Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND05730 |
Symbol | |
ID | 3256841 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | + |
Start bp | 1546485 |
End bp | 1548321 |
Gene Length | 1837 bp |
Protein Length | 436 aa |
Translation table | |
GC content | 46% |
IMG OID | 638256511 |
Product | conserved hypothetical protein |
Protein accession | XP_570617 |
Protein GI | 58266922 |
COG category | [R] General function prediction only |
COG ID | [COG5141] PHD zinc finger-containing protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.643071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGAACAGTTG AAAGACGAAA ACGAGGCTCT ACGACAGCAT CGCCGAATAA GCATATCTCA TGCTCGCCAA AATAGGACCC TTGGCGCCCC CTCTCTGGGC AAGATGCGAA TTGGCGACAA ATCTGATATT GAAGATGATG AGACATCTAT CTATTCTCAG CCGTTGGCAG GAACTGGGTC TACAATGGTA TGTGCTACTT GCTCAACCAA GGTAGGGCAA GTTTGGTGGA GGTGCCCGAG AACTGTGCCC GGAATAGCCA TGTGCGAATC CTGCGGGTAT GTCGAATTGC CAAGCTTGGG AACCATATTG ACAAATCTGC CTCAAAGATC AAATTACCGC AAATACGGAG TTATATCATT CGCCAGATCT GAAGATAGTA AAAAATCAGA CCGTAAGGAA CACGTCAGCA GAAAAGGAAA GGTTCGGACA CCCAGTTGTA GAAAAGATTG TAAGCTCAAA TGTGACTGCA TTTTAGGATG AATCTAGTCA CCAAACCGCT GGCTCTCTTT GGAGCTCCAA ACTCAGTCAA TGTGCCTGTT GCCGCCGAGC TGAGCCGAAC TCACAACTTT TTCGGTGCAG GAACTGTTCC TTTATCGCAC ATACAGGTGA GCTATTGTTT AGTGGTACAA TATACATCGA CTTACTAAGA TGCATAATTC ATTAGGCTGC TATGGCATAG CATCTTTAGA TCAGAAATCA GATTGGGAAT GTGAACTGTG TTCAAACGAG AAAACAGAGG AATGCCGTGT AGTATGTTCA ATATCATCTG ATTCGCATCA CCTTTCAAGC TGAACGCGAC TGTAGGAGCC GCGCTGTGTC CTTTGCCCTC GTACTCCGCA CCTTACATCG AAAAAAAAAA TAAAAAATGT CACCGAGTAC GATTTACTTG CGGCACTAAA GCCTTCAGAA GGCCGCCATT GGGCACACCT ACTCTGTTCG ACATGGACAA ATGACGTGAA ATATGCAAAT GCCACTTTAT TTAAGCAGGT AGAGGGGATA ATGAGCATTG GACGTAACCG GTGGATGGCC GCATGTTCGT TGTGCGGCCA AAGCGATGGA GCAGTCATCA ACTGTAGCGA ATGCGATGTA GAATTCCATG CGTCCTGTGC ATGGCAATCC GGTTTGACGT TGGGGTTTGA ATTCAACCTT GTAAGCTCTT TATTAAGTAT TTCACGGCAC GGTTGATTGA TCCATAACTC AGGCGAAACC GGGAAAGTCG CACAACGAGA TTGTTGTCAA ATTTAAAGAC AGCGAAGGTG TTATGAGCGC AGGAGTGTGG TGCAAATCGC ATGACCTCAG CGGACGCGTT ATTCATGAGA TCTTTGATGT CGAGCCAGAT GGTGGTGAAG TGCGTGGGAA CAGTATTTAA AGATTTCACT GATGTAAGCA TCTACTAACA AGATGTTTTC AGACTGCGTT CCAAGTGTAC ATCGGCGCCT ACAAATCTCC GACTTGGAAC TCTGCGTTCC CGCTGTTGCG CAAGGCTAAG CGATTGGAGC TCATCACGCC ATCATCGTTG AAGTTAGAAG AAACAGAAAC AAACGTAGAA AAGTGCGATC TTTGCGGAGT ATCTGATAGC CCAATGTGGC ATAAAGACAA CGACGGAACC GTACAATCCG ATGCGGCATC CGCTAAAGAA CTTCCAAGAG ATATGGGAAT AGTCCCCAAG ACTGCGAAGG ATGGACAAGG ACGAGAACAA CAATTGCGAC TGCTCTGCCA TTTATGTTGG TTTAAGAACC AAAATTAGCC CCAAGTACAT CGTATTTCTT ATTGATTGAT GAATAGGCGG TAGTAATGCA CAAGCACTAA CAGATAGCAG ATTCAGGGAT AGACAAT
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Protein sequence | MRIGDKSDIE DDETSIYSQP LAGTGSTMVC ATCSTKVGQV WWRCPRTVPG IAMCESCGSN YRKYGVISFA RSEDSKKSDR KEHVSRKGKD ESSHQTAGSL WSSKLSQCAC CRRAEPNSQL FRCRNCSFIA HTGCYGIASL DQKSDWECEL CSNEKTEECR VEPRCVLCPR TPHLTSKKKI KNVTEYDLLA ALKPSEGRHW AHLLCSTWTN DVKYANATLF KQVEGIMSIG RNRWMAACSL CGQSDGAVIN CSECDVEFHA SCAWQSGLTL GFEFNLAKPG KSHNEIVVKF KDSEGVMSAG VWCKSHDLSG RVIHEIFDVE PDGGETAFQV YIGAYKSPTW NSAFPLLRKA KRLELITPSS LKLEETETNV EKCDLCGVSD SPMWHKDNDG TVQSDAASAK ELPRDMGIVP KTAKDGQGRE QQLRLLCHLC WFKNQN
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