Gene CNE00310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNE00310 
Symbol 
ID3257601 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006687 
Strand
Start bp72244 
End bp73600 
Gene Length1357 bp 
Protein Length352 aa 
Translation table 
GC content52% 
IMG OID638256613 
ProducttRNA 2'-phosphotransferase, putative 
Protein accessionXP_570729 
Protein GI58267146 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1859] RNA:NAD 2'-phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0508161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGCC CGCCCGAAGA CCCAGATGTG AGAAACAGCA AGACATTGGC GTACATCCTC 
CGCCACGGCG CTGAGAAGGA GGGTCTCTAT ATCCGTTCCG ATGGGTTTAT CAAGCTTGCC
GATGTCGTGC GTCTCTCTTT TCCTCTTTCA CTCTATCCGT CAATTAGGGT GCTGAAGTTG
TGTTTCTTTG ATCTTTATGT TCTTTTTTAT ATCATTATCT GTCCCCTAAA CTACTCGTAG
CTGGCAAGAC CAAAACTTAA AGGCGTGGAC GAACCCACCA TCCTCCACCT CGTGCAGACA
AACGCTAAAA AGCGATTCGA GCTATTTTGG GGGTATGATC CCTCGCCTCC TAGACCGAAG
AAGAAGCCTA CGCAGGGGAA GACGAAAAAG CAATTGCAGA GGGATCGTGA GACGGCGGCG
GCCGCTGCTG CTTCTGCTGC TGTTGCTGCT TCTGGGACAG GGGAAGGGCA AGAGAAGGGC
AAGGAGCCCG ATGCAGCGAC GATAGACATT ATCGCGTCTT CCCTTGCGTC CACGGACCTT
ACCGCACCAC CGTCTTCTTT GTCTATAAAC TCCACCGCGC CAGCCCCAGC CCAGAGTTCG
ACTTCAGTGG ACCCTCCAGA ACTCCCTCTC ATTTCCCTTC CCGACCCACA CACCTCTGCC
TCCGATTCTG ACGCCAACGC CAGCGCCAAT AGTGACAACC CGAAGGGCGA ATACTTTATT
CGCGCAACGC AAGGCCACTC TATCCAGCTC GAGTCGACTG CACATCTCGA ACAAGTGAAA
GATGATGAAG AAGGGAAAAG AAAGGTAGGC TTGATGGTCC ATGGCACGAG ATGGGAGTTG
TGGGATACGT TGAGTAGGTT TCTTCTCCGT CTTTTATATA TATATCGACC GAGATGCTAA
TGGATACCAA CCAAACAGAA GAACAAGGTC TCCAAAAGAT GACCCGCCAG CATATCCACC
TCGCCCCTGG CTTCTCGGGC CCCATCACCC CTCGGCCCAA CTCCACACTG TACATTTACC
TCGACCTGTC CAAGCTTGTC GCCGCTGGGA TCCCGGTGTA TGTCAGTGCG AATGGGGTGG
TGCTTACCCC TGGTTCCAAG GGCGGGGAGA ATGGAGAGGG GGCAGGAGTG GGGAAAGAGT
TTTGGAGAAG AGCGGTAAGG AGGAAAGAGG GGAAGAGGTG GGTTGTGTGG GAGGATGGGA
GGGAGGTGGA GAGGGAAGAG TTATCAGGTG AGGAGTAGGA AGTAAGGAGG GAAAAGTAAC
GGAAGAATGA GATGAGTACA ACGAGTACGC CGTTTTGTCC TGCATAAGAA CCGCACTGTG
ACAAGAGATT TTACTTTTAA TGACAAAACT ATAAATT
 
Protein sequence
MPRPPEDPDV RNSKTLAYIL RHGAEKEGLY IRSDGFIKLA DVLARPKLKG VDEPTILHLV 
QTNAKKRFEL FWGYDPSPPR PKKKPTQGKT KKQLQRDRET AAAAAASAAV AASGTGEGQE
KGKEPDAATI DIIASSLAST DLTAPPSSLS INSTAPAPAQ SSTSVDPPEL PLISLPDPHT
SASDSDANAS ANSDNPKGEY FIRATQGHSI QLESTAHLEQ VKDDEEGKRK VGLMVHGTRW
ELWDTLKEQG LQKMTRQHIH LAPGFSGPIT PRPNSTLYIY LDLSKLVAAG IPVYVSANGV
VLTPGSKGGE NGEGAGVGKE FWRRAVRRKE GKRWVVWEDG REVEREELSG EE