| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND05790 |
|---|
| Symbol | |
|---|
| ID | 3257183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006686 |
|---|
| Strand | - |
|---|
| Start bp | 1571220 |
|---|
| End bp | 1573973 |
|---|
| Gene Length | 2754 bp |
|---|
| Protein Length | 644 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | 638256517 |
|---|
| Product | STE20 |
|---|
| Protein accession | XP_570118 |
|---|
| Protein GI | 58265924 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTACAT ACTACAAACG AAAGTAACAG CACGACTACC GACAGCGTTC ATTTTTTGTC
AGTCTTCGAC GCACTTGACG TGTGAAAACT TCAGCTTGTA GGTGAAGCGC TTCCTGATCG
TTCAAGTAAT CTCACTACAT GCGAAGCTGC GGAACTGATT AAACCTTTAG CTGCATGCGT
AGCGACCCTT TGCGACATGG CTTTCAGTCC TTCTCTTACT CCTTCTCGAC CAGCACCGGT
GCCGCCTAGA CGAGCTGCAG TCACAGCACC TTCTATACTT AGAGTTACCG ACGGAGCAGC
AGCCCCGCAA TCCAATTTCT CCTCGACCTC CTACTCTCCG TCATTTTCGT ATACCAATTC
ATCGATACAG TCGACAAAGC TTGTGGATAC GACGCGCAGC AGGACGATTC GATCTGGTGC
AGCTAGCATA AAGGAAGAAG GGCTGAGAGC ATTCATGTGG AGTAAGAGGT GGCTAGTCCT
AGGGTCTGCT GAACTTCGTA TCTACAAAAA TGAGGTAAGA ATCCATGCGT GTTAATCACC
ATTTCGTCCA AATGAAACGT AGGGGAATGT TGTTATGAAG CTGATATCGG AGCCGCAGAA
TTCTCCTTCA CCCGTTTACA CCGTGTCTCT GGAGGACATA CAAGATGTCC AACGAGTAGA
TATGAAGCCC TACTGTGTGG AAATTGAAAC TGGCGACAAA TTGCTTTACT TCGCTTTTCG
CTCAGATAAT GAGGTTTATG GGTGGATGGA CGACATTTAC AGCAGATCTC CGCGTTTGGG
CGTATCCCAA CCTACGAACT TCGTTCATCA GGTTCATGTT GGTTTCGACC CTAAGTCAGG
GGGATTCACT GTAAGCCGCC CAAACGAATG ATCCATCGTT CTAATGCTCT AATGCTCTCT
CACGCAGGGT CTACCGCCTC AGTGGTCAAA ACTTCTCACT TCATCTGCTA TCACCAAAGA
GGAAGCTGCC CGCAATCCAG AAGCTGTACT AGATGTTCTT CAATTTTACA CCCAACAGCA
AGCTGGCAAT GTTCTCGAAG GATACCAACA GTTTCCTGTG CCAACTGTTT CAAATCAGTC
GTTGACAACT GGTACTGCCG CTACGCGTTT CAAAGGCGTA GGTTTGGGTG GACAACAGCA
ACAGCAGCAA CAGCTTCAAT CAGTGCCATT CACGGCACCG GAGTCGTTAG AAGCGACCAC
TGTCGTGCCT GTTCGGCCAT CGTTTGATAC TGAAGAAAAT GTAATACATC ATCTGAGACT
ACGTATTGAA ACTGACTTGT CTAGTAGACC TTGGCCCAGA AAGAGAAAGA AAAAATACTT
AATTCACAGC ACCAGCCTAT GGAGTCCGTC TCACGGCCTG CAATGGCTAA ATCTGATAAG
GAGAAGGTTA CGTGGAGTCC TGGCCCGACT ATGGAGAAAA GAATCAGTAC CATGAACGAA
GTACAAATTA TGGAAAAGCT GCGATCCGTT GTAAGTGCCA AGGACCCATC TCAGCTGTAT
TCGAAAATAA GGAAGATTGG CCAAGGGTGA GTGACCGCTG TGTCCCCTGA AGGAGCCGGT
TTGACCAAAC TTTTCAGGGC ATCAGGAATG GTTTTCGTTG CCAAAACGCT GCTGAATGGC
AAGAAGGTTG CTATTAAACA GATGGATTTA TCTCAGCAGC CACGCAAAGA GCTGATCGTA
AATGAGATCA TTGTTATGCG GGAATCCCAA CATCCAAACG TTGTTAACTT TCTTGATGCG
TTCCTCGTAC GAGGTTCAGA GCTTTGGGTT GTCATGGAGT ATATGGAAGG AGGGGCACTC
ACAGACGTCA TCGAGAATAA TAAATTGGAA GAAAATCAGA TTGCAGCGAT ATGCCTTGAA
GTCAGTTCAT CAAGATCAGT GACGGGGGTG GTGACTGACT GTGATGACCC TTCACTTTCT
AGACCTGTCG CGGTTTACAA CACTTACACT CTAGGTCCAT CATTCATCGT GACATCAAGT
CTGACAACCT TTTGATGAAT ACCCAAGGTG AAGTCAAGAT AAGTTAGTTA CCTTTACGTT
CTGCAGCCCG GTTGCCCAAG CTGATATTGA CGTCCCGTAG CCGATTTCGG CTTCTGCGCC
AAACTTACGG ACCAGAAGTC TAAGCGTGCT ACTATGGTCG GAACGCCGTA CTGGATGGCC
CCTGAAGTTG TCAAGCAAAA GGAGTATGGT GCCAAGGTAG ACATTTGGTC TTTGGGGATC
ATGGCTATAG AAATGATCGA AAACGAGCCT CCTTACCTCG ATGAAGAGCC CCTTAAAGCT
CTTTACCTGA TAGCCACAAA TGGCACTCCT ACCTTGAAGT CACCCGAGAA ACTTAGCCAG
GATCTCAAAC ACTTCTTGAG CGTATGCCTT TGTGTAGATG TCGCGTTCCG GGCAACATCT
ACTGAGCTTT TAAAGGTGAG ATAATTTTTA TTTCTGAGAT ATATTCCGTT TGCAATAGCC
CTGATTGTGT TTAAGCACGA GTTCTTGCAG TTAGCATGCT CTGTTCGAGA TCTTGCCCCT
TTACTGCGGT TCAAGCAAGG CACTGTGAGT TTTATTTATT CTGTATCAAA TATGTATCAA
AAGTGCTATT CGCTTATTAT GAAGCAGCTG TAGATATGTA GTTGTCCTAG TCGCCGGTCA
TTCAGCTGTG TATATGTTAA TGATGCTTGG CTTTTCTCGA CTGCGTATAG GTGTTTTGTG
ATAATCGTGC CTGCTATCTT TCAAAGTCTA TCTAGTGCCA TCTGTTTCAT CGCT
|
|---|
| Protein sequence | MAFSPSLTPS RPAPVPPRRA AVTAPSILRV TDGAAAPQSN FSSTSYSPSF SYTNSSIQST
KLVDTTRSRT IRSGAASIKE EGLRAFMWSK RWLVLGSAEL RIYKNENSPS PVYTVSLEDI
QDVQRVDMKP YCVEIETGDK LLYFAFRSDN EVYGWMDDIY SRSPRLGVSQ PTNFVHQVHV
GFDPKSGGFT GLPPQWSKLL TSSAITKEEA ARNPEAVLDV LQFYTQQQAG NVLEGYQQFP
VPTVSNQSLT TGTAATRFKG VGLGGQQQQQ QQLQSVPFTA PESLEATTVV PVRPSFDTEE
NTLAQKEKEK ILNSQHQPME SVSRPAMAKS DKEKVTWSPG PTMEKRISTM NEVQIMEKLR
SVVSAKDPSQ LYSKIRKIGQ GASGMVFVAK TLLNGKKVAI KQMDLSQQPR KELIVNEIIV
MRESQHPNVV NFLDAFLVRG SELWVVMEYM EGGALTDVIE NNKLEENQIA AICLETCRGL
QHLHSRSIIH RDIKSDNLLM NTQGEVKITD FGFCAKLTDQ KSKRATMVGT PYWMAPEVVK
QKEYGAKVDI WSLGIMAIEM IENEPPYLDE EPLKALYLIA TNGTPTLKSP EKLSQDLKHF
LSVCLCVDVA FRATSTELLK HEFLQLACSV RDLAPLLRFK QGTL
|
|---|
| |