Gene CND05980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND05980 
Symbol 
ID3257249 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand
Start bp1643435 
End bp1645618 
Gene Length2184 bp 
Protein Length618 aa 
Translation table 
GC content49% 
IMG OID638256538 
Productnucleoside transporter 
Protein accessionXP_570101 
Protein GI58265890 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGACTA ATCTCGAATC GGAAACCTCT TTCGACAAGG CCAACAACAC CACCGGAGTT 
CGGGTCCTTC CCATATTTGA AGGTGAACCA GCCCTTGGCC ACGTTCCAAC CTCAAGGAGA
AACAAGTTCA AATCGGTCAT GAAGTCTTTG GTTACCAAAG ATGGATGGTT AGGCAACTAT
GTGAATAGAT CTCGCTGGTT GTCAAAATGA CTCAGTACGC TGACGTTGGT CTATCGGATA
GGATTATGGG GCTCTCATGA TCCCTTACAT TCCCTATATC ACCAAGAAGC AGAACAAGGA
ACTGCCATTC TACGGCGTTA ACGAGAGACT TCCCCATCTC CTCTTATTCC TCTTGGGTCT
TCAACAGTCA GTCACATTAG TTCTTCCTTC CATTCCCCAG CTTACACACC ATCAGTGCTC
TTGCCATGGT TGGTGGTCTC GTTACCCCCC CTCTTCTTCT CGCCGGTCCT GCGGGTGCCA
ACCTCGGTAC CGAGGCTCAG CTCTACCTCG TCTCTGCTTG TCTTATCTGG TGTGGTATCG
GTACATGTAT CCAGGTCAGC CGTGTCAAAA TTTGGAAAAC CAATTACTAC TTTGGAACTG
GTTTGATCTC TGTTACTGTG AGTCAGTCGT CCTGTTTCGA AGGCAATGCG CTAATAGAAT
AGGGTACTTC TTTTGCCTTT GCCAACGTCG CTCTCTCCTG GTTGTCTCAA GCAGTAAGTT
TCTTTTTCCA CACTCACCCC ATCGCATGAA TTGATTGACG ATTCAAAGTA CGCCGATGGT
ACTTGCTCTT ATGCTGAAGA TGGTGTCACC AAACTTCCAT GTCCTGACGA GTTTGGAGCC
ATCCTCGGTA CAGCCACTCT CACCGGTATT TTTGCTATCG GTCTCGCCTT TGTCCCTCCC
AAGGCTATTC GAAAGGCCTT TCCTCCGCTT ATTACAGGTA CCATGCTCAT GTTTATTGGC
GCTGCTCTTG TCTCTTCGGG TGTCAATAAC TGGGCTGGTG GCTCCGGTAC TACCTGCGCG
TCTGACCACA CTGTCAAATG TGTGGCTGGT ACCAGGGAGG AGTATTGGGG TTCCGCTTCC
TTTATCGGTC TTGGTTTCTC TTGTTTCGCC GTCATCGTCC TTTGTGAGCT TTTTGGTTCA
GCTTTTATGA AGTCGGCCTC TGTCTTCTTT GGTCTTATCG TCGGTATGGT CATCGCCGCT
GCCACTGGTT ACTTTGACAA GGGTACTATT ACCAGCGCTC CTGCCGGTAA TTTCCTTTGG
GTTCACACTT TCAAACTGTC TTTGCGCGGT CAACTTGTCT TACCTATGAT TGCTGCTTGG
GCCGTCATCA TTGCTGAGAC CATCGGTAAT GTCACCGCAA GGTTAGTCAT CCTTTGCTGC
CTCAACAACA TCATCACATA ATGACTTTAT ATCCGTAGCT CCGACGTCTC TCGCTTAGAA
ATTTCGGGTG AAGGCTTTAT GTCCCGGGTT CAGGGCGGTA TGCTTGCAGA CTCTATCATG
GCCACCATTG CCGGTCTCGC CACTGTCCCA CCTCTTACTA CCTTTTCCCA AAACTCTGGT
GTCATCGCCC TTACTCGAAA TGCTTCTCGT TCTTCCGGTT ACATGTGTGC TTTCATCTTA
TTCTTGATGG GTATCATTGG TAAATTCGGT GCCATATTCT GTGCTGCCCC CAGCTCTGTC
ATTGGCGGTT TCACCACCTT CCTGTTTGGC GCTGTCACTA CCTCTGGTGT CCGAGTCCTG
GCCTACTGCA AGTGGACTCG ACGAGACCGA TTTATTGCTA CTGTTGGTAT CGCCCTCGGT
ATGGCGAGCT TGTGTGTGCC CGATTGGTTC AGCTACTTTT TTACTTACAC CGGTTCCAAT
GGTGAGCCTC TTCTCTCTCT TTTTCAACGC TTTTAGATGT TAGCTGACTT ATTAATCTTA
GACGGTAAGA GGGGTCTGCT CCAAGCCATT GTCCTCATCG TCGAAGAGCC TTACCTCATC
TCTGCCTTGG TCATGATCTT TCTCAACCTC TGTATCGCCG ACGAGTTCCC TGAGGAAGGA
TCTTCCTCTA CCGAAGAACA GAAACGGGAA TGGAACGAAC CAATTCCCCT TGCGGGCGGC
CCTTCCGGTA TTTTGCACCA TACCACTTCT TCTTTGTCTG TCGAGCGGGA GAGGGAAGCT
GAAGGTGTTG AGCTTAGAGA TTAG
 
Protein sequence
MSTNLESETS FDKANNTTGV RVLPIFEGEP ALGHVPTSRR NKFKSVMKSL VTKDGWLGNY 
DYGALMIPYI PYITKKQNKE LPFYGVNERL PHLLLFLLGL QHALAMVGGL VTPPLLLAGP
AGANLGTEAQ LYLVSACLIW CGIGTCIQVS RVKIWKTNYY FGTGLISVTG TSFAFANVAL
SWLSQAYADG TCSYAEDGVT KLPCPDEFGA ILGTATLTGI FAIGLAFVPP KAIRKAFPPL
ITGTMLMFIG AALVSSGVNN WAGGSGTTCA SDHTVKCVAG TREEYWGSAS FIGLGFSCFA
VIVLCELFGS AFMKSASVFF GLIVGMVIAA ATGYFDKGTI TSAPAGNFLW VHTFKLSLRG
QLVLPMIAAW AVIIAETIGN VTASSDVSRL EISGEGFMSR VQGGMLADSI MATIAGLATV
PPLTTFSQNS GVIALTRNAS RSSGYMCAFI LFLMGIIGKF GAIFCAAPSS VIGGFTTFLF
GAVTTSGVRV LAYCKWTRRD RFIATVGIAL GMASLCVPDW FSYFFTYTGS NDGKRGLLQA
IVLIVEEPYL ISALVMIFLN LCIADEFPEE GSSSTEEQKR EWNEPIPLAG GPSGILHHTT
SSLSVERERE AEGVELRD