Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND05740 |
Symbol | |
ID | 3257438 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | - |
Start bp | 1548325 |
End bp | 1551063 |
Gene Length | 2739 bp |
Protein Length | 753 aa |
Translation table | |
GC content | 47% |
IMG OID | 638256512 |
Product | conserved hypothetical protein |
Protein accession | XP_570498 |
Protein GI | 58266684 |
COG category | [R] General function prediction only |
COG ID | [COG5354] Uncharacterized protein, contains Trp-Asp (WD) repeat |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.436548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CTCTCTTTCA TCTTCTACTT CGCTTCACTA TCCAGCTTCC AAGATGTCCG CCGCCGACCT AGACTATTTT TCAGAAGATG AGCAGCGTGA GATTGAAGCT GAGCTCGACA CTGGCTTCAA GGACATTGAG GAAAAGTGCG TGATCTCCAT CAAATGATTG CGACCTTTTG TGACCATGGA TTTGACTGAT TCACCACCAT TTTAGGTATG CTGTGACCGC CCAGAAGGGC TTTGAGACGA TGTTGGTCGT CGACAACATT CCTATCGTAG ACGGTAGTAA GAAGCAGAGA CTGTTGGAGC GATTGAGACA GACATTCGCC AAAGTGGGCG CGCCCATCGA GGAGGAAAGT ATAGACATGC CTTGGAACGC AGCAGCTGGT ACTAACAAAG GGTACCGGAT CGTCAATTCC TGTTTCATTA TATATGTTGA CTTCTCTTTT CCAATAGTTT CGTTTTCCTG ACATACCCCG ATGTGAAGGA AGCGGAAAAT GCCGTCCACA CTCTCGACGG TGTATCCTTT GGTAAAAACG TGCTGCACGT AAATCGATTT GGAGACATTC AACGCTTCGC CAGTATGCCT GTTGGAGAGG GCGATCTGCC ATCGGGCTGG AAAGAAAAGG AGTATATTGA GAAGGTGAAG TTTGGTAACT GTCTTATGCT GTCGGAAGCG ACTAACATTT TATCAGGATT ACTTGCGAAA TTGGCTTGGG GATATTGCTG GGAGAGACCA GTATGTAACC TTCTGGGAAA CAGAGGTTAC TGTCTGGTGG AACGGACGCA ATGGAACCGC CGAGGCATTA AAGGGGCCCG ACGGTAAACC TGTGAAGAAC AGTGTGGGTC TGATTTGTAT CTGTTAATCA TCAGTTTGGT TGTCATGATG TTGACAGCTT AAATTTAGAA ATGGGGTGAG TTGTACCTAC AGTGGTCCAC CATGGGAACC TACTTGGCTT CGCTTCATCG TGTTGGCGTT GCCCTATGGT CCGGTCCCAA ACTCGATGGA CCCATTGGCG TCAATGTGCT CAGATTCACT CACCCCAATG TTCGGCTTAT CCAATTTTCC CCCTGCGAGA ATTATCTCGT TACCTGGTCA GAAGATCCTC TTCCAAATTA TGAGAATCAT CCCAATGCAG CTCTGCGAGA CACTTTCGGT CCTGAAGACG AAGGAAACCA GTATGTCATT TGGGACATCA AGACGACACG TGTTCTTCGG ACATTCCCTG GTGATAAATC TGCAATTGGG GTAGATGATA CTCAATCCCG CATGTCGTGG CCAACCTTCA AGTGGTCTGC GGATGACTCG TATATCGCTA AGTGCAATGT CGGCGCGGGG ATTTCAGTGT ATGAACTGCC CACTATGGGA TTGTTGGATA GAAAGAGTAT CAAAATCGAG GGGGTACAAG ACTTTGAATG GTGTCCTATG AGCCAGAAGG ATTTGATAGC GAGACAAGAA GGAAAGGGAA AGGAGTGTGT TCTAGCCTTC TGGACCCCTG AAGCTCAGAA TCAGCCCGCT AGAGTGAACA TAATGGCTGT ACCAAGCCGG ACGATCTTGA GATCAAAGAA CCTGTTTAAT GTCTCTGAAG TACGTGTCAT TATTAGCGTG ATATCAACTT GCTGATTTTT CTCTATCCCA GTGTAAATTC TATTGGCAGA GTCAAGGTGA TTTCCTTTGT GTAAAGGTTG ATCGCCATGC TCGAAAGGCC AAATCCAAAA AGGCAACTTC GTGCAATTTA GAAATTTTCC GCATGCGCGA GAAAGATTAC CCTGTGGAGG TTCTTGAATT TAAAGGCATG TTCATCCAGT TAGAGCTTGT TAATTGAGGC AGCTGACCTC TGTCTCCAGA TTACGTTCCG CAATTTGCAT GGGAGCCTTC GGGCACTCGC TTTGCCATCG TTCTCCAAGC AGAAACAAAT CTTCCATCGG TCTCAGGGGC GTCGACCAAG TACAGCATCG ATTTCTATCA GCTTGATTCC AAGAAGGGAG ATTTCATCGC AATTAAACAT CTTGACAGCA AAATGGCCAA TACTCTCGTC TGGTCACCCA AGGGTCGTCA TATCGCATTG GCCACCATAG GATCGTCCAG CAAGTATGAT ATCGAATTCT GGGACCTTGA CTTCACTATC GACGAAAGGC GAGAGGCTGC TGAGCTTGGG GCTAACGTAA CTATGTTGGG CACTGGGGAA CATTACGGCA TCACAGAGAT TGCTTGGGAT CCTAGTGGAC GGTACATTGC GACTTCTGCA TCTACATGGC GACAGTCCGT GAGTGATAAT TGTTGCTGTC AGGATTATTA ATCTAATATA CTTTACAGCC TGAGCCTGGC TTTTCTATTT GGGATTTCAA AGGTCAACAA CTTCTGCACG AATCACGGGA TCGTTTCAAG CAGTTCCTTT GGCGGCCTCG TCCTCCTACG CTGCTTAGTA AGGATCAGAT TAAGAAGGTC AGAAAGGAAC TTCGAGAATA TTCGCGACAG TTTGATGAAG AAGATGCTGC GGAGGAGAAC CGAGGGAGTG CCGAGAAGCT CGCCCAGCGT CGCAGAGAGA TCGGCGAGTG GAATGCTTGG AGGACTAGGA ACAACGACAG GCTGGCTTTT GAACGCGAGA ACAGAGGCAA GTCAAAGGCA AAGATCGATG TTAAAGGGCA GGAGGCACGG GTTGAGGAGT GGGTCGAAGA ACTTATCGAT GAGACTGAGG AATTGTCGAT GTAACTTCAG TGGTCTCGTA TGATGCATCT TTTTTGTAA
|
Protein sequence | MSAADLDYFS EDEQREIEAE LDTGFKDIEE KYAVTAQKGF ETMLVVDNIP IVDGSKKQRL LERLRQTFAK VGAPIEEESI DMPWNAAAGT NKGFVFLTYP DVKEAENAVH TLDGVSFGKN VLHVNRFGDI QRFASMPVGE GDLPSGWKEK EYIEKDYLRN WLGDIAGRDQ YVTFWETEVT VWWNGRNGTA EALKGPDGKP VKNSKWGELY LQWSTMGTYL ASLHRVGVAL WSGPKLDGPI GVNVLRFTHP NVRLIQFSPC ENYLVTWSED PLPNYENHPN AALRDTFGPE DEGNQYVIWD IKTTRVLRTF PGDKSAIGVD DTQSRMSWPT FKWSADDSYI AKCNVGAGIS VYELPTMGLL DRKSIKIEGV QDFEWCPMSQ KDLIARQEGK GKECVLAFWT PEAQNQPARV NIMAVPSRTI LRSKNLFNVS ECKFYWQSQG DFLCVKVDRH ARKAKSKKAT SCNLEIFRMR EKDYPVEVLE FKDYVPQFAW EPSGTRFAIV LQAETNLPSV SGASTKYSID FYQLDSKKGD FIAIKHLDSK MANTLVWSPK GRHIALATIG SSSKYDIEFW DLDFTIDERR EAAELGANVT MLGTGEHYGI TEIAWDPSGR YIATSASTWR QSPEPGFSIW DFKGQQLLHE SRDRFKQFLW RPRPPTLLSK DQIKKVRKEL REYSRQFDEE DAAEENRGSA EKLAQRRREI GEWNAWRTRN NDRLAFEREN RGKSKAKIDV KGQEARVEEW VEELIDETEE LSM
|
| |