Gene CNE00080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNE00080 
Symbol 
ID3257573 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006687 
Strand
Start bp11882 
End bp14659 
Gene Length2778 bp 
Protein Length849 aa 
Translation table 
GC content52% 
IMG OID638256589 
Producthypothetical protein 
Protein accessionXP_570694 
Protein GI58267076 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAAAAAACTA CCAAAAAAAG GCCACCACAG CTGCCCATCT CAGTCAGGCC GGCAACTACC 
TTCACATCCT GCCATGCGCG TACCCCATAC CCTCCGAAAA CTGAATAATG TCAGGTTAAA
AAACCATATT TACACGTACG TCCCTTCAAA GTTCCAATGT CTAATCGAAT GCCGCTGACT
CGTCATACAG AGGCTCTTTT TCCAACCTGC ACCTATCTGC AAGGAGGAGC AACAGGAACA
AAAAGAGTGA CAGCTACCAC CCCTTTCCAC TCCCATCAGC TATCAACGCC ATCCCTCCTT
CTCCCATTTC CCAACTCCCG TTCCCTACCA GCCCTTTACG CGGCTCATGG TCCCAAACGC
CTACCTCCTC CATTCCTGCT GCCTCCCTTG GTCAACTTCA AAAACTCCTT CAACCTTATT
CTGGTGAAAA GCCTGAATCA ATCAGCGCCA GTACCACTGG CGAGATGTTG AGCATCCAAC
ATGCTGAAGC TGTCTGGCTC CTCTACTCAA GCTTTCCACA AGCATACCGC CGGACCTTTC
CTCTCTCTGT CCTCCATCAA ACATTCCGCC AAGTCGTCCC TCGATACTCG GATATCAAAA
TCCTTATTGG CAATCCACGC ACCCGTAACC CGAGTGTCGT GAGAGAACAT CGAAGAAAAG
TTAGAAAGCT GGCTGCGGAG TGGGAGATGA GGTTGAGGGT TGTTGCTGGG GATATCCTTG
CCCCCAGGCG AAATAGTGCG AGGCAAGAAG GAGAAAAGAA GAAAGAAGTG TTGCATACCC
CTGGAGTGCT CACGGGTGGT CTTCGAAAAC TTTCAATATT AGGCGACAAA ACGGGATGCG
AATCGATTCT TCTCGAGCTC AAATCCCGTT TTCCCCCTTC CCTTTCCTCT TCTTCTAGCG
ATGCCGCTTC CTCATCACTC CCGACGGTTT CTCCCTCCGA ATGGCGGACC CTTTACGACT
ACTCCCTCCG CTCCGTCGTC CGCTGGCTCT CGCTCAACAT TTACCGTGCT CCCACAGCCC
AAGGCGAGAT TCTTTCTGCT ATCTCTTCCC TTAAACGTCT CATCAGCGGT ATGCAATCCC
AAGGTGTCCC AGCCGGCGAG CAAACGGCTT TGGTCCTCCT CGACGCTGGA CGATACACTT
CTTCGCCTGC TGCTGTCCAG GATCAAAAAG TGAGAGAAGG GTTTGAAGAT CTTACGAGGG
TGATTTTGGG AGGAGGCTAC GGGATTAAGA GGAGGGATGT GGGTGGATTG GGGCTGGGCT
GGGAGGGATT GAAAGTGGAG TTACCGACGC AAGTTAAATT GGCGGTGATT GAGATGATGG
GCCGGGAAGG AAATCTGTGG GGGATGATTA CAGCTTTTGA GAAGATGTAT CCCGATCTTT
CGGTTCCCTC TCCCGCCCCC GCGTCAGCCA CCACCCCCAC TTCCACTATG ATGGCTACCT
CTGCCTCTGT GGTCGGAGAG TTCCAAGAAA ACATGATGGA GGCTGAAGCG ACGACGGCAA
AGTTGACCCC GGAAGAAGTA ATAGAAGAGG AGATCCCGAC GTTGAGCAGT ATGATGGCCA
AAGAACGGGC TGCAAGAGCT GAGAGGGATT GGTTAGGTCG GGTGCGTCAT TCCGACACAG
ATGCTTCAGA CATCTCTGCC TCGACATCTG CAAACACGGC GATATTAGCA GAATCAGCAG
AATCAGCAGA ATCAACAGAA CCAGCAGAAA TGGTGGAGCA CGAACCATCT TATCGTCGTT
CCTTTTCAAC ATACTTACCA TCTATCCCCA TGCCTCTCTC TCTTCTTCCC TCCTCCTCCT
CATCCTCCTC GGAACCCGCG CGCGCGTGCG TCAACTTGGC CGACTTTGAC GATGCCAACT
CAATCCCACC CGACTACATG ATCAAAACCA TGCTTCATTA CATCTACCTC CATCGTCACC
CTGACCCTGA GGCTGTTTTC CACGGCGGAC GAGGACGACC AAATGTGAGA GAGATGGGGT
TGTACGTGTG CAGAGCAGGA TTGAGGTTTG CAGCGTTGGA GCAAGTCCGA TGGTTAAGCC
AAATCGTCAC CACTTTCTTT TCTTCTACTC TCGATTCCAC TTTTTCTCGC CCTACCCTCA
AAATCACTCA ACCGAGAATC CACCCCAACC CGCTTTGGTT CAACACCGCC CTCCGAATTG
TCCTCTCTTC AGCTGGCCGT AACAAGAAAG CTATCGGTAA AACAGTGGTG TTGAAGGAGG
AGATTGAAAC ACTTGAGAGA CGGTTAGAAG AGGAGATTAG GGTTTTGGAA ATGTTGAGGA
CGAGCGGAGC CAACGCCGCG AACGTTGTGA ACGCGAGCGC CACTGGGGAT GAGAGCTCTG
TGGACACGTC AGAAGGGCAG CTAAACGACA TAACCACTTC TACACCCTCC CTCACCCCAA
ACAGCAACAT TAACATTGAC ATCCGAACCC ATCTCGAATC CCTGCAAACC AAACTCGACC
AACTAGCGAG CCTGAAAGAA GAAATCCAGC ATAGGCAGGA GGTGGTCCTC GCGGGAAAGC
GCAGAGCGAA AGATAGGGCT GCTGAAGCTC AAGCTATTGA GGCTGCCGAA ACTCGTGCGT
TAATCGAAGC GCGGGCCGAT GAGGCTGTGG CGGCGGCGGG GAGTAAGAGT GAGACGAAGA
TGAAGGAGAA GGAACAAGGA AGGGAAGTGG ATGTGAGTGG GGTAGCGCTT GGGTAGAACA
GAGACGATGA GCTGAAGTGA AGTAGTGTTA GAAAAAGGGG AAAATCAGTG CTTCCATCTT
GCATAAGGGT GTATAGAG
 
Protein sequence
MRVPHTLRKL NNVRLKNHIY TGSFSNLHLS ARRSNRNKKS DSYHPFPLPS AINAIPPSPI 
SQLPFPTSPL RGSWSQTPTS SIPAASLGQL QKLLQPYSGE KPESISASTT GEMLSIQHAE
AVWLLYSSFP QAYRRTFPLS VLHQTFRQVV PRYSDIKILI GNPRTRNPSV VREHRRKVRK
LAAEWEMRLR VVAGDILAPR RNSARQEGEK KKEVLHTPGV LTGGLRKLSI LGDKTGCESI
LLELKSRFPP SLSSSSSDAA SSSLPTVSPS EWRTLYDYSL RSVVRWLSLN IYRAPTAQGE
ILSAISSLKR LISGMQSQGV PAGEQTALVL LDAGRYTSSP AAVQDQKVRE GFEDLTRVIL
GGGYGIKRRD VGGLGLGWEG LKVELPTQVK LAVIEMMGRE GNLWGMITAF EKMYPDLSVP
SPAPASATTP TSTMMATSAS VVGEFQENMM EAEATTAKLT PEEVIEEEIP TLSSMMAKER
AARAERDWLG RVRHSDTDAS DISASTSANT AILAESAESA ESTEPAEMVE HEPSYRRSFS
TYLPSIPMPL SLLPSSSSSS SEPARACVNL ADFDDANSIP PDYMIKTMLH YIYLHRHPDP
EAVFHGGRGR PNVREMGLYV CRAGLRFAAL EQVRWLSQIV TTFFSSTLDS TFSRPTLKIT
QPRIHPNPLW FNTALRIVLS SAGRNKKAIG KTVVLKEEIE TLERRLEEEI RVLEMLRTSG
ANAANVVNAS ATGDESSVDT SEGQLNDITT STPSLTPNSN INIDIRTHLE SLQTKLDQLA
SLKEEIQHRQ EVVLAGKRRA KDRAAEAQAI EAAETRALIE ARADEAVAAA GSKSETKMKE
KEQGREVDC