Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNE01650 |
Symbol | |
ID | 3257480 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006687 |
Strand | + |
Start bp | 461884 |
End bp | 463813 |
Gene Length | 1930 bp |
Protein Length | 429 aa |
Translation table | |
GC content | 46% |
IMG OID | 638256755 |
Product | conserved hypothetical protein |
Protein accession | XP_571227 |
Protein GI | 58268142 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1467] Eukaryotic-type DNA primase, catalytic (small) subunit |
TIGRFAM ID | [TIGR00335] DNA primase, eukaryotic-type, small subunit, putative |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ACAAGATGCC CGTCCCAGTC AGCGAGAAAC CGTGAGTGTC AACCAGTTGT CCAATTCAGA ATAACAGAAG TGCTGATTAA TCGCCTCAGA ATGGTCGAGT ATGAGTGAGT TCCTTGATCA GTACAAAACG CCCGTCAGAC TCTGACTGTC TGCCAGTGCA TCTAGCCCGC AGGTTATGCA GCTCTTCTAC AGGCGTCTGT TCCCTTACCG CCCGCTCTAT CTTTGGCTGA ATCAAGAACA GAGTAAGTCT TACCGCCGTG CAGGCTTCGA CAGCGGAATT GACACGGATT TAGTACCCAG CAAGTTATTC ACCCATCGTG AATTCGCTTT CACATTGGCA GGAGACGTCT ACCTTCGATA CCAATCTTTC AACAATGTCG ATGAATTTAA AGCTTCTATT GCCAGGCATA TTCCATCACG TTTTGAGATT GGCCCTCAAT ATAGCGCAAG AGTATGTCCA TGCTACTGAT ACAGCGTTCC TCTGCTGACG CTGGATACAG CCGAAGGACA GGAAGACGCT TGCCTCTGGC GCTCTTCAAC CACAGAGGCG AGAGCTCGTT TTTGATATTG ATATGACCGA TTACGATGAG ATCCGAACGT GTTGCACGGA TAAGACTATT TGTAAGCGAT GCTGGGGCTT TATTGCCGCC GCCGTAAAAG TGCTGGATCA TTCTCTCCGA GGTAGGTTGT CAATTGGCAT TTAAACCATG CGGATAGTTT TCTTATTAAT CTATATAGAA ACATTCGGCT TCAAGCATCT CTTATGGGTG TACTCTGGTC GACGAGGTAT CCATTGCTGG ATCTCTGATC AGTCGGCTTT GGATCTCACC GATGATCAGC GACGAGCGTT GGTTACTTTT TTGGAAGTGA TAAAGGGTGG CAAAGAACAA AGCAAGAAGG TCAATGTGAG AGGACCAACT GGTGATGCTG CCCTCCATCC TTTCTTGTCG TGAGTTGGAC CATCGTGTAA AAGGTCTGTG GCATTACATA ATTAACCCCA ACCATAGTGA AGCACTCGAT ACCCTCAAAC CATTATTCTC TAGCCTCTGT ATCTACGACC AGGATTGTTT CAAGGGAGAA AAGGGATGGG AAGCGTTGCT TGCCATTTTG CCGACTGATA GAAGTGAGCA GTATTCGTAA ATTTGGTGGA TTAGACACTG AACATTTACA GCTGTCATTG GACCACTAAG GGCCAAATGG GAAAAGAACT CGGATAGTTC AAGCGAAGAA AAATGGCGGG AACTTATGAG CGAGATTGCA AAACATAAGA AAGAGGAGGC AATCATGGTA TGTGGTATAA AATTTACTCG AATTCATCGC TGACTCACAT TTATTTGCCC CTCTAGACCA AATTCACAAA AGCAGTAGAA GACGTCGTCT TACAATACAC CTATCCGCGT ATCGATGCTG AAGTTTCCAA GCATCGTAAC CATTTGCTCA AGTCTCCGTT TTGTGTTCAT CCCGGTACCG GTACGTTGAA GGAATTCTTC CGTCGCTTCA TCCAAACTAA TACAAGTCAA GGTCGAGTTT GTGTCCCTAT AAACCCGTCT CTGATCGACG AATTTGATCC CGATACAGTG CCCACTGTCG GTCAATTGCT GAATGAGCTC GACAATGTAA AGGCTGAGGA TTCTGAAGCT GCTGGCCGGC GTATGGAAGG TAAGTTTTCT TTCCAGGCCA TATCTTTTCT ATATCTGTAC TGATGAAATG TGCAGACTAC GAGCACACTT CACTGGGACC TTACGTGGAG ATGTTTGAAA AGCATGTTGC TGCAGTCCTG AGGGATGGTC GGAATGCGAA AAGAGGTAAG TTAGCTGATA TATAGTCTAC GGATTTCAAG CTGACACCCT TCATAGCTGC CAAGGCAGAG AGTTTGGATT TCTAGAATAC CAGGCTTTCA TTTGTTGTAT TATATGCATG TTTAACTGTC
|
Protein sequence | MPVPVSEKPM VEYDASSPQV MQLFYRRLFP YRPLYLWLNQ EQIPSKLFTH REFAFTLAGD VYLRYQSFNN VDEFKASIAR HIPSRFEIGP QYSARPKDRK TLASGALQPQ RRELVFDIDM TDYDEIRTCC TDKTICKRCW GFIAAAVKVL DHSLRETFGF KHLLWVYSGR RGIHCWISDQ SALDLTDDQR RALVTFLEVI KGGKEQSKKV NVRGPTGDAA LHPFLSEALD TLKPLFSSLC IYDQDCFKGE KGWEALLAIL PTDRTVIGPL RAKWEKNSDS SSEEKWRELM SEIAKHKKEE AIMTKFTKAV EDVVLQYTYP RIDAEVSKHR NHLLKSPFCV HPGTGRVCVP INPSLIDEFD PDTVPTVGQL LNELDNVKAE DSEAAGRRME DYEHTSLGPY VEMFEKHVAA VLRDGRNAKR AAKAESLDF
|
| |