Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND06410 |
Symbol | |
ID | 3257446 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | - |
Start bp | 1777008 |
End bp | 1779513 |
Gene Length | 2506 bp |
Protein Length | 644 aa |
Translation table | |
GC content | 49% |
IMG OID | 638256580 |
Product | vacuole protein, putative |
Protein accession | XP_570068 |
Protein GI | 58265824 |
COG category | [R] General function prediction only |
COG ID | [COG5273] Uncharacterized protein containing DHHC-type Zn finger |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CACACATCCA AACCTGCCAA TCGCATAGTC GCGTCGCATC AAATGAATAG GCTCCATTCC TCCTCCAACA TGAACAGAAA TGGTTGGACG ACGGAGGGGA AAGAGCGGCA AAATTGGTCA ATTCTTTGAG CGGATACCTC TGTATTGTGA GTTCCACGTA TTCCCTTCAA GAGAGCTGCC ACTGACTCAG CCCCATCATC AGTTAGTTAT CTCATCTTGA CTTCAGTATG GCTTCTATTC ATGCTCTTTA TAACCCTCGG CGAGGTACTC ATCAAGCGGC GCCAGATCGG TCGATTCCTC GAGCAGTACG TCCTAATCTA TAATAGCGTT TACTTTTAGG AAAGTGTATA ATATCAAACT GACGCTGAGT AAAGGGTAAT CACTTTTAAC ACCCTGCTCT TCTTCACCGT CTTGTCGCTT ATCACCACAT CCCTTCGATC GCCTGGCAGT CCTGACCAAA CGTTCGCTCC AACCTCGTAC GTTCCAGGTT TTAGTTTGGT CCGGCAAAGG CAAGAACGAA AGCAACATCT TTCAAAGAAC AATCACTTGC CTGTTCGACC TCCCATAGGT AAGTCCAAGC TCAAAATAAA CATCAAGACC GAACCACCGC CCTCCCTCAA ATTCCTACGT AATCCCCAAT GGGTTTCCTC ACGTCTCCAC AAAGATCGCC CCTCACCTCT TCCCCTTTTT AAGAACCAAT CTTACCCATC TATACCGTCT ACTGCTGATT CTCCTCCTTC TGAGAATGAA AAAGGTAGCT GTGAAAGTAA TAATATGGGG TGGAGCGACT TGGGATCAGA GTCGGAATTG GAATCGGATT ACTCCCCTTT CCCGCTTAGC CTCAGCTCAC GAAACAGCGA TCGGGATAAG GATGTAGAAA GGAATGGAGA TGGCGGAGAA CGTGACCCAC TTTTGATCCT TGAAGAAGGG CGTGTCCCTG CGCATGCAGA CATGAGCGAA AAGGTTGACT CTCCAACATC AACATCAACC TCAACACCAG CGATAGATAC CAGTGGTAAG ATCCAGCCGC GGTGGTGTAA ACGGTGCGAC GCCTGGAAAC CCGATCGGAC ACATCACTGT AGGCACTGCC ATCGTTGCGT TCTCAAAAGT AAGTAATTTC TCCCCATACC CTTTTTTTTC CCATTATCAA GTTGCGGATA GCTGATGTTC GATATCTGTC ATAGTGGACC ACCATTGTCC CTGGGTAGGG ACATGTGTTG GGTATCGTAA CTGTACGTCC CATTTTTGCC CCTTCCCACA TCCCTTCCCT GTTTTTAGCG CCTCTCGCTG ATCTCTCCTT ACCCTCCCTC TCACTCAATG ACAACAGACA AACCCTTCCT CCTCTTCATC ACATACGGCA CCCTCCTCGC TATTTACACC ACTTTCGAAA CCGGATACGA AGTGTATCTC TATTTCTTTC ATCCTCTTGA TCATCCGCTA CCGTCACATC TGGGCGATCT TTCCTCCCCT TCTCCCCTCC CCGCGCCCGT CTCTCTGCAG CTCGGACCAG CAGTAAGCAT AATGCTCCTC ACCATGGGTA TATTCATCAC CTTCTCCGTC GGGGGACTGG CATGTTTCCA TTGGTGGTTA GCTTCGTACG TGTTTTCTCC CCTCCCGCCA CGAGACGATT AACCCTGACA ACGTTTTGCT CACTTTTATG CTGTCACTCT TCAGAAAAAA TATGACAACC CTCGAATCCA TCACCCATTC ATACCCCACT TCCCTCTTAT CTTCCCTTCC ATCCAACCAC AACACGTCAC TTTCCTCTCC CCCCGCAACT GCGCCGAATC TGTCATACAA ACAACGCCAA TCTCTCTCCC GAAGAGCACA AGAAATAAAC GTCTACGACC TCGGGTGGAG ACGTAATCTG AAACAAGTTT TCTTTGGTGG TCATAATAGA CATCGTGATC GCGGGCCCGA TCTTGGTGAT GGAGGTCGGT GTGAAGATGA GGATAAGAGG GTGACGATAG GGATGGTATT AGGAGCGATG TGGCCGACTA AAATCGGGTA CGATCAGTAT GTCTATTTTC CCCCTTTTTC CTTCCCCTTT CCCCTTTCTC CTCTACCTCT CCTCGCTACA TCTCCTGAAG CCTGAACTAA CCTAACCCAT CTAGATCCGA TCCCATAGCT GGCTCTGGCT ACGACTTCCC ATACGACCCT TGCGCCCTTG AACGACTGAA AACGTTGACT GAAAAGCTGC GTTCGAGTAC GCTTACGTTT GACGATGGGG ATGCGTGCGA TCCGTGCGAT AGAGAGGATG GAGGGGAGGG TACTAGTGAT GTTGGGAGTG GATGTGAGAA TGAGGAGGAT GAATACCACG ACGAAGAGAA CGCGAACGGG TTTGGCGGTA AAAAAGCCAA GTATGAGGCA ATGGACGAGA AACTCACCAT GCCAGATCCG GATAAAGTGG ACACAAGCAG GCGAAAAAAA AGGTTGGCCG TACCGATGAA GAATCACGAG AGAGGAGTTA AATGGTTTGA AGTTTAAAGA GTCCTCCCAA GCTTCA
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Protein sequence | MVGRRRGKSG KIGQFFERIP LYFSYLILTS VWLLFMLFIT LGEVLIKRRQ IGRFLEQVIT FNTLLFFTVL SLITTSLRSP GSPDQTFAPT SYVPGFSLVR QRQERKQHLS KNNHLPVRPP IGKSKLKINI KTEPPPSLKF LRNPQWVSSR LHKDRPSPLP LFKNQSYPSI PSTADSPPSE NEKGSCESNN MGWSDLGSES ELESDYSPFP LSLSSRNSDR DKDVERNGDG GERDPLLILE EGRVPAHADM SEKVDSPTST STSTPAIDTS GKIQPRWCKR CDAWKPDRTH HCRHCHRCVL KMDHHCPWVG TCVGYRNYKP FLLFITYGTL LAIYTTFETG YEVYLYFFHP LDHPLPSHLG DLSSPSPLPA PVSLQLGPAV SIMLLTMGIF ITFSVGGLAC FHWWLASKNM TTLESITHSY PTSLLSSLPS NHNTSLSSPP ATAPNLSYKQ RQSLSRRAQE INVYDLGWRR NLKQVFFGGH NRHRDRGPDL GDGGRCEDED KRVTIGMVLG AMWPTKIGYD QSDPIAGSGY DFPYDPCALE RLKTLTEKLR SSTLTFDDGD ACDPCDREDG GEGTSDVGSG CENEEDEYHD EENANGFGGK KAKYEAMDEK LTMPDPDKVD TSRRKKRLAV PMKNHERGVK WFEV
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