Gene CNE00560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNE00560 
Symbol 
ID3257889 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006687 
Strand- 
Start bp149724 
End bp150887 
Gene Length1164 bp 
Protein Length240 aa 
Translation table 
GC content53% 
IMG OID638256642 
Product3,4 dihydroxy-2-butanone-4-phosphate synthase, putative 
Protein accessionXP_570768 
Protein GI58267224 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.145417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGTC CGAGCCAAGT ATCCAACCCG CCCACGGCCC CTCCTACTCC CTTCCAGTTT 
GACCCCGTGC CCGATGCCAT CGAAGCTATC AGGCGCGGGG AGTTTGTAGT CGTCATGGAC 
GACGAAAGCC GTGAAAACGA AGGAGACGTC GTGTGTGCTG CCTCTGCCGT CACTACAGAA 
GGCATGGCAT GGATGATCAA GTGGACAAGG TGTGTGTTCT TTATCCTTTA TTATTCAAGC 
CGAGAGAGTG AGAAGCCACT GACCATGTCT GAATCGACAT CAGCGGCTAC ATCTGCCTCT 
CCCTTCCTCC GTCCCGACTG AAAGCACTTC AACTTCCCCC CTCTCTCCCT CCTTCTGGCG 
TATCCCAAGA CCCCAAGGGA ACAGCATACC ACCTCACCGT CGACTCGGCT CCCGGACGTC 
ATCCCGTTTC CACCGGTATC TCCGCCCACG ATCGAGCGTA CACCGCCCGG TTGCTCGCGG 
ATCCCAAGAG CGATGAGAGC GATTTTACAA GGCCGGGACA TATGGTTACC CTGAGGTATG 
CAGTAGGCGG GGTGAGGAAG AGGAGGGGAC ATACAGAGTG TGCGACAGGT ATGTCCCTCT 
TTCCCGTTCT CTCTTTCCAC CTCTCGCTCT TAGAGGGGTA GATCTCCTTT TTTTTTTTTT 
TGTGTATTTG GTCCGTACCG CCGGAAACAA CCATCTTTCC GGTAGATCTG TACATACACT 
AACTCGACTC AGATCTCTGC TACCTCGCCG GCCTCCCACC CGCTGGCCTC TTATGTGAGC 
TCGTCAACCC CTACGACCCT GCAGGATCCA TGGCAAGACG AGATGATTGC TGGAGATTTG 
CAAAGGAGTG GGGATTGAAG ATTATCAGTG TGGAAGGGTT GGCAGAGTAT GTGTTGAAGG 
AGGGCAAGCA GCTCGTGCCC GAGGAAGAGG CCAAGGCATA AGGCGGGGTT TCCTATCAGT 
ACAGTAGACC GTGTCTCGCT GGGTACATAT AGGGGGGTAC GGTGGGCTGT CTTGCATTTA 
TCAAAAATAA AAAATAAAAA GAGAGAATCG GAAAAGAGTT GCTGGTCATG TCTCGTACGG 
GCAGCACAAA GAGGTTTCCT GCATGTGGCC ATCCATCTCT TTTCGTTATC TTTTTACCAG 
TACTTGCATT TATTTGCATA GCAG
 
Protein sequence
MSRPSQVSNP PTAPPTPFQF DPVPDAIEAI RRGEFVVVMD DESRENEGDV VCAASAVTTE 
GMAWMIKWTS GYICLSLPPS RLKALQLPPS LPPSGVSQDP KGTAYHLTVD SAPGRHPVST 
GISAHDRAYT ARLLADPKSD ESDFTRPGHM VTLRYAVGGV RKRRGHTECA TDLCYLAGLP 
PAGLLCELVN PYDPAGSMAR RDDCWRFAKE WGLKIISVEG LAEYVLKEGK QLVPEEEAKA