Gene CND05530 details

Gene Information

• Locus tag: CND05530
• ID: 3257287
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006686
• Strand: -
• Start bp: 1497275
• End bp: 1499316
• Gene Length: 2042 bp
• Protein Length: 511 aa
• GC content: 50%
• IMG OID: 638256491
• Product: RNA processing-related protein, putative
• Protein accession: XP_570547
• Protein GI: 58266782
• COG category: [R] General function prediction only
• COG ID: [COG2319] FOG: WD40 repeat

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.104569
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTCCGGCACA CCGCGATGGA CTTGGACGAC CTCAGTAAGT ACAGCCCACA CGGCCACAGC 
TCACCCCGCG CAGTCACAGA CAACACCTAC CAGCTCGGCG GCATCGACGA CGAGCGGGAA 
AGAGCACAGA ATGCCGCCAT CATAGAAGAG CTCGAACGCA AGAAGAGGTT GCGCAAGCTT 
GCCGTCCCCA CAGACGACAA GAAGGTCAGG GAGAGGCTCA GGGCGTATGG AGAGCCGATC 
ACGCTCTTTG GTGAAGGAGT AAGCAGTCAA TCTATCGGAC AGCGTATCCA AAAGACAAAC 
ACTGACGAAT ATGGAAACAG CCTGGAGACA GACGAGACCG ATTAAAGTAT GTACAGGAGC 
AAATCGAGCA GGCGAAAGGG GAGGGCGGAA TGGTCATAGA CGAATCGGAG GAGAGCAGCG 
ACGAAGATGA AGAGGTGAGT TGTGAAACCT TTGCCACAGC GCTACACGAG CCAGCCAACT 
CATTTCTGAT ACCTAGGGAG AATTCTATAC TGAAGGCGCA GACGATTTAC TCGAAGCTCG 
TCGAAAGATT GCAAGGTATT CTTTATCAAA GGCCAGAGCA CGAATAGCTC GTCAGAGAAG 
AGAATACAGC GTTCCCCTGG GAAAACTCGT TAATGCTCGA AAGGAATTAT TCAAAGAGCT 
CAAAGTACGT TTTGCCACTT TTTCTGCAGC ATGACAAACG CTGATCGATC CTCGCACCTT 
GCGACAGTCA TTCAACAACT TTGGCTCCCA ATTTGGAGAT GACCGTCCCT TATCCACCAT 
CCGTTTTTCA CCATCCTCCC AATATGTCCT CACGACCTCT TGGACCGGCG ACACGAAGCT 
TTGGGATCTA CCGAACCTCA ATCCCATCTC TACAAAAAGG GGACACACGG AAAAGGTCGG 
AGGAGCCGCT TGGCATCCGT TTGCGACAGT AGGAGCCAGT GAAGAAGCTG TCAACTTTGC 
GACTGGAGGA GGCGAAGGCG ATGTAAAGCT TTGGTCTTTG TCCGGGTACG TATTTTCTTT 
TTCCTCAATC CATCCCGTCT TGTCTTTTTT TCTAACCCTG CCGTGTAGTG AAAAACCTCT 
ATCGACCCTT TCAGGTCACA CATCGCGAGT TGGTCGACTC GCTTTTCATC CTTCTGGAGC 
CTACCTCGCT TCCGCAGGTT TTGACGGTAC ATGGCGTCTC TGGGACGTCG AGTCGAGTAA 
AGAGTTGATG ATACAAGAGG GTCATAGTAA AGAGGTCTAC GCTTTGGGTT GTCAGGATGA 
TGGGGCATTG ATTGCTTCTG GGTCAGTTTC ATTTCCTCGG ATTAGAGGCT TGAATTACAA 
GAAAGGTTGG ATGACTGACA ACAAATGTAC ATTATAGAGG ATTCGATGCC ATTGGTAGGG 
TATGGGACTT GAGAACTGGA CGAACTGCTA TGGTCTTGGA TGGCCATGTC AAAGAAATAC 
TTGCTATGGA CTTTGCTCCC AATGGGTAAG CTCTTGTTTG CTCAACACCC CCCCTTCCTT 
CTCGCTCATA GCTGATAATG CGTGTTCTGC TTTGATAGGT ACCAAATAGC AACAGGATCA 
GGTGACGATA CCGTCCGTAT CTGGGATCTG CGTGCACTCA AGACCCAATA CATCATCCCC 
GCGCACAAGT CTAGTGTGGC CGACGTCAAA TTCTTTAGAT CTTCCGGTGA AATGCCACCG 
GTCGGCATTC AGGGATTGCC GCTCTCGTCC CGCTCGGCAA ACGTTGATGG TATGGACGTG 
GATAAGAGCA ACGATACAGA AGACAATGAA AAGGAAGAAA AGCTGAGTCG TTCCGGCATG 
TTCCTCGTCA CAGCCGGATT TGACTGCAAT GTCCGTATCT GGTCTGCAGA CGAATGGAAT 
ATGGTGCGCA ACTTGTCGAC GGATGCGGGT AAGGTGATGA GTGTGGATGT CTCGGGAGAT 
GGGAAATTTG TGGCGAGTGC AAGCTATAGT CGATCGTTCC ATCTGTTTGG GGGAGAGAAC 
TCTTTGTAGG CATGTACACT TGCTGGAAAG GGAGCAGACC ACAGATGGAA ACAGAAGAGA 
CG 

 

Protein sequence

MDLDDLITDN TYQLGGIDDE RERAQNAAII EELERKKRLR KLAVPTDDKK VRERLRAYGE 
PITLFGEGPG DRRDRLKYVQ EQIEQAKGEG GMVIDESEES SDEDEEGEFY TEGADDLLEA 
RRKIARYSLS KARARIARQR REYSVPLGKL VNARKELFKE LKSFNNFGSQ FGDDRPLSTI 
RFSPSSQYVL TTSWTGDTKL WDLPNLNPIS TKRGHTEKVG GAAWHPFATV GASEEAVNFA 
TGGGEGDVKL WSLSGEKPLS TLSGHTSRVG RLAFHPSGAY LASAGFDGTW RLWDVESSKE 
LMIQEGHSKE VYALGCQDDG ALIASGGFDA IGRVWDLRTG RTAMVLDGHV KEILAMDFAP 
NGYQIATGSG DDTVRIWDLR ALKTQYIIPA HKSSVADVKF FRSSGEMPPV GIQGLPLSSR 
SANVDGMDVD KSNDTEDNEK EEKLSRSGMF LVTAGFDCNV RIWSADEWNM VRNLSTDAGK 
VMSVDVSGDG KFVASASYSR SFHLFGGENS L