Gene CND05870 details

Gene Information

• Locus tag: CND05870
• ID: 3257301
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006686
• Strand: -
• Start bp: 1602838
• End bp: 1609142
• Gene Length: 6305 bp
• Protein Length: 1858 aa
• GC content: 49%
• IMG OID: 638256526
• Product: conserved hypothetical protein
• Protein accession: XP_570544
• Protein GI: 58266776

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGCCAT CAAGCCAACA AACGACCGCT CCCGGGCCCT TGCCGGCCAC GCCCGACCAG 
TTGTCACTGC GTCAGCGTCA TCCTTCATCC AAGCAGGGCA CGCCCCGTAA CCTTGATGGC 
CCATCAAGCT CCAAGCCTTC TCCTTCCGAG TCTGCTCGGC GGGGAAAGCC CAATTTTTTC 
TCTTCAATGC ATTTCTCTCA AGCACTTCCG CAATCAATTC CTTCGATGAT TCCGGATGAG 
CCTCCACCTG AACTTCAGCG AAGTCAGCGT AGGTCCAAGG TTGAAGCGCT TACAAAACTC 
GATCGTACTG GTACACCCAT TCAATCCGCC GCTGGGCCTG CTGCAACGTC ATTCGTACCC 
CACACAATTC AGAAGTCAAC CCCTCCACCA TCTGCTCCGC ATTATTTGCG GAACCCGCTC 
CATCGTCCGA AAGTCGTCAA TCCGCCCTTC TCCATCGATA GTGTGCGCAC AGAAGCTCCG 
CGTCATCCTC ATCTCCGTAC CGAGCCAAGG CTTTTTGGAT TAGGAGATTG TCCTACTTTT 
TATCCCACTC CTGAAGAGTT CAAAGACCCT ATGGCTTATA TCGGCTCCAT CGCCCAGCAA 
GGTAAAAAGT ATGGAATGTG CAAAATTGTG CCTCCGGAGG GATGGCATAT GCCTTTCCGA 
CTGGAGACAG AAACATTCAG GTTCAAGGCA AGGCTGCAGC GACTCAATCA GCTCGAAGCC 
GCCTCCCGGG CCAAGCTCAA CTTTCTGGAA CAACTTTCCA TGTATCATAT GCAGCAAGGC 
GACTCTAAAA TCCATATCCC CCTCATAGAC CGGCAACCTC TTGATCTTTG GAAGCTGAGA 
AGGGAAGTCA ACAGGTCCGG AGGGAACCTG GAGTTGGACA GGACAAAAGG TTGGTCGAAG 
ATCACTGTAA GTCTCGGTCA CAAACCCTCT TGGGCCCCCC ACGTTCGGGC TGCCTACATG 
AATATCGTTC TGCCCTTTGA CAATTGGGCT GTAAGGGCAA GACCAGCATC CGTTTCACCT 
TTGGCCAGAC TCAATCCTCG TAGCAGTGGC TCACCCTCTA AGCCGCCTCC TCCCGTTACC 
AACGATAATT TTTCTGCATC TCCCGTAAAA GGTATCAGCA GAATGGGTAC AACTTCGCAT 
TACCCAATTT CCAAAATCCG ACCGAATGGC ATGCCCTTTG TGCCTCCTCC TGATAACGGG 
CGGTCGCCGT CAAAGTGTGC ATCACTCAAT TGTGGTAGCG CTTTGGGGGA TGTGAATGAG 
ATTAACGAGC CAAGTCCGTT GTCAATATCC CCATCGGCAA CAGCAAGTAC TCCGACGACG 
TTAAGGATAA ACGTGCCCGG GTTTTCGGAC CAGGAGGGCA GCGACAGTGA ACTGAGTGAT 
GAGGATTCAG CCTTATCCCC ACCGTCAATT AGGAAAGCAC CTTTCGAGGC AGAGTATCAA 
AAGGGCGAAG TGAGTTGTTA TTAACGTCCC TTAGTCACAA TACCAATGAT AAATCACAGG 
TCTGCGAGAT ATGTAAAGGT GAACACGACG CGGATAAGAT TCTCCTCTGC GACGGCTGTG 
ATAGAGGTAA TTAATTCCGA CATCAAAGCT GCAACTTTCT CACTCCTTTT TATACGCAGG 
TTTTCACATT TATTGTCTGG ATCCTCCTCT GGCCTCTGTT CCAACCAATG AGGAATGGTA 
CTGTACATCG TGCCTTCTTT CACAAGGTGA AGATTTTGGA TTCGAAGAAG GTGACGAGCA 
TTCTGTTGCA AGCTTCCAAG CCCGTGATGC AGCTTTCTCC TATGCGTGGT GGAACCGCCA 
CATGCCCCAC AGCTCATCCC GGACATCCAT TAATGAAGCT CAGCCTACAG ATGATGGCGA 
CAATGGGCAG GTGAAGCCTA GACAACTCGG CAAAGTGACG GTCTCAGAGG ATGATATAGA 
GCGAGAGTTT TGGAGGCTTA CGGAAAGTTC GCTCGATACG GTCGACGTGG AGTACGGAGC 
GGATATTCAC TCCACTTCAC ATGGAAGGTT GGTTCTGGTC CTTCCCGGGT GGTTAGGTGA 
AAAGCTGATA GTCAAATAGT GCTGGTCCGA CTCTCGAGAC TCACCCCCTT GATCCATATT 
CAAGGGATCC TTGGAATCTC AACAACATGC CCATCCTTCC AGATTCGTGA GCCTTTTACC 
TCTTCGTTGT CATCATTGAT ATTAAGCATC AAAAGCTTGT TGCGTTACAT CAAATCCGAT 
ATTTCGGGCA TGACTGTACC ATGGATTTAT ATAGGGATGA TGTTCTCCAC GTTCTGCTGG 
CATAATGAAG ACCATTACAC ATATAGCATC AATTATAGTA TGTTATCATA CGCGTTCAAG 
GCATCACTAA CCAACCTTCA GTGTACTGGG GCGAGACGAA AACCTGGTAC GGTATTCCCG 
GCAGTGATGC TGAGAAGTTT GAAGCCGCTA TCAAATCAGA AGCGCCTGAT CTTTTTGAGC 
AACAGCCTGG ACTTCTGTTC CAACTTATTA CAATGATGAA TCCGGGTCGA CTCAGCGAAG 
CTGGTGTCAA AGTCGTGGCT TGTGATCAAA GGCCGAATGA GTTTGTGATC ACATTTCCGA 
AGGCCTATCA CTGCGGTTTC AATCACGGAG TAAGTTTCAA GTGATGAGCG CTTCATTTGA 
GTGCTGATCG GGAGGGTGCG TAGATCAACA TGAACGAGGC TGTCAATTTT GCACTCCCCG 
ATTGGTTGCC CGATGGTAAG GAGAGCGTGC GACGATATCG GGAGCACAAT AAAGCACCTG 
TGTTCTCGCA CAACGAACTG CTTATTACCA TTACCTTGTT TTCGGAGACG ATCAGAACCG 
CCCTTTGGTA CGCATCACCT AGCAACAAAT AAAAAGGGGC TGATCCGTTT ATCCACATTC 
AGGTTGAAAG ACGCCCTCAT CGAAATGGTC GACGAGGAAA CAGCACGTCG GGGGGCTCTA 
CGTACCAAGT ACCCTAAACT AGTGGAATAC CTAATCGAGG AGGATTGTCC AGAGGAGCAG 
TATCAATGCG CCATTTGCAA GGCGTTTTGT TACCTTGCCC AAGTTACATG TTCGTGTACC 
AGTCAGGTCT CATGCCTATC CCATGCCGAT CAGCTCTGCA CTTGTAGAAA GCCTCGTAAG 
GTTCTAAGAA TGAGATATTC AGAAGCCCAA CTAGAGGATA TCCGTGATGT TGTGGTACAT 
CGAGCAGCTC TCCCCGAGCA ATGGCGCGTC AGATTCCTCT CATTGATGGA AAGCCCTAGA 
CCACAGTTGA AATCTATGCG AGCTCTTGTG TCGGAGGGGG AGAGGATTGC GCACCCCATA 
CCCGAACTTG GACCATTGAA GCGCTTTGTG GATGTCGCCA CGTCACTAAT TCAGCAGATT 
ATGGCCATAA CGGCAAGAAA GAGCGCCGGA AGGCGAAAAA AGGCAAGCAG AGTGGATAGT 
GACCGCAAGG GCAAAAGAAC TAGGGCCGAC CGGGACGATG GAGAAAATGA TGGTATTGAT 
CGCAGCCCTG GTGTCCTCAC AGGCCTTTTA AAGCAAGCTG ACCGGCTTGC ATTTGATGCC 
CCTGAGCTTC CGCAGCTCCG ACAACTTATG GTGACTATCG AAGACTTCCG TACAGAGGCG 
TCTTCTTTGC TCGCAACCCC TGAAGATCAA CTTGATCGTC AAAGGTGCAA GAACGCCTTG 
ATACTTGGCC AGTCATTTGG CCTTGACTTC CCGGAATTGC CACCTCTAGA ACAACTGGTT 
CAACGGCAGG AATGGTTTAG ACAGCTCGAA GAAGAAATTG ATGACGCGAA TATGGAGTAT 
GACGATGTTG TCGCGCTCTT GGAGGAGTCA TTGGAATGCC AAATCCCTCG GGATCATACG 
ATGGTCAATG AGCTCAAAGT TCGAGAAAGG AAGGGTAAAC AATGGATAGA CTCCGTCGAG 
AGGTTGCTGG CATCCTCTCA AATCACCATC AATGATATTT CCGCGCTCAT TGAGGCAAGG 
CGGCACGTCC CAATCTCCAT CGATATTCTT CGCAAGTTGG AAAGTCTTCG TAAATCCGCC 
ATTAGCTGGC AAACTTCTGC AAGAAATGTT TTTGCAACCA ATGGATCGTC TGTGGCTGCT 
TCTAGGCTTT GCAAGAACGT TGTGGCTGCT TCAAAACCAC TGAGCAATGT AGTTATCCCG 
GAAATACGCC AGTTACAAGC CGAGCTCGAG CATCATGCCC TTTGGAGGGA AGAGGCCAGC 
AAGGTTTTAG GCGTTCCAGT TGCAAGACTT GCCTCTACCA TTGATTACAT CCGCAGCGCG 
TTTGAAAACA GCCTTGCACC AGATGACGAT GCGCACAACA ATCAGAGGGT CTGTTTCTGT 
CGGTCGTCAC CAGCAGATAA CATGGTTATG TGCAAAGTTT GTCAGCACAG CTACCATCCC 
CGATGCGTAG ATGTGTCCCT CCGCCATGTT CCAGAAGAAT TCAAGTGCGC TATGTGCCAA 
CGTTTGCCCA ACGACGATGG CCCCTCCCTC GATGCTTTCA TTGGTCTAAT CTCCCCACAA 
CGTTGGAACT TCCTTATAAA TCCATTGGAG TTTGAACTCG CTCAATATAT TGCTTCTGCA 
GCTATCCGCT ACGCTCCTCA AGCGTTCCGC CTGGCTGATC CCCTCAGTCT TTCTCCTCCT 
TGCCGGGATT TAGAATTGCT TCGACATACT ATCCGCAAGA TCTATACCTT GCCACTCGTA 
TTTGACGCAC GTAACTCTCA GACTAACGAA CGCTGCGTGT TCGTAAACTG GCTATTTAGG 
AGGATGCAAG ATGCTATCAG GATGAAGGCG AAAGAGATCT CATTGTCAAC TGTTGGTGTG 
CAGTCGAAGG TGGGCCGTAG ACCTTCTGTG GCTTTGGCAG CTGGGCAATC TACTTTGATG 
AACAGTGAAA ATGGGACGCT TTCAGGACGC GCAAGACCTC GTCGAAGAGC ACGTATCATT 
CTTGCAGAAT CACATCCTCA CGAGTTTTAT TGTCTATGTG GGATGTCGTC CGCGGGCGAA 
AATACTACTG CACAGATTGA GTGTCCCAAA TGTGGACAGG GATACCATGC GGGTTGCGTC 
AAGATGACGG AGGGGCTTGC AGGGAAGTCT GTTTGGACAT GCCCATGTTG TACAGTTCGA 
GATGGGAGGC ATTATCAAAA GGGTGTCGAG GTTCGAGTTC AGCTCAGCTG TAAGTTGTCC 
ACGTTATGGA TTTTGGATAT ATAATTGATC AATTGAGGAT AGCACATCGC GGAACGGACC 
AATTTCTTGA CTATCACACC ATCATAAACG ATTTTGCGGA CCGCTTAGTT GTTATAACAA 
AACCTACTTC TGCAAGCGCC ATTACTCTGG AGTGCATCGA CTTCGTGCCT GCACGTATTC 
CGAATAATGT GAAAACGATG GAAGAGAGGG AAGACTCTTT GAACAGGATT AAAAAGAGGA 
AATCTGGAGG AGTTGACGGA GGTTTCCGGA ATGAGCAAGC AACGAACAAC CCTGTCGCCC 
ATGGTTTGAA GACAGTGGCT GCCAAGGGTT TTATGGGCCC TCCCTCGACA ATACTCAACA 
AGATCCCCAC ACAGACAGCA AGCTCTGAAT TCGGTGGCTC CTCAGTTGCT ATGGGTGCAT 
TACCTGACAC GCAAACAAAA TCCAGCGCTG TGCCACGCAC CATTTACACC CCTGCCGAGT 
CGAATGCCAA TACTTCCGTT TCTTTGTTGA CACCCACAAT CCAAAACCGG TCAACTTTCG 
ACTTGCGTTC TGATTTTGGT CTAGAATCTT GTTTCTCATC AACGCCCGTT GCTACCGGAG 
CGTCTACTAC GTCCATAGTG CGGCAAAACG GTTGCACCGC ATCAGCCACC ACTATATGTT 
GCGAAGGACG AGCAACGGCT GTAACTGGGA AGAGTGTTCT TGACGACAAT ATCGATTCAC 
GTGAAGGCTC TGAAGAAAGG TATTCGTATT CGGATATGGG AGAATTCACT GCCGTTAAGG 
AGGGGCGTCA TGTTGTCGAT GAAGATGTTA CTATGGAGAA CCAATAAGAG GTTAATGGAT 
TATTGCCACG TTTACGGCAT GCGAGATATA AGAGAAGGCG CTTGTAGGAC AGTCGGTGAT 
CGTCTCTTCT CATCTCATGA TTCTATGGTT GAATCCCGCT TTAAGACGTA TATGCGGATT 
ATAACCTGAT ATGCCGGTCT TTATATTTAG TTGAGTATAT ATGAGTTGCA TTTGGTGGTG 
GGTAAAGTTA ATTTGAGTTT GACATTTTTA CCCCCGTAAC TTTCAGAGTA TAAGAACATT 
GCTCCCACCC CTCCGCCCCT GTATAGTTAT ATAAGTATGC TACTAAAAAT GTAAAAATGG 
TTCCG 

 

Protein sequence

MLPSSQQTTA PGPLPATPDQ LSLRQRHPSS KQGTPRNLDG PSSSKPSPSE SARRGKPNFF 
SSMHFSQALP QSIPSMIPDE PPPELQRSQR RSKVEALTKL DRTGTPIQSA AGPAATSFVP 
HTIQKSTPPP SAPHYLRNPL HRPKVVNPPF SIDSVRTEAP RHPHLRTEPR LFGLGDCPTF 
YPTPEEFKDP MAYIGSIAQQ GKKYGMCKIV PPEGWHMPFR LETETFRFKA RLQRLNQLEA 
ASRAKLNFLE QLSMYHMQQG DSKIHIPLID RQPLDLWKLR REVNRSGGNL ELDRTKGWSK 
ITVSLGHKPS WAPHVRAAYM NIVLPFDNWA VRARPASVSP LARLNPRSSG SPSKPPPPVT 
NDNFSASPVK GISRMGTTSH YPISKIRPNG MPFVPPPDNG RSPSKCASLN CGSALGDVNE 
INEPSPLSIS PSATASTPTT LRINVPGFSD QEGSDSELSD EDSALSPPSI RKAPFEAEYQ 
KGEVCEICKG EHDADKILLC DGCDRGFHIY CLDPPLASVP TNEEWYCTSC LLSQGEDFGF 
EEGDEHSVAS FQARDAAFSY AWWNRHMPHS SSRTSINEAQ PTDDGDNGQV KPRQLGKVTV 
SEDDIEREFW RLTESSLDTV DVEYGADIHS TSHGSAGPTL ETHPLDPYSR DPWNLNNMPI 
LPDSLLRYIK SDISGMTVPW IYIGMMFSTF CWHNEDHYTY SINYMYWGET KTWYGIPGSD 
AEKFEAAIKS EAPDLFEQQP GLLFQLITMM NPGRLSEAGV KVVACDQRPN EFVITFPKAY 
HCGFNHGINM NEAVNFALPD WLPDGKESVR RYREHNKAPV FSHNELLITI TLFSETIRTA 
LWLKDALIEM VDEETARRGA LRTKYPKLVE YLIEEDCPEE QYQCAICKAF CYLAQVTCSC 
TSQVSCLSHA DQLCTCRKPR KVLRMRYSEA QLEDIRDVVV HRAALPEQWR VRFLSLMESP 
RPQLKSMRAL VSEGERIAHP IPELGPLKRF VDVATSLIQQ IMAITARKSA GRRKKASRVD 
SDRKGKRTRA DRDDGENDGI DRSPGVLTGL LKQADRLAFD APELPQLRQL MVTIEDFRTE 
ASSLLATPED QLDRQRCKNA LILGQSFGLD FPELPPLEQL VQRQEWFRQL EEEIDDANME 
YDDVVALLEE SLECQIPRDH TMVNELKVRE RKGKQWIDSV ERLLASSQIT INDISALIEA 
RRHVPISIDI LRKLESLRKS AISWQTSARN VFATNGSSVA ASRLCKNVVA ASKPLSNVVI 
PEIRQLQAEL EHHALWREEA SKVLGVPVAR LASTIDYIRS AFENSLAPDD DAHNNQRVCF 
CRSSPADNMV MCKVCQHSYH PRCVDVSLRH VPEEFKCAMC QRLPNDDGPS LDAFIGLISP 
QRWNFLINPL EFELAQYIAS AAIRYAPQAF RLADPLSLSP PCRDLELLRH TIRKIYTLPL 
VFDARNSQTN ERCVFVNWLF RRMQDAIRMK AKEISLSTVG VQSKVGRRPS VALAAGQSTL 
MNSENGTLSG RARPRRRARI ILAESHPHEF YCLCGMSSAG ENTTAQIECP KCGQGYHAGC 
VKMTEGLAGK SVWTCPCCTV RDGRHYQKGV EVRVQLSSHR GTDQFLDYHT IINDFADRLV 
VITKPTSASA ITLECIDFVP ARIPNNVKTM EEREDSLNRI KKRKSGGVDG GFRNEQATNN 
PVAHGLKTVA AKGFMGPPST ILNKIPTQTA SSEFGGSSVA MGALPDTQTK SSAVPRTIYT 
PAESNANTSV SLLTPTIQNR STFDLRSDFG LESCFSSTPV ATGASTTSIV RQNGCTASAT 
TICCEGRATA VTGKSVLDDN IDSREGSEER YSYSDMGEFT AVKEGRHVVD EDVTMENQ