Gene CNE00500 details

Gene Information

• Locus tag: CNE00500
• ID: 3258013
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006687
• Strand: -
• Start bp: 130042
• End bp: 132360
• Gene Length: 2319 bp
• Protein Length: 568 aa
• GC content: 49%
• IMG OID: 638256635
• Product: cop9 signalosome complex subunit 1, putative
• Protein accession: XP_570755
• Protein GI: 58267198

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.278053
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCTATGCGCC TTTCCGCGAC TGCCCTCTAG TTCATAATCT CACCTCGTTC TTCTCCAGAA 
GTCCAGGACT TAGGGACAAT GGCTTCCAAA CGATCATACA CCGACATCTT GGCATCTATT 
GATCCCGCCC AATTTGACTG GCCCGCTTAC GAAGGCACAT ACAAAGGTCC GTCATTTCCT 
TCACCGTTCC TTGGCCTTAC CAACTTTACC TTGCAGGCCG AGCCCTTATA ACCCGGTATG 
CTCATCTTGT AAACACCTGT GTTGCCTACC CTTCCCTATC GGCCTCTGAG CTTGCAAAAA 
CGGCATTGCT CAAGCTAATC CCACTCGTCA AGTCATCCAC ATGGGATATC AACACTTACC 
TCTGGGCTGT ATCTGTCCTT TTTACTATCG TTCACCCTGG TCAGAGATGG AAGGCTGCCG 
AGGAAATGGA AGTGGACAGA GAAGAGGATG ACGAAGGTGG AATCACTAAA ATCACGTCGA 
GAGGTATCCC TCCTGGAGAA GGGAAGGAGG AAGATGGGTT CCCTGATGAG AGATGGATAA 
ATGAGACGAG GGACACTGTA GCGAAAGAGG TTTCGAGACT TGATGTAGAG CTGAGAGGGT 
ATATGAGCAA CCTTATTAAG GAAAGCATCC GTGTAAGTTG TCACTTGTCG GTATGATCAC 
TGGACGAGCT GATGTGAAAG CTGCGATGCA GTTGACGCAA CTTGCATTTG CAGAATTAGC 
TTTCAAGGTC GGCAAAGTGC GTGAAGCTCT CAACTACTAT GCCGCCACGC GAGAGTATAG 
CTCTACCCCT CAGCACCACG TCGATCTTGG TGTGGGCGTC GTAGAGGTAC GTTCACAATC 
CTCATTCGTC TGAATGTAAT GCTAACCATC CTCTATAGAC TTGTCTTGCG TTCAACTACC 
CGGCACCCCT TTCAGGCCAC ATCGCCAAAC TCGAAACCAC GCTTGACCGT CTCCATCCAC 
CTCCTCACAC TCAGTCCAAA CAGCAAGCTG GCCTCAGCAC GACCGCTTCG GACTTGCGGG 
AACGTCAAGC CGAAGAAAGC CGCTCTCAGG CGGCGAGGAG GAGTGTGATG GTGAGAGCCA 
AGGTAGGAAA AGGGCTCATC AGCGCGAGTC AAAAAGATTG GGCTAGGGCT GGGAGAGAGT 
TGGGATGGAT TGAGGAGGAT GAAGGCGGGT TAGGCGATTG GGAAGGCAAG GTGCGTCTTC 
TTGTCTTATG GCCCTATCAA AAGTGAAAGC TCCGAGACAA TAGACTTTCG CTAATGTCAA 
ACCAGGCCAT TTCCACGAGC GATCTGGCCC TCCTTAGTGC TTTCTATGTC CTTGCATCAT 
CTGATCGCAG TCGTATACGT CGAGTACTTC TTGATCGAGC GACGTTCAAA AATCAGCTCG 
ATGATTCACA AGGATGGATT GTCGACTTGG TCAGAGCGTA TGTTGACGCG AATTACGAAC 
AAGTTATGTC TCTCCTTCAG TACTCCGAGG TATGTCCATT TTTTCCCTCA CCTTTTTTTT 
TTCTTTGGTT GGAAATCTCC GATTCTCATG TCCTCGCTGT TTCAGCCAAT TCTTCTCCTT 
AATCCCTTCC TCTCGTCCTG CACCCGCTCC ATCATCTCAT GTATTCAGAC CCGTTCCATC 
ATCCAATATG TCCAACCATT CTCGACTATC CGCATTCAGA CTATGACCCA AGCATTTGGG 
ATGGAAGGAG ACAAGATGTT GGATGTCATT GAGAAGCTGA TTGGGGATGG GGATGTTGGA 
GCGAAGATTG ATTTGATTGA TAACGTGAGT CCCATTCTTC TCCGTGCGAG CGACAAATCG 
CGGTTATTAA TGATTTTTTC TTTGGCAGGT GTTGGTGATG GATACACCCG ATCCGAGGGC 
AGAGATGTTT GAAAAGGCGT TGAAAGCGGG ACAAAGGAGC TCCGAGCTTG CTAAAGCATC 
ACTTTTGCGC ATGAAGCTGT ACGTTTCTTT CTTCTAATCT CCTTAATCCG TACGTCATTA 
ATGGGCTTTA TGTTCCTTTT TATTCCAGTA CGGAAGCTGG GATCACCGTT AATCCTCATG 
CTGAGAGTAT CAGTACCGAG ATATCCGGCA AACAGCAACA GCAGCAGCAG CCACCACTAG 
GCCCTGATGC CACAGCCACA AGCACAACCA CAGCCGTGCA AGTACCGGGA ACTGCTATGG 
CAGAAGATCA ATCAGCGGGA GATGTTGTGA TGCAGGCTAC TGGGGAGCCG AATGGCGAGC 
ACGTGGCTTA GAGGACCACT GTTTGGGTCG TAGTTGTCGT TCTCCCAGGC ATCCGTATAA 
GGAAGTCGAG AAATACTCCA AGAGATGCTA GTTGTATTA 

 

Protein sequence

MASKRSYTDI LASIDPAQFD WPAYEGTYKG RALITRYAHL VNTCVAYPSL SASELAKTAL 
LKLIPLVKSS TWDINTYLWA VSVLFTIVHP GQRWKAAEEM EVDREEDDEG GITKITSRGI 
PPGEGKEEDG FPDERWINET RDTVAKEVSR LDVELRGYMS NLIKESIRLT QLAFAELAFK 
VGKVREALNY YAATREYSST PQHHVDLGVG VVETCLAFNY PAPLSGHIAK LETTLDRLHP 
PPHTQSKQQA GLSTTASDLR ERQAEESRSQ AARRSVMVRA KVGKGLISAS QKDWARAGRE 
LGWIEEDEGG LGDWEGKAIS TSDLALLSAF YVLASSDRSR IRRVLLDRAT FKNQLDDSQG 
WIVDLVRAYV DANYEQVMSL LQYSEPILLL NPFLSSCTRS IISCIQTRSI IQYVQPFSTI 
RIQTMTQAFG MEGDKMLDVI EKLIGDGDVG AKIDLIDNVL VMDTPDPRAE MFEKALKAGQ 
RSSELAKASL LRMKLTEAGI TVNPHAESIS TEISGKQQQQ QQPPLGPDAT ATSTTTAVQV 
PGTAMAEDQS AGDVVMQATG EPNGEHVA