Gene CNE00130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNE00130 
Symbol 
ID3257955 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006687 
Strand+ 
Start bp25005 
End bp26115 
Gene Length1111 bp 
Protein Length302 aa 
Translation table 
GC content52% 
IMG OID638256595 
Productconserved hypothetical protein 
Protein accessionXP_571079 
Protein GI58267846 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCAG AATCTTTCAA TGCTGCTCAA AAATTCGAAA ACGGAGAGGA AGTCGTCGAT 
CTGGCTGTGG CCGGTCAACC TCAACCGGAG GACGGTGAGC ATGGAACGAG TCTCTTGGAC 
GTCGAGTCTG TAAGCTGATT GAAATCCAGC CACCCCTTTG GTCTCTTTGA AGACCCCCCA 
GTTGTTCTCC TTAGCCAAAC AAGGAGTTAT CGTTACTGGT GCTGCCCGAG GTCTCGGTTT 
GGCCATGGCC ATCTCCCTCC TTGAGGCTTC CGCCGCTCAC GTATATTGTG TCGACGTTCT 
CCCCTCTCCA GTCACGGACG AGTGGGATCT CGCACAGCGC ACCGCAAAGG GATTCGGAAG 
CACAATCGAG TACCGTCGTC TCGACATCAC CGACGAAGAG GCCGTTAAAT CTTCATTCGC 
AGACATCTAC TCGACATGTT CTTATCCGGT CAAAGGACTC TTTGCAGCAG CGGGAATCCA 
ACAAATGATT CCAGCTTTCG ATTATCCGGC CAAGGACTTC AGACGAATCA TGGAAGTAAA 
TGTTACCGGT ACATCCATTT TTATGCATCG GGATGAAGCT GACCAAGTGC AGGAACCTTC 
TTGACGGTGC AGGCAGCCGC TAAGGAAATG AAAGCACGTA AAATTGCGGG CAGCATCGTC 
ATTACAGCCT CTATGTCTGG GTCTATTGCT AACAAGGGTA AGTTAAGGGC CCTTTGAGGG 
GAACAAAGGC TGAAACGACC CAGGTTTGAC TTGTTCGGCT TACAACACCT CAAAATCGGC 
TCTCTTGCAA CTCTGTCGCA GCGTCGCAGC CGAGTGGGGT CAACATGGAA TCCGAGTTAA 
CGTACGTCTT ATTCTGTGTC CTCTGCGTCT CGGGTTCCCA AGCTCACGGT CGCTATAGAC 
TCTCTCTCCA GGATATATCA GGACAGCCAT GACGGACGGA CTTCTCTCTG AGCTACCCGA 
CCTTGAGCAG GAGTGGCTAC GAGGAAGTAT GCTCGATCGT CTATCCACTC CTGACGAATA 
TCGAGGACCA CTTTTGTTCT TGCTCAGTAA CGCTTCCAGT TTCGTCACCG GGGCGGATCT 
TCTCGTGGAT GGTGGTCACA CCGCATTCTA G
 
Protein sequence
MTAESFNAAQ KFENGEEVVD LAVAGQPQPE DATPLVSLKT PQLFSLAKQG VIVTGAARGL 
GLAMAISLLE ASAAHVYCVD VLPSPVTDEW DLAQRTAKGF GSTIEYRRLD ITDEEAVKSS 
FADIYSTCSY PVKGLFAAAG IQQMIPAFDY PAKDFRRIME VNVTGTFLTV QAAAKEMKAR 
KIAGSIVITA SMSGSIANKG LTCSAYNTSK SALLQLCRSV AAEWGQHGIR VNTLSPGYIR 
TAMTDGLLSE LPDLEQEWLR GSMLDRLSTP DEYRGPLLFL LSNASSFVTG ADLLVDGGHT 
AF