| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE00510 |
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| Symbol | |
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| ID | 3257704 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006687 |
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| Strand | + |
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| Start bp | 132574 |
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| End bp | 136701 |
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| Gene Length | 4128 bp |
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| Protein Length | 1045 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638256636 |
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| Product | DNA repair protein rad16, putative |
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| Protein accession | XP_570757 |
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| Protein GI | 58267202 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.17517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCCTCCCAAC CTCTCTCCTC ACCTCTTCCA CAGGATGCCT GCTCTCCGCT CAACCCGAAA
ATCAGCGCAA AACCAGCCAG AAATGGCTGT TATTGACTCT GTCGGCCATT CAAGGACCAA
TAACGCTGTT TCTATCAAAG CTCAAAGACA ATCAACAGTC GAGGTGTCGA TACCAACTCG
CAGGACGAGA TCATCTACCA GCAATACTGC ATCTTTAGTC CCCAATGGCG TTGATCGGGA
TGAAACAGAA GATGAAGATT GGGCCGATGG CGATGTCAAC GTGGGTGGCA AATGGATCTT
CACTCCATAA AGTTGACGCT GATATTCAGG ATTAGATGGA GAATGGCGAT TCTGACATAG
AGTTAATAGA AGATCAGAAG CCACAGATCA ATGGCGTCAA CGGTAAAGGC AAAGGCAGAG
CGAAAGAACA AGCCCAGCCC TTCAACATTG GTAAATACAG TCGTGTCGCC AAAGCTTCCG
TAACCGATCT CAAAGAGGAC ACGCGAACCT CTGGTCGCTC ATCGAGAGCA CCACGTCGTA
GTAAATCACA AGCATCAGTA AAGATTGAGG AACTTGATGG CGATTCAACG GAGTCTGAAT
TTGTGGTTGA CGGTGGAGGG TATGCGATGG ATAGCGAGGA TGAAGCCAGA CAGCTCAAGC
AGGCCATCCG TGCATCTAGT AGCAAAGCGG CGTCTTCCAA GGGGAAGAGA ACCAACCATG
TTGCTTTGAA TGCTGCTTTG GCTCGTATAG CTGGAAGTAA GCCATCCCCT ACATTCGTTT
CACGTCAGTC ACTGACTTTT GTGTAGAACG GAGCGGCCAG TCGTCAACTG CTACCGACAC
AGCCAATGCC ACTCCTCTCT CCGATGATGA TCCCGTCCCC TCTGATTCTG AATTTGAAGA
GGCTGAAGAA CAAGGCAGCG ATCTATCCGA TTTGTCAACA TCCGATTCTG AAGTTGAAGT
GCCGCTTTCT CGCGGAAAAG GTAGCATGCG AGGAGGTCGA GGAGGAGCTC AAGGTAGTAA
AGCTGCTAGG CCCTCCGTTG CCAAGGGAAA AACAGCTGCC AAAGGAAAAA CCAAGAAATT
CCAGGGCAAA GGCCGCAAGC TAGGTGGTTC TGATTCAGAA AAAGAGGAGG AATTCGACGG
AGCTGAGGCC CTTTCCGATG AGGATGAATC CTTATCTGAG CTTTCTGATC CCAATATGTC
ATGGCTCGAA AAGAGGCAGA TGCAAAAAAG AAAGGAGAAG CGCCATGCCG CAAGGGAGGC
GGCGCCTAGG AAGAAGAAAG AGCGAGAGCT AGCAAAGAAG TTGGGGAGGA AGTTGACGAA
CGGGGAGAAG AACCTCATCG CTCTGTGTAT GGTAAGTCAC ATCCTGTCGT CATCGCCTGT
CATCCTAAAA TCTGACATTT CTATTAGCAT CGTCCGGAGC TCGAAAACGT CTGGGGCGAT
CTTCAAGCCA ATATTGAACC TGTCAAACCC ATTACTATGG AAGCTCACCC CTCGCTCAAA
CTCACGCTCT TGCCTTTCCA GAAGGAGAGT CTTTACTGGA TGAAGAAGCA GGAAGAAGGC
CCTTGGAAAG GCGGCATGTT AGCAGATGAA ATGGGTATGG GCAAGACGTG CGTAGCCATC
GAACATTCAT CTTGAGTCTG GCTGACCCTG TCATTTAGTA TTCAAACCAT TGCCCTTCTC
CTGTCTGAAC CTCGACGCAA ACCAAGTCTC GTCGTCGCCC CTGTCGTTGC ATTGATGCAA
TGGAAAAACG AAATCGAGAC GCATGCTGAA GGGTTTACAG TATGTTTGTG GCATGGACAG
GGGAGGATGA AAGCGGCGGA ATTGAAAAAG TTTGATGTAG TGAGTTGGTT CTGATGCTTG
CGACGCGTTT CCCTTATCGA TTACTGACAC GCTTTATCAG GTTCTCGTTT CGTATGGGAC
ATTGGAAGCT TCTTTCAGAC GACAGCAGCG CGGTTTTAAG CGAGGAGACA AATTCATCAA
GGAGAAGTCA CCTATGCACG AGTTTGAGTG GCACCGGTAG GCCGATTTTC TTCCCGACTT
TCTGAGGCTA CATTACTGAT CTCAGATTCA GAGTTGTGCT CGATGAAGCC CACAACATCA
AGGAACGATC CACCAACGCC GCCAAAGCAG CGTTCGCGCT CAAGGCGACT TACAAATGGT
GTTTGTCCGG TACTCCTTTG CAAAATAGGG TTGGAGAGCT TTACTCGCTG GTTCGATTTT
TGGGCGCCGA TCCTTTTAGG TATACCCTCT CCCTCAAATT GATCGTACCT CATGATAATG
CTGATACGTG TTTGCAACAG TCACTACTTT TGTAAGAAAT GTCCTTGTAA GAGATTACAT
TGGCAATTCT CCGATAAACG TCACTGTGAC GAATGCGGAC ACAAACCGAT GGACCATGTC
TGTTTCTGGA ACACGGAGAT CCTCACCCCC ATCGCCAAAT ACGGTGTCGA GGAAGGTGGA
CCGGGTCACA CTGCGTTCAA GAAACTCAAG GTTCTTCTTG ACAGGATGAT GCTCCGACGG
ACCAAGCTCG AGAGAGCGGA TGATCTTGGT TTGCCCCCGA GGACGATTGT GGTTAGACGG
GACTATTTCA GTCCACAGGA GAAGGAGTTG TATATGAGCC TGTTCACTAA TGCCAAGAGG
CAGTTCGCCA CCTATGTGGG ACAGGGAACG GTGTTGAACA GTGAGTGGAA TTTAGATTGA
GCGGGTCGTT CTGTCGAGTG CACAATGGCT GATCAGTTGT ATTTAAGACT ATTCGAATAT
TTTCTCGTTG ATCACAAGGA GTAAGTTACG ACCCTTTCAA GAGAATACGA TGGAGCCTGA
TAATTGTGTC AGTGCGACAG ATGGCTTGCC ATCCGGATCT TGTCTTGCGC TCAAAGAACA
GCACCCTCAC TGACGTCCAG GAAGGCACCG TGTGCCGATT ATGCAATGAT ACCGTGCGTC
CTCTCCTTCC CTTATTTTCA TCCACATCAT GGGGAATGAA ACCTAATATT ACATCCGTCT
GCAGGCCGAA GACGCTATCA TGTCACAGTG CAAGCATGTC TTTGATCGAG AATGTATCAA
ACAATACCTC GAGGTGAAAC AGATGCGTGG CCATAAGCCT GAATGTCCTG TCTGCCATAT
CGAGATTTCC ATTGACCTCG AGGCAGAGGC TTTGGATTTG GAAGAAAATA ACAAGAAAGC
TAGACAAGGT ATTTTGAGCA GGCTCAATCT TGATGTGAGT TCCATCGAGA AATCCTACGT
GCATGGCGGG ATCGTTGCTC ACTGTATTGT AGAACTGGCG ATCGTCTTCA AAGCTTGAAG
CGCTGGTAGA AGAATTGGAG AAGTTGAGAC ACAAGGATTG CACAATCAAA TCGCTCGTGT
TCTCGCAGTT TGTGTCTTTC TTGGACTTGA TCGCTTTTAG ACTGCAGCGC GCTGGATTCA
ACGTGAGTCT CGCCTTCCAC TTGATTTATC ATGAGAACCA GTAAATTAAT GTACGCTCCG
GCCAGATTTG CCGCCTTGAA GGTAGCATGA CGCCTCAGCA ACGAGATGCC ACTATCCAGC
ATTTCAGTAA GTTTTTCTGT TATACTTGCG CTTTGCCGTG GTTTGACCGT GATTTGTTTA
GTGAAAAATA CCGGTGTCAC TGTTTTCCTT ATCTCATTAA AAGCGGGTGG TGTCGCCTTG
AATTTGACAG AAGCGTCTAT GGTCTTCATG ATGGACAGTT GGGTAAGTCG CTTGTTTTGA
CATTTTCTAT TCAGAGACCG TAGGACCTGA CAGAGATGTT CCTTTTTTTC CGCAGTGGAA
TCCCTCTGTT GAATATCAAG CTATGGACCG TATTCACCGT CTCGGTCAAA AACGACCCGT
CAAGGTAGTC AAGCTCGTGA TTGAAGATAG TATCGAGGAC CAGATTGTTC AGCTGCAAGC
TAAGAAACTG GCCATGACCG AGGCGGCGCT GAGCTCTGAT TCGGATTCTG CACTGGGCAA
GCTTACTGTA GAAGATGTGA GTTTGGGTTC CTTAAATGAT GGTGTATGGC AGAGGCTAAT
ATTATATTCC ATAGCTTGGG TTCTTGTTCA AGTTGTAGAG AGGTTATTTG TGTTTTACAT
GTCTCTATAG ATATCTTTTA GATTCCTTGT TTCGTTGTAG ACATGTTG
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| Protein sequence | MPALRSTRKS AQNQPEMAVI DSVGHSRTNN AVSIKAQRQS TVEVSIPTRR TRSSTSNTAS
LVPNGVDRDE TEDEDWADGD VNMENGDSDI ELIEDQKPQI NGVNGKGKGR AKEQAQPFNI
GKYSRVAKAS VTDLKEDTRT SGRSSRAPRR SKSQASVKIE ELDGDSTESE FVVDGGGYAM
DSEDEARQLK QAIRASSSKA ASSKGKRTNH VALNAALARI AGKRSGQSST ATDTANATPL
SDDDPVPSDS EFEEAEEQGS DLSDLSTSDS EVEVPLSRGK GSMRGGRGGA QGSKAARPSV
AKGKTAAKGK TKKFQGKGRK LGGSDSEKEE EFDGAEALSD EDESLSELSD PNMSWLEKRQ
MQKRKEKRHA AREAAPRKKK ERELAKKLGR KLTNGEKNLI ALCMHRPELE NVWGDLQANI
EPVKPITMEA HPSLKLTLLP FQKESLYWMK KQEEGPWKGG MLADEMGMGK TIQTIALLLS
EPRRKPSLVV APVVALMQWK NEIETHAEGF TVCLWHGQGR MKAAELKKFD VVLVSYGTLE
ASFRRQQRGF KRGDKFIKEK SPMHEFEWHR VVLDEAHNIK ERSTNAAKAA FALKATYKWC
LSGTPLQNRV GELYSLVRFL GADPFSHYFC KKCPCKRLHW QFSDKRHCDE CGHKPMDHVC
FWNTEILTPI AKYGVEEGGP GHTAFKKLKV LLDRMMLRRT KLERADDLGL PPRTIVVRRD
YFSPQEKELY MSLFTNAKRQ FATYVGQGTV LNNYSNIFSL ITRMRQMACH PDLVLRSKNS
TLTDVQEGTV CRLCNDTAED AIMSQCKHVF DRECIKQYLE VKQMRGHKPE CPVCHIEISI
DLEAEALDLE ENNKKARQGI LSRLNLDNWR SSSKLEALVE ELEKLRHKDC TIKSLVFSQF
VSFLDLIAFR LQRAGFNICR LEGSMTPQQR DATIQHFMKN TGVTVFLISL KAGGVALNLT
EASMVFMMDS WWNPSVEYQA MDRIHRLGQK RPVKVVKLVI EDSIEDQIVQ LQAKKLAMTE
AALSSDSDSA LGKLTVEDLG FLFKL
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