Gene CND06360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND06360 
Symbol 
ID3257067 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand
Start bp1755840 
End bp1759351 
Gene Length3512 bp 
Protein Length752 aa 
Translation table 
GC content46% 
IMG OID638256575 
Productconserved hypothetical protein 
Protein accessionXP_570551 
Protein GI58266790 
COG category 
COG ID 
TIGRFAM ID[TIGR00728] oligopeptide transporters, OPT superfamily 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCTCGT ATAGGATAAC ATCCCTTATA GCCACCTCGA CAAGGCCGTA AACCAAACTT 
CTTTTCCCAA ATACCAGTCG ACTGCCATGT TTAACAGCAG TCGCGACAAT ACGACCGAGC
AGGAGAAGAA TGATGACGAA ATTTACACTA CGGAGCTGAA GGGTGATGAG TCTCCGTCCA
GTTCTTCCTC TGATATCGAC GAGAAAAACG AGAAATTCGA TCCGTACGTT GATCAGTCAC
AGGAAGGTAT CGCCGTCGAA GAAGCCAAGC TGGACGACTT CATTCATCGG GACGAAAAAT
ATGATTGGGA CTCTGAAGAG TTTCGCAACA TCCCAGAGCT AGTGAGAAAT ACTGTCAGCT
TTGAAGATGA TCCTTCGATG CCCGTTATCA CCTTCCGAGC CATTCTCCTT TCCACCATCT
TTTGTGCTAT AGGGAGTGTC ATCTCACAAA TCTCATAGTA AGTCCGAGCC GTTCCCTCAT
CTAGATGACA TATTGACGAG CAAGAATAGC TTCCGTACCA CAACGGCTCA GTTCCCTGTG
TTCTTCGTTA TCTTGGCTTC CCATCCACTT GGAAAATTGC TCGCGAGAGT TCTGCCCGAC
TACACTGTCC CGCTTGGAAG GTTCTCCTTC TCCCTGAATC CAGGTCCTTT TTCAGTCAAA
GAGCATGTCA TCATTGGTAT TGCGGCTAAT ACTGGAAGTC AAGGTCAATG GGCGAGTAAG
TGTAAACTTC TGGCGCGAGG GAGGCATAGG TTTTTTGACT GATGATGATC TCAGCCTACT
TGCCAACCAA TGCCGCTTTA TATTACAACA TCACAATGAG TCCTGCCATC GCGCTTTTCT
TTGGCTGGGT AAGCCTCTCT CGACCGAAGT ATTCGGAAAC TAAGCTGACT AGCTAATTTT
TCAAGGGTGT ATCACTTTTG GGTTTCTCGT TTGCGGCAAT GGTCCGGCCA ATTTTGATTG
ACGATCCCCA ATTCATCTTC CCTCTTTCTA TGCAGCAAGT CGCTGTCTAT CGAAGTATCC
AAGGAACTTC AGAGCTTCAC CTTGAACGAT CACGCAAGCA GATGAGAGTG AGTTCCTTCC
GATGTCAGGG CAAAACCAAT GTGCTGAAAA GACTTGAAGG TTTTCTGGTG GCTTTTCCTC
GGAATGTTTG CTTGGCAATT CCTCCCCGAG TTTGCCTTCC CTTTTGTGGC TTCCCTCGCC
CCCTTGTGCT GGTTTGCAAG CCGTAACCAC AAGGTGAACT TTCTCGGTGC CGGGAGAGGT
GGCGCTGGAC TATTGAACAT CACCTTGGAT TGGTCAAACA TCACATCAAC TGTTATCACT
TATCCTTACA GTGTGCAAGT AATCATCTTT GTTTCCTTTG TGATCGTGGT AGGTATTCAA
ATTGCTTATG AAATCCTTTT TTTCGAATTG AACTGATTTA TATTTGACTC TAGTGTTGGA
TCCTGATTCC TATCGCTTAC TTTGGTAACC TTTGGGGATC CCCCACATGG AACATCATGT
CCAACGGCGT CTTCATGAAG AATGGCACTT CTTATCCCTT CAACAGTCTT TGCAAGTTAC
AGTACTGAAT TCCAAAAGAT CGAAACTAAT ACTGACTCTC AGTGGATACC GACGCCCAAG
GCTTCCAGGT CTTCAATGAG ACCAGGGTAT GTTGTTGCTT TTCCAGGATC TCTCACTTAT
TGATGGGTTG CATGTGTAGT ATGAAGAGAT CGGCCTTGCA TACTCTGGAG CTCAGTACCT
GTGGAATGTC TTTATGGTAA GTTGCCATTT AATCCAAATT AAGATTCCTC CTTGCTGACC
CATCATAACA GTGGTATGCT TCATACATCT CATCTTTTGT ATGGTGCGGC CTCTTCTTGG
GTCCGACCAT CATGCACGTT TTTAGGGCTT GGCGTGCAAA GAAACCAGCT CATAACGATC
GTTTGAGCCG GATTGCTGCC AAATATCCTG GACTGACTTG GTGGTTAGTC CAACTTCTCT
GGATCTCCAT GTTCTTTCAC TGACGAAACA AATAGGGAAT GGGGACTTCT AACTCTTATT
CCCTTTGTGA TACTCTTGGC AGTGGTCGTC AGTAAGAAGC TCTATATGTC CACATGGACG
TACTTCGTCG CTCTCGGCTT CGGCGCTGCT GCCATGTTGC CCATGAGTCT GGTCTACGCC
ATGTCAGGAT ATTCGATGAA GGTCGGTATC TTTAATGAGC TAATTTATGG ATGTAAGTCT
CGTCATAACT TCACACATTA TCGGATCTCC GGGCTGACGT TGTCTACAGA CATGATTGAA
GCGAAAGGCT CATCTCGACA CCCATTGGGG CAGCTTGCAT ATCGAATCAT CTCGGGAAAT
GTCTGGTACG ATGCGCGAAC TGTCCTGGAG GACCAGAAGG TTAACGCACT CGGTTCATCG
AGTCATGCAG CCTAGGGCTA ATTCTTACTC TTAGATTGGA CATTACTTCC ATTTGCCACC
GCGACAGGTC ATCGGCATTC AAATCCTTGC CAACATGCTG GCTTTACCTA TCAACTACGC
GGTGATGCGT TGGGTCTTGG ACACCAAATT TGATTATGTT AGCGGGAAAG AGGTGGATCC
AACAGGTCAA TGGACTGGAC AAGAGTTCCA GAGCTACAAT TCTGCTGGTG TGCAATATTC
TCTCGTCGGG CCCAAGAGGT TGTTTAGATC CAGCGTCTAC AGGCCTTTGA CGTATGGTTT
TGTGTGAGAC TTCTTGTAAT CTTACAAAGC AACTTGTATG CTGACAAGAA CGGTCAGTGT
AGGTGCAGCT GCGCCCGTGA TCATTTGGCT CCTGCACAAG CGATTCCCTC GGGCTCGCTT
CAATCTCTGG AACACAACCA TCTTTTTCTC TGGTGCGGCC ACCTTCTATG GCAACTTGAG
TACTGGTCCA TTCACCGCTT TCATTATTGG AACGGTCTGG AACTTTTGGT TGTACAGATA
CAGGAGAAAG TTTTGGAACA TGTGGGCTTA CATCGTAAGT TGATCTACGT TCGGCTCGGG
GGACATGCTG ACGATTTCAC ACAATTGATT TACACGAACA GAGTGGTGCC GCCCGTGAGT
CCTCTTCCCA AGATCTTTCG TATCCATATT AATTAACCCT TTTCAATAGT CGATACCGGT
TTCAACTTCA ACTTGTTGTT TATCTTCATC TTTTTGGGCA CTACCGGTAA GTGTTACATC
TCCCGGCAGA GACTAAGTCA TATGATTGAT TCATTTGGCA GGTGCGGTCA TGCCTTACTG
GTGGGGGAAC AACGCCGACT CTATCGAAAG GTGTTTTGCC CTCAATGAAT AAGCTGGCAA
ATGTCTTTTG CCTGCTTCTC CGGACATTCG CCCTTCGCCG CCAGAGTTGA CACATCCTCG
ACATTTCCAG CATCTTTCAC CCTCAGCACT TGAACTAAAT AATGAACCGA AAGCTATCCA
TATGGATCAG CCATAACTAA TAACTCATAT CCCATCCCCT CAAAATTATT TTACATTTAC
CTTATTCGGT AGATATACTA TGTATACAAC TC
 
Protein sequence
MFNSSRDNTT EQEKNDDEIY TTELKGDESP SSSSSDIDEK NEKFDPYVDQ SQEGIAVEEA 
KLDDFIHRDE KYDWDSEEFR NIPELVRNTV SFEDDPSMPV ITFRAILLST IFCAIGSVIS
QISYFRTTTA QFPVFFVILA SHPLGKLLAR VLPDYTVPLG RFSFSLNPGP FSVKEHVIIG
IAANTGSQGQ WATYLPTNAA LYYNITMSPA IALFFGWGVS LLGFSFAAMV RPILIDDPQF
IFPLSMQQVA VYRSIQGTSE LHLERSRKQM RVSSFRYLKV FWWLFLGMFA WQFLPEFAFP
FVASLAPLCW FASRNHKVNF LGAGRGGAGL LNITLDWSNI TSTVITYPYS VQVIIFVSFC
WILIPIAYFG NLWGSPTWNI MSNGVFMKNG TSYPFNSLCN MKRSALHTLE LSTCGMSLWA
WRAKKPAHND RLSRIAAKYP GLTWWEWGLL TLIPFVILLA VVVSKKLYMS TWTYFVALGF
GAAAMLPMSL VYAMSGYSMK VGIFNELIYG CKSRSSRHPL GQLAYRIISG NVWYDARTVL
EDQKIGHYFH LPPRQVIGIQ ILANMLALPI NYAVMRWVLD TKFDYVSGKE VDPTGQWTGQ
EFQSYNSAGV QYSLVGPKRL FRSSVYRPLT YGFVVGAAAP VIIWLLHKRF PRARFNLWNT
TIFFSGAATF YGNLSTGPFT AFIIGTVWNF WLYRYRRKFW NMWAYISGAA LDTGFNFNLL
FIFIFLGTTG AVMPYWWGNN ADSIERCFAL NE