Gene CND06110 details

Gene Information

• Locus tag: CND06110
• ID: 3256840
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006686
• Strand: +
• Start bp: 1684257
• End bp: 1686246
• Gene Length: 1990 bp
• Protein Length: 523 aa
• GC content: 48%
• IMG OID: 638256551
• Product: squalene monooxygenase, putative
• Protein accession: XP_570092
• Protein GI: 58265872
• COG category: [C] Energy production and conversion; [H] Coenzyme transport and metabolism
• COG ID: [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.426189
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGTCCACATT TATTCTCTAA AAACCACGAA AAAATACCAC AAAGATGCTT GCGATGACCC 
CTCCAATATC ATCCCCCGAA ATAATCATAA TAGGTGCAGG AGTTATCGGC TCGGCGCTCG 
CTTACTCCCT CTCTCACACC GGTCGCAAGA TCCTCCTCCT CGAGCGTGAC CTCTCAGAAC 
CAGATAGAAT CGTCGGTGAA CTCCTTCAAC CCGGTGGCGT AGCTGCACTT GCTCAACTCG 
GGATGGTAGA TGTGCTGGAA GGGATTGATG CTGCGCCTGT GGAAGGTTAT TGTGTAGTGA 
ATGGCGAGGA GAAAGTCGGT GTGAACTATC CTCAGGTAGA TGGGAATGGT CACGGCAAGC 
TTATCGATGA GAAGGTCAAC GGGAAGAATT GGCATGTAGC TACCACTTCC GGGCTCAAAG 
AAGGTCGTTC ATTCCACCAT GGACGACTGA TATCTGCTCT CCGACGCAAG TGTATCGATC 
AGGCGCCCAA TGTTACAGTC GTTGAAGCGA CCGTCAAAGA CTTGCTGTTC TGCGAACACA 
CCAACCAAGT GATCGGAGTT TCCGCTTCTT TCAAATCCGC ATCTGGAAGA GAACCCAACG 
TCCGCAAATT CTATGCCCCC CTTACTGTCA TTGCCGATGG CTGCTTTTCT AAATTCCGTC 
ACCATCCCGC GCTTCGAACC AGGGTACCTG ATACCAGATC ACATTTCGTT GGACTTATCC 
TCCAGAACTG CGAACTGCCA ATGAAACACT ATGGCACTGT CTGTCTCACA CCGAATGGAC 
CTGTCTTGCT TTATCAAATT GGGAATGAAA AGGGCGAGGT GAGGATGCTC GTGGATGTCA 
AGGGCAAGCT GCCTAGTGTT GGAGACGGTT CTCTCAAGGT GAGTTTGAAA TTCGCATATA 
TAGCAGAATT CGTACTGATA CTTTTTACAG CAACACTTAA TTGACAACTA TCTCCCATAC 
ATTCCCGCCT CACTTCGATC TCCTCTCCTC GACGCTCTTT CCACTCAACG TCTCCGCTCC 
ATGCCCAACT CCTACCTCCC TCCCTCCATC CAGGGTCTCC GCTCCAATCT TCAAGGCGCC 
ATCCTCGTTG GTGACGCCTA CAACATGCGT CATCCCCTTA CAGGTGGTGG TATGACAGTT 
GCTTTCAATG ATGCTGTCCT CTTGACGGAA TATTTGAAAC CTGGCGGCAA GTTAAGGCGA 
AAACCTTGGG AAGACGGATT AGCCCCAGGT AGAGAGGGGT TGGAGGATTG GGACAAGATT 
GCGGAAAGGC TGAGGGAGTG GTTCTGGGAG AGAAAACAAT TGAGCGGTGT CGTAAATGTG 
CTTTCTATGG CTCTTTACAG CTTGTTCGGT GGTTCGGACA GTACGTCGCG TCGATGCGTC 
TTATATTCCT TGGAAACTAA CCTATTGTCT CAGAACCAGA TCTTGCGATC CTAAGAGAAG 
GATGTTTCAA GTACTTTGAA TTAGGGGGAG AGTGTGTGGC TGGCCCTGTC GGATTGCTTT 
CTGCGTGAGT TATCCACTTC CTATTTTCCG ATCATTACTC ACTCATTCTC TCTTGTTAGT 
CTCACACCGC GCCCTGTCCA ACTTTTCTAC CACTTTTTCA ACGTCGCCTT TTACTCCATT 
TACCTCCTAC TCATCCACGG TCCTCCCCAG CGTAGAACAA ACGGATCTGT AGGAGCCATT 
GCCATGTTAC CATTGAATTT GCTTTTAAGT TTCAAGGTGG TACGTGTTAT ATATTTTCTT 
CACCTAGTTG AGGATTCAAC GGGCTGATCA TTGATTTGGA TGATAGTTCT ACACGGCTTG 
TGTGGTTTTG CTGCCGTTCA TGCTTATTGA ATTTAGAAGC TAAAGAGCGT AGATTTACAT 
AGAAATTTTG AAGCTTGGCT CATGGAAGGC AACGAGCTTG AAGAGTTAAT TGATGGATTT 
TGGAACAGCA TCTTCAATTA TGTCTTAGGT CTAGGGTTTT CTTTTCAGAT TTGCATGTAC 
TATGTCTTGT 

 

Protein sequence

MLAMTPPISS PEIIIIGAGV IGSALAYSLS HTGRKILLLE RDLSEPDRIV GELLQPGGVA 
ALAQLGMVDV LEGIDAAPVE GYCVVNGEEK VGVNYPQVDG NGHGKLIDEK VNGKNWHVAT 
TSGLKEGRSF HHGRLISALR RKCIDQAPNV TVVEATVKDL LFCEHTNQVI GVSASFKSAS 
GREPNVRKFY APLTVIADGC FSKFRHHPAL RTRVPDTRSH FVGLILQNCE LPMKHYGTVC 
LTPNGPVLLY QIGNEKGEVR MLVDVKGKLP SVGDGSLKQH LIDNYLPYIP ASLRSPLLDA 
LSTQRLRSMP NSYLPPSIQG LRSNLQGAIL VGDAYNMRHP LTGGGMTVAF NDAVLLTEYL 
KPGGKLRRKP WEDGLAPGRE GLEDWDKIAE RLREWFWERK QLSGVVNVLS MALYSLFGGS 
DKPDLAILRE GCFKYFELGG ECVAGPVGLL SALTPRPVQL FYHFFNVAFY SIYLLLIHGP 
PQRRTNGSVG AIAMLPLNLL LSFKVFYTAC VVLLPFMLIE FRS