Gene CNE00260 details

Gene Information

• Locus tag: CNE00260
• ID: 3257676
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006687
• Strand: -
• Start bp: 59485
• End bp: 61710
• Gene Length: 2226 bp
• Protein Length: 540 aa
• GC content: 48%
• IMG OID: 638256608
• Product: hypothetical protein
• Protein accession: XP_570723
• Protein GI: 58267134
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2271] Sugar phosphate permease

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.00951238
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCCCT TTTTACAGTC AATCAGTAAC AAGCCATACA ATACCTGGTT GTGGATTCAC 
TCCGTAAGCA AAAGGTAATC GAAACACATA TTACAACAAC TCCAACTCGT TGTCGAGGAG 
TCTAACAGGC CAGCTTTTCA CGGGAAGCAG ATTCAACAGA CCCAAGTACA AAGTGGAATA 
ATCATGACTT CACAGCCGAG TTTCCATCCG GAACCAACAA TTATTGAAGA GAAGCAAGGC 
GCTCAACTCG ATCTCAACGA GACCGACAAG CAGTCATTTG AAGGAGGCGG ATACACTGCA 
GGTACTGACG TCGAAGCCAG GAGCTCGAAG TATGCGGATA GTGATGCCGG GTTGGTACAC 
AAAAAGGAGC TGAAGAAAGC TGAAAGAAGG CTGCTTTGGA AACTTGGTTT GTCCTTACCT 
TGTTGACCGG TTGGTTGTCA TCTGACGTCT GTTTCGTAGA CGCTGCCATC TTACCGTTTG 
CTACTTTGAT CTATCTCGGA GCGTATCTTG ATAGAGGAAA CATGTGAGAG CTACAGATAT 
CCATACATTC AATCCGCTCA TACTATAAGC AGCGCCAATG CGAGGCTTCA AGGTCTGCAA 
GAGGAAGTCC TAGAGGGTAG TGACACGAAC TACTCCATCG CCCTTGCCTG TTTCTTTGTT 
ACTGTAAGTG GGCCCTTTTC CTCCTGAGCT CAATTAACAG CTCTTCTCAG TATATCGTTT 
TCTCAGTATG TTCCTATCTT ACCGCGTAGG GGCAAGCCTT GACAATGGTA GATACCCGGC 
ACTCTCCTCG CCAAATACTA TCTCCCCTCC CGTTCTATCG CATGTGGCGC GCTCATTTGG 
TCCATCGCGG CAACGTGCCA AGCTGCTGCC TTCAACAAAG CTGGTCTCTA CGTATGCCGT 
CTTTTCGTCG GAATCGGTGA AGCTATGTCT GGCCAGGCGA CCGTTTTGTA CCTCTCGTTC 
TGGTATACTA AGCGCGATCT CGCTAAGCGT GTTGGGTTAT TCGTGGCAGC AGGGACAGTA 
TCCGGTGCTT TTGGAGGGTT GATCTCTTTT GGTGTATCGA ATATCACCAA CAGCCCGATA 
CCGCAATGGA GAATCCTCTT TCTGATTGAA GGTTGCCCTG CTGTTATTTT GGCTGTCTGT 
GTATTTTTTT TCATGCCTAC CCGGCCGGAA ACGAGCAAGT ACCTCACAGA AGAGCAACGA 
ACCATCTGTC TGACGCGACT GAATGGGGAG AATAATGTCG AGGAAGTGGG TATCGATTGG 
AGGGCAGTTA AGAGGGCTGT GACGGATTGG AAGGTGTATG TTATGGCTGT CGAGTGAGTG 
ATTCTGCGCT GCATTATCGA AACAGTTCAA CCGATCTGAC GTTAGTTAGG TACGCTTGCA 
TCAACCTAAC CCTCGGTTCT GTGAGCGGAT TCCTACCCAC TATCATTAAG GGTTTCGGTA 
CGTCATGTTC ATTGTTCAGC TTAGTACCTA GCATTTATAG CTCACCATCT ATTTAGGATA 
CTCCAATGCC CGAGCCCAGC TGTTCACCGT CCCTCCTTAC GCAGTCGCCT TAGTCTTCAT 
GCTCTTACTG ACCACTTACT CTGATCGTCG TCAAACCCGA GGGATCCCCA TCGCTGTAGT 
CTTCATCCTC GGCCTTGTCG GCTGGGCCGT CCTTCTCTCT GTACCCGCTA CGACCCACTA 
CTCCGCGAGA TACTTTGCTT GTATCTTGAT CGTTACAGCG GGATATGCCA ATCTCCCCCT 
GCTTGTCAGC TGGCTCAGTG GAGCGACAGC GAATCAGAGT CAACGAGCGA CTGGTTTGGG 
AGTGATTAAT ACTATCGGCC AATGTCTTTC TTTGACTTCA GCTTTCCTGT ACGTTGCTCC 
AAGTTGTTCT CTCTTTTTAT GAAGACAACG CGCTGACTTC TTTTTTCATA TCCAATTAAT 
TCTAGATTCC CCACGGCCGA AGGACCACAG TACACAAAAG GAGCATCAAT CAATATCGCA 
TTCAATGCAC TTGGTCTGGT CATCGCGTTG ATCATGACAA CATACTTCCG ATGGGAGAAC 
CGAAGGCGTG ATAAGAGGGA AGGCGGAAGG CCGCCGAGGG GCACTTATCT CGATGTGGGG 
GATAAATACG ATTTGGCACC TGGTAAGTTA TTTTCTACCT TTTGGTATTG GAAAAGAGAC 
TGACTGACGA GGGACAGGGT TCCGGTATGT TGTGTGAGCT TGTTTGGGGA TTATTGAGTA 
TTGAGA 

 

Protein sequence

MDPFLQSISN KPYNTWLWIH SPSFHPEPTI IEEKQGAQLD LNETDKQSFE GGGYTAGTDV 
EARSSKYADS DAGLVHKKEL KKAERRLLWK LDAAILPFAT LIYLGAYLDR GNIANARLQG 
LQEEVLEGSD TNYSIALACF FVTYIVFSIP GTLLAKYYLP SRSIACGALI WSIAATCQAA 
AFNKAGLYVC RLFVGIGEAM SGQATVLYLS FWYTKRDLAK RVGLFVAAGT VSGAFGGLIS 
FGVSNITNSP IPQWRILFLI EGCPAVILAV CVFFFMPTRP ETSKYLTEEQ RTICLTRLNG 
ENNVEEVGID WRAVKRAVTD WKVYVMAVEY ACINLTLGSV SGFLPTIIKG FGYSNARAQL 
FTVPPYAVAL VFMLLLTTYS DRRQTRGIPI AVVFILGLVG WAVLLSVPAT THYSARYFAC 
ILIVTAGYAN LPLLVSWLSG ATANQSQRAT GLGVINTIGQ CLSLTSAFLF PTAEGPQYTK 
GASINIAFNA LGLVIALIMT TYFRWENRRR DKREGGRPPR GTYLDVGDKY DLAPGFRYVV