| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE00800 |
|---|
| Symbol | |
|---|
| ID | 3257491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006687 |
|---|
| Strand | + |
|---|
| Start bp | 210286 |
|---|
| End bp | 212057 |
|---|
| Gene Length | 1772 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638256666 |
|---|
| Product | vacuole protein, putative |
|---|
| Protein accession | XP_570806 |
|---|
| Protein GI | 58267300 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5273] Uncharacterized protein containing DHHC-type Zn finger |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.714607 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGAAATC ACCTCTGCAT CAAACTCACT TGCGCCGACC AAAAGCCAAA ACAAGGTGCT
CTGGACGACA GGCGCTACTT GCTGGATTGC AATGTCGCTC ATACGCAATT GCTCTGGCGT
GGTCATCCGG TGCTTCAAAC ATGTTGAATA CTTTGCCGAT TGGTTAACGG GCGCCGCTGG
TCCTGTTTTT GTCTTCTTAT GCTGGCTTTT GATAGGCTCT GGGGGTGTTT TGTTCTGTAA
GTCTCCCTCA AAGTCTGGAT GAGATCAAGC TAAATATTAC TAGTCGATGT TGTTGCTCGA
GACCTCTCTT TTCTTTCCCT TCTTCTCCTT TCACCTCTCC TCATCCTTGT CCCTCTCAAT
CTCTACCTCC AATACTACCT CGTTACCCAC GTTCCCCCTG GATTTCCAGC ACCTCGTGCA
TCGGGACCTG ATGAAAATAT GAGCTGGATT GTCCCTGATA CCAAAAGTAT ATGGGCGCCG
GAAAGGTGGG GGTTCAAGAA GATGGTTAGG CCCTTAACCA GCAGCGGACA GCCAGAGGGG
GCGGCAGAGA CTGGAAGGAG GGTGAGACGA TGTAGAAAGT GTGACGGACC TAAACCAGAG
GTGAGCTTCT CCATAAGGAA AAACCCTCAG GTCGAATGGC TCATTAACTT CATTCGTACA
TCTAGAGAAC ACACCATTGC TCGGTATGTA AAAGATGTAT TCTAATGATG GACCATCACT
GCCCCTGGAT AAACAATTGC GTAAGTTGGG AAAGGAAAAA GCTTGTGAAT AAAGCATCTA
ATAAGTGTCA AAACAGGTTG GCCTACATAA CCAGCGGCAT TTTGTTCTGT TCATGTGTGT
TATCTAAAGC CGTCAATGAC CATTTCGCTA ATAGTGACCT CTTTTTTAGG GCGTGGTTAT
CAATAGGATG TTGGGTGGCG GCAATCCTCG GGTATCATCG GTTCCTCGAC ACCTTCAAAT
ACCATTCCGA AGTACGTATA TGCGCCAATG AAACGAGCAT TTGCTTACCC TGTCCCTTGA
AATAGTGGAA CTCATGGACA CCCAAGCTGG GATGGACCAT CATTTGGGTT CTTGCTGTCG
CCATAGGTGA GCCTAGCCTT TCGTCATATC GTTAAACGTT AACGTCTTTA TGTGTCAGGT
ATTGCTGTAC CAGTTTTGAC ATTGTGGCAT TTATATATGG TATCAAATGG GGAGACATCG
ATCGAGTCTC ACGATAACGC CTACCTCGCA TCAAAAGCAA AGTCTGAGGG TCTCGTACGT
ACCTTACGAT GTCCATTAAT TTTGCATCAA CTGCTAAATG AGTTGTAGAT TTACTTAAAC
CCCTATGATC TCGGAAGACG GCGTAATCTT CAATTGTTTT TCAACCTCGG TCCAGGGGGC
TAGTGAGTTT TTAAACGTAC TACTTTATTT GCCCCGTTAA CAGAATCCTT TACCAGCTCT
GCCACCACTC TTCTCTTTCC CTTCCTTATT TCCCCAGCCA CAAACGGCTG GTCCTTCTAT
AGACGTCCCT TACCTACCCA TCCATTAGCA TCCATGAAAG AACTCCACGC CCCCGAACTT
GGCGAAGGGC TCATCGCACG TACCAACACT TCGTCTGGGC GTGGCTTGGG ATTGGGCTTA
GGACTGGATG TAGGTGGCGA TGTCGGCAGT CATGCGGAGG ATGGATTAGG AGGGTATGTT
ATGGGTGATG ATGGGAGTCT AACAGACGAT GAGGAAGGAG GAGGTGGGTA TATGGACTAA
TCATTGATGT CAAACCTTTA TGATCCTATT CA
|
|---|
| Protein sequence | MSLIRNCSGV VIRCFKHVEY FADWLTGAAG PVFVFLCWLL IGSGGVLFFD VVARDLSFLS
LLLLSPLLIL VPLNLYLQYY LVTHVPPGFP APRASGPDEN MSWIVPDTKS IWAPERWGFK
KMVRPLTSSG QPEGAAETGR RVRRCRKCDG PKPERTHHCS VCKRCILMMD HHCPWINNCV
GLHNQRHFVL FMAWLSIGCW VAAILGYHRF LDTFKYHSEW NSWTPKLGWT IIWVLAVAIG
IAVPVLTLWH LYMVSNGETS IESHDNAYLA SKAKSEGLIY LNPYDLGRRR NLQLFFNLGP
GGYSATTLLF PFLISPATNG WSFYRRPLPT HPLASMKELH APELGEGLIA RTNTSSGRGL
GLGLGLDVGG DVGSHAEDGL GGYVMGDDGS LTDDEEGGGG YMD
|
|---|
| |