCCCTAT TCCTCATGAA TAAGCCTCCT CAGCTAATAA TCATTAGTTC GCAACTGCTG CTCAATGCGG CACCTTGTTT TCTGGCATTA TGCAAGGTGC AATCATGACC AATTTGGACG GCAAAAACGG GTTCAAAGGT TGGCAATGGC TGTATATTAT TGACTTCATT ATTACTATTC CAATTGGTAA GTAGACACTT TACGGTGCGC CCACTGCATG CTGACATTTG TGTAAGCTAT CTACGGTTTT TTGATGTTCC CTGGTACCCC CCAAACTACC AAGGCTTGTT AGTGCAATTG TTCGCATTAT TCAACGGGAT GAACTAACCT GACAATGCAG TCTGGCTTAC TGAAGAAGAA CGAGAGCTCT GTGTTCAACG TTTGCCTCCC GCCGAACATC ATAAAATGAC TCTTAAAAGC TTAGGCAAAT CCGTCAAGAG GCTCGTTACC ACGTGGAGGT GGTACCTATT CACTCTTTTA TTTACCGTGT CAGCCACAGC ATTCGAGAAG GTCGGGGTAT ACACAGAGTT TAACTTGTGG CTTAAGGCTG CTGGATACAA CGCTAGCCAG AGTATGTCAC CATTTTCAAG TTAACAGTAA TTTGAACACT AACCGAAAAG TAGTTTCTTA CTATCCCTCT ATCTTTACTG CAACTGCCAT TGTATCCACT TATTTCCTCA CTGTTATCTC CGATGTTACC CGCAATCGCT TCGTCATTAA CCCTATAATG TATCTGGCCG TCTTCATCTC ATCGGTGATG CTCCTCAACT GGGACCACCT CAACAAAGGT GCTCATTGGT TCGCCTACAT CATCGGAGGC TTTGGCTACG CGGGGCAAGC AAGCAATTTT GCTTGGGCGA ATGAGATGTG TAGGGATGAC GATGTGGTGA GGTCGTTGAC TCTATTTTCC ATGAACTGTA AGCATATCCA ATTTCAATTC CTGGCTTAGC TGATCCGCAT ATTAGTGTTC TCTAGCGTTT GGAATCTGTG GTATCAGATT GTGGCCTGGC CTGTTGTCGA AGCACCCCGT TTCCGAAATG GCCAAATTGC CACTTTGGTC ACGGGTGCCG CATCCGTTGG TATTGCCGTC ACCATTGTCT ACTGCTCCAA AAAGTGGCCA CCTGCTATTG CCAATGCGGA ATTGGATCAT GAACGTGAAA GTGTAGCTGA AGGCGAGAAG AGTACAAGTA AGGACGAAGA GGCAGGAGTC AGCGTTGAAG GCGTCGCTCA TTAG
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Protein sequence | MSSLSKFQVK LETIFWGKPP ADPKERKLLL KLDLVILTYV CLSYFCNYLD RANLANAYTT GMREDVGFKG NDYTYANSMF TAGYIIGQWP SALILSSGRI SPRFWFPFCM LAWGLCTLGL TWVKTPHQVW GIRFVQALFE ASTFSGTHYI LGSWYKNGEL GKRSAVFATA AQCGTLFSGI MQGAIMTNLD GKNGFKGWQW LYIIDFIITI PIAIYGFLMF PGTPQTTKAF WLTEEERELC VQRLPPAEHH KMTLKSLGKS VKRLVTTWRW YLFTLLFTVS ATAFEKVGVY TEFNLWLKAA GYNASQISYY PSIFTATAIV STYFLTVISD VTRNRFVINP IMYLAVFISS VMLLNWDHLN KGAHWFAYII GGFGYAGQAS NFAWANEMCR DDDVVRSLTL FSMNLFSSVW NLWYQIVAWP VVEAPRFRNG QIATLVTGAA SVGIAVTIVY CSKKWPPAIA NAELDHERES VAEGEKSTSK DEEAGVSVEG VAH
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