Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND06180 |
Symbol | |
ID | 3257478 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | - |
Start bp | 1706114 |
End bp | 1708827 |
Gene Length | 2714 bp |
Protein Length | 705 aa |
Translation table | |
GC content | 50% |
IMG OID | 638256558 |
Product | PH (pleckstrin homology) domain-containing protein, putative |
Protein accession | XP_570088 |
Protein GI | 58265864 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATCCACTGTC TGTATCCGCA ACCTACTCCA TCCTCTCTGC GTCTATAAAT GTCGGCCTTT CCATGCCTTG ATTAACTCGC CACTCTCCAT TTTCATCCTC CTCCTGTTGT TCGAGCAACA GAAGTCCTCA ACAGTGCAGT AACTGTCTAT TGTGCCAGTT CGACATATTT ACTTTTTGGT TCCCGTCGCC ATAGCCCTTA GCTAGGTACT GTAGATCCTA TAAGCTGTAA CATGTCTGGT CGTACGTATC ACCCTCGTCT TTACTTAACA TCAGCTAAGC TCACTCGCCA CAGCCCAGCA ACAGCCGATC CCTGCGCCCC CACCCTCTCA ATCGGAGATT GAAAGGAAGC TCTCCTTCCG CTCTACCGTA CCCGCTCGTC CTATTGACTC TCCTAAGAAA CCAAGGGTGA GTCACATACC ACAAGGGTAA AGCTGACTGT GTAGAAACTC TCACACACTC TCCCCCATTC TGCGTTGTCA GGCAATGATT CTGACTCTTC GATCGCATCT TCCGTGCCAG CTCAGAGCAT TATTTCTCCT AATGCTTCTG GCCACCCCAC TTCCCCGCTT CTCACCCCGG CTACAACATC TGTTGGTGGA TTGTCTGCTA TTGCCGAGAA CAAGTTTGGT GGCGATGAAG AAATTGTCTC GATGATGGAG TTGGAGGATG TAGAGGAAGA AGGCGAAGAG GCCGTTGAAG GCGCGGAGAG CGCGAGTGAA GATGAAGAAG CCCACGATGA GCTGCAGAGG GGTATGGAGG GTCAGAGGGT TGTAATGAGC GGGTACTTAT ACAAGAAGCA AGAAAAGAGA AGGGTGAGTA CTCGGTTGAA TGAGCATGAC TAATAGGTAG GCTTGGAAAA AGCGATGGTT CGTCTTGCGT AATGAAAAGC TGGCATACTA TAAGGATGAC AAGGAGTATT CCCTCAAGCG AGTGATTAAC CTTCGCGAGA TCCACACTGT CGCGCCTGTC GTCATCAAGA AACACCCAAA CACTTTCGGC ATTGTTGTGC CTAAGCGTAC ATTCTTCGTG AAAGCACCGT CTCCTGCGGA GATGGACGAG TGGGTTCATG CAATTAATGA GATGCGTCGA AGGATTTCGG AGAAGGAAGA AGAGGCAAAG AGGGATCACC ACCCAAAGTC CATGTCCATC CCTCGAAACC CACCAACTCT TCACTCCATC GACACTGTCT CGCCTTCCAA CGCAACCTAC ATAGGTCCTA TGGTCTCTTC TCCTCAACCC ACCGTCTTTT CTCCCTCCAG CCCTATTGAC AACAATTTGA CTTCACGATT CGCCAAGATA TCCCTTCCTT CTCGATCACC AAGTAATCAC ACGTTGCAAG GATCCCATAT TCCCTCTGGT ATCAGCAGCA TCGCCTCTCG AGGGGTCAGT GGGTCATCCA AGCGCGAGCC GTCGACCGGA AGTATATCCT CTGCCGATCA TCTTCGCAAT GTACGTCCAC CAGTAAGCTC CGAAGATGAA GATGAACTCG AAACGCCGGT CGCACCTGCA GACCCGAAAA AAGTAATTCT GTCGGCGTAT TTGATGAAGC AGAGCAAAAG AAGGAAGGAT GTGTGGAGAA AGAGATGGTT TGTATTGACT TCGTCTGCGC TGGCGTATTC GAGGAGTCAT ATGGTAAGCT ACTCTCACTC GCACTCTTCA CAAGGCGATC CTAATCCTAT GATACAGGAG ACCAAGGCTC AACAAGTCAT CCCCCTTTCA TCCATCCTCG ATGCTCTTGA AGTCTTGGAC ACTGCATCTG ACGGAAACGA ATCCGATCGT CTCTCCGCAC ATGGCCACAC TCATCCCGCT CATTCGAATT CACACCATTC TTTCACACAT GCTCAATCTC CCACCTCATC CTCACGCCAA TTCATGCGCG GCCGTTTGGG CTCTAATTCC ACTTCCGCTG ATACACGGCT TTCGAAAGAC GATGAGCACA TCTTCAGGTT GATCACTGCT AAGCGGACTT TCCATCTCTG TGCGCCTACG GAGGAAGATG AAATCAAGTG GTTGGCAGCG TTCAGGGCTT TGCTTGAACA ACAAAGAGGA GAGAGGAGTT CGTCGTTCAA TGTAGGCGGC TCCTCTGCTC AATCAAGTCA GCAAGCCCAA GCGCAAACAC AAGCACAAGC ATTGCCTCAG GGGCAAGGAA AAAGAATGAG CGTCCCAATT ATCACTCAGC AACCTCCCAC CCCTGGACTG TCTAGTTCCG TATCTCATAG CTCAAGCGTA CAAGAACCAA TGTCGGCAAG TTCTGTTCTT GAACCACCTA TTCCTGCCTC GGGAGTGGCG TCTCTACCTG CTTTACCCTC AGCGTCCCAA ACGGCGTCAA CACCAACATC AACGCAATCA CACTTACAAA CTCAGCAGTC TCAAGCTCAA GATCCCTCAT CGGTTCAGTC TCAAGTATAT GTAGGAAGCG CGCCTTCTTC CCACGCGGGG CAGAGAGGAC GAAGTGCGAC ATATACGGCG AAGAGTGCAG TAGCGGATGT TGTGAGACGG TTCCAAGCCG AGAAGGAGAG AGAAACATGA GGGAAATGCA TGACGGACTT GACTAACGTT TAATGCGGGG GGTTACGCTT GGCTTAAATT GCGTGTTGTG CATACAGTAA ATGTTTCGTT TCTGTAAGTA AGAAAGATCT TAAATCAAAC TGAAGCAAGG ATCCTTGTAG TGTATGGGGT AGCGAGAAGC GATTAAAATA GAAATTATGG GTAT
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Protein sequence | MSGPQQQPIP APPPSQSEIE RKLSFRSTVP ARPIDSPKKP RKLSHTLPHS ALSGNDSDSS IASSVPAQSI ISPNASGHPT SPLLTPATTS VGGLSAIAEN KFGGDEEIVS MMELEDVEEE GEEAVEGAES ASEDEEAHDE LQRGMEGQRV VMSGYLYKKQ EKRRAWKKRW FVLRNEKLAY YKDDKEYSLK RVINLREIHT VAPVVIKKHP NTFGIVVPKR TFFVKAPSPA EMDEWVHAIN EMRRRISEKE EEAKRDHHPK SMSIPRNPPT LHSIDTVSPS NATYIGPMVS SPQPTVFSPS SPIDNNLTSR FAKISLPSRS PSNHTLQGSH IPSGISSIAS RGVSGSSKRE PSTGSISSAD HLRNVRPPVS SEDEDELETP VAPADPKKVI LSAYLMKQSK RRKDVWRKRW FVLTSSALAY SRSHMETKAQ QVIPLSSILD ALEVLDTASD GNESDRLSAH GHTHPAHSNS HHSFTHAQSP TSSSRQFMRG RLGSNSTSAD TRLSKDDEHI FRLITAKRTF HLCAPTEEDE IKWLAAFRAL LEQQRGERSS SFNVGGSSAQ SSQQAQAQTQ AQALPQGQGK RMSVPIITQQ PPTPGLSSSV SHSSSVQEPM SASSVLEPPI PASGVASLPA LPSASQTAST PTSTQSHLQT QQSQAQDPSS VQSQVYVGSA PSSHAGQRGR SATYTAKSAV ADVVRRFQAE KERET
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