| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE01460 |
|---|
| Symbol | |
|---|
| ID | 3257608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006687 |
|---|
| Strand | - |
|---|
| Start bp | 399244 |
|---|
| End bp | 400897 |
|---|
| Gene Length | 1654 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638256734 |
|---|
| Product | expressed protein |
|---|
| Protein accession | XP_571122 |
|---|
| Protein GI | 58267932 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5052] Protein involved in membrane traffic |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TGCGTCGACT GACTATCATT TCCCCTCCAT TGACGCTGCC CATAACTCTT ACAGGACTCT
CATACACTTG CTGACCCATT TTTCGCTATG GTATTCGGCC TTCTCTGCAG GTGGGCATGG
TAAGTGGCGG CACTCCATTT TCCGCTGTTA GCATGTCGCA AACAGTATCG ACCATCAACC
GCCACGGCTA ACTCACTACC CACAGTAACA TTTGCTCTTA CCTATACCCA GCATATGCAT
CCTACAAGGC ATTATCTATC CACCCAGAAA GCTCACCCGA AGCGATGGCT CAAGTGGAGA
GATGGTTGAT GTACTGGGCA GTGGTTGGGA CTTGGACAGC TGTTGAAGCT ATAATCGGGT
GGACTATTAC ATGGTAAGTG TGACGGCCTG AAAGTTTCTG ATGGTGCCAA CGTTTAACTA
TCTAACCGGT TTTTAATGAT CCCAGGATGC CGTTCTACAG TCTTATTAAG ACTTTTGTGT
TCCTTTCTTT GTCGTTGCCA CAATTTGAAG TAAGAAGGAC CGTATTACAA GTATATTCGG
GAAATCCGCT GATTCGTTCC TTCATCTTTC TGGGCACAGG CCTCCACATA TATCTACCGT
TCTCATCTCT CACCATTTTT TCAGGAGCAC GAGCAAGACA TCGATGCCTT CCTCGCTTCT
TCACGCAGTC GCGCAGGCTT TGCTTTGGTG GAAAGCGTGG GTTGGATTTG GCAAAAGGCA
AAGGTTCAGC TCAACGTAAA TCTCTTCTTC CTCATATTAT ATCTCTTAAG CTCATTCATT
GGAACAGATT ACGTTGCCTG ATGAGCAGCT TCAAGCGGCT GCCATGTTGG CTCAAAACCA
AGGTCAAGGC CGACCTAATG AAGGAGGTTA TCCTGCTCAG GATGTGCACC AACCTCCTAC
TCTTTCTGAC CCTGCGTCCG GTGCTCTTCA GACGGCGTTG CATTTTGTTT CAAATTATGC
TGGGAGGTGT GTATAATCTT AGATCGCATT GGATGTGGGA ATCATTTTCT AACCGAACAT
CAGATACATG CCGGTTGCCC TCACAGCCCT TTCCGCTGCG GCAGCTTCAG CTAAAGGGCA
AGCTGGCGAA TCTCAAGGAG GCGCCTCATC AAGTATCACA CCACAATCCC GTGCGACTCA
GATGCCTCAG CAGATGACCA TGCCCGTCCC TGTCCCGACT CCTCCTGTCC ATCAGCAGCA
ATCTGACCCC TCTTTGCGTT CCCGCGCTTT TATGCACGCA TCCAGCAATA ACAGTGCAGG
CCAATATCCA AGCCTGAACA ACCTCAAGCA GCAACAACAG TATCAAGCGC TTAGCTCCGC
TAGGTCTCCT CCCCAAGGCT TTTCGGGCAG ATCCGCATCA GGTCCTGCAG GTCCTGCACG
GATGTCTCAA TCCTCGTCAC GCAGTTCAGA TGAGTCTCTC GGCTCCAGAT ATGAAGGATA
TGAGCAAATT GGGAAGGACG AGCTACAAGA AATGAATAAC TCCAGGTCAC GGATGCAGGG
AAAGAAGAAT TGGTTTGGAT GGGGTGGACC CGCTGGCATG AATGATGACA GGGATGACAG
GGATAAGATC GACTAAGGCC TTCCTTAACG TGTATGCTTG CGAATGCTTT ACGCGCCTTG
CTCAGTGTAT TTACAATAAC TCCTGTATCT CAAT
|
|---|
| Protein sequence | MVFGLLCRWA CNICSYLYPA YASYKALSIH PESSPEAMAQ VERWLMYWAV VGTWTAVEAI
IGWTITWMPF YSLIKTFVFL SLSLPQFEAS TYIYRSHLSP FFQEHEQDID AFLASSRSRA
GFALVESVGW IWQKAKVQLN ITLPDEQLQA AAMLAQNQGQ GRPNEGGYPA QDVHQPPTLS
DPASGALQTA LHFVSNYAGR YMPVALTALS AAAASAKGQA GESQGGASSS ITPQSRATQM
PQQMTMPVPV PTPPVHQQQS DPSLRSRAFM HASSNNSAGQ YPSLNNLKQQ QQYQALSSAR
SPPQGFSGRS ASGPAGPARM SQSSSRSSDE SLGSRYEGYE QIGKDELQEM NNSRSRMQGK
KNWFGWGGPA GMNDDRDDRD KID
|
|---|
| |