Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND05450 |
Symbol | |
ID | 3257080 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | + |
Start bp | 1480837 |
End bp | 1482766 |
Gene Length | 1930 bp |
Protein Length | 523 aa |
Translation table | |
GC content | 50% |
IMG OID | 638256484 |
Product | conserved hypothetical protein |
Protein accession | XP_570541 |
Protein GI | 58266770 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.723357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACTC AACTCCCCCC GCCAAAACGG CAGAAGTCGG CCTATTCGCA GTCCCAAATG CCCAAGGTCG AAGAACCGGC GAAAGACGTC CCCTCAATTG TGGTCCAGTT CAAATCGGCA GAAGATGGAT CCAGTCTTGG TCCTGCGATT AACTTGCCTG CTGATACCGC CAGGGATGCT TTACAGATGC TTGTAAACAA ACTTAGGGGA GAGGTCAGTG TCCGATTCAT TCGTTGCACA GCCGCTGACT CTAACACAGG ATGAGGATCC TCTGCCGTAC GCTTTTCATC TCGTTCCTAA AGAACCTTCA ACTTCAACGA CTCCGGCATC TGCTCGAGTG CAAATCAATA ACTCTATTCA ATCCGATGCT CTTGAAGCTA AAAAAAGTAC TTTCTCTCCG GAAGACGTGT TTGAACTATG GTGTGAGCCG CAAGCGGTTT TTAGGGTTAG AAGTGTTGGG AGGTGCAGTG CTACATTGAC TGGTGCGCGA GCTCTCTGCA TCTATATAGT ACTGAAACTG ACAGCCACTG CAGGCCATTC ATCGCCAATC CTTTGCTGTG CTCAGTCTCC TACTGGTCGG TATGCTGCCA CAGGTTCGGG GGACGCCAAC TGTCGAGTGT GGGACATGGA GACTGAGACC CCCAAGTGGA CTCTCTCGGG CCACAAGGGT TGGGTTCTGT GTGTGGAATG GGATTCTCGG GAGAAGATCC TTGCTACAGG TGGACATGAC GGACAAGTCA GGCTCTGGAA TCCAGCCACC GGCCAACCTT ATGGTGCGCC CCTTTTGGGC CATACCAAAT GGGTTACTGC GCTGGCTTTC GAGCCTCTCC ATCTCGTCCC TAAGAGCTCA TCTGGGCCAC GTATTGCATC TGCTTCAAAA GATGGCACTG TTCGAGTTTG GAATACGTCT ACCAGAAAGT TGGAGTTTGT ACTTACCGGC CATGCCGCTA GTGTCAACTG CTTAAGATGG GGAGGTGAAA ATGTCATATA CACAGGAAGC AGTGACAGAA CTGTCAAGGT TTGGAGCGGC GTTGATGTGA GCCATCACTT ATTGTAGACA TAAAGAAACA AGGAACTGAC AGAATTACAG GGCAAGCTTA TTAGGACACT CTCAGAACAT GCCCATTGGG TTAATACTAT GGCACTCAGC ACAGATTTTG TCCTGAGGAC TGGTCCATTC GATCACACTG GCAAGACCCC TACCAATGAC GAAGAAGGTA GGCACAACCT GATAGTTTCA CTTGCTTCGT CTGCTGACAT CTTCGATAGT CAAGAAACGG GCGGAGGAGC GGTACAAATC CGTTATCACC AACCAGCCCG AGACTCTCAT TACTGGTTCT GACGACCACA CCCTTTACCT TTGGCCTGAC CAGGCTTCCT CGTCCTTCTC ATCCACTTCC ACACCCAAGA AACCTCTCGC TCGGCTGACA GGTCATCAAA AACAAGTTAA TCATGTTGCA TTCTCTCCTG ACGGCCGAAT GATTGCCAGT GCAGGTTTTG ATAATGCCGT CAAACTTTGG GAAGGAAGGA CAGGGAAGTT TATTGCAAGT CTTAGAGGAC ATGTGGCAGC GGTATACAGG GTTGCTTGGT CGGCGGACTC GAGGATGTTG GTTAGTGCAA GCAAGGACAC AACGCTCAAA GTAAGAAAGT TTAATTCGTA CGTAGTAAGA ATCTACTAAT CCACCGTGGT AGTTGTGGAA CCTCAAAACT TACAAGATCC GCGTCGACCT TCCCGGCCAT ACTGACGAAG TGTACTGTGT GGACTTTGTT GCAGACAAGG TCGTCAGTGG TGGCAGAGAT AAGACCGTGA AGATGTTAGT TCGCCAGTAG ACGTCGGATT GCCTTTCTCA ATGCTGACCC TTGTTCGTAG TTGGAGGAAT TAAAACTCGA TGAAGAACGA CCCACAGATC GCAGACTGAA ACCCTGGCAT
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Protein sequence | MATQLPPPKR QKSAYSQSQM PKVEEPAKDV PSIVVQFKSA EDGSSLGPAI NLPADTARDA LQMLVNKLRG EDEDPLPYAF HLVPKEPSTS TTPASARVQI NNSIQSDALE AKKSTFSPED VFELWCEPQA VFRVRSVGRC SATLTGHSSP ILCCAQSPTG RYAATGSGDA NCRVWDMETE TPKWTLSGHK GWVLCVEWDS REKILATGGH DGQVRLWNPA TGQPYGAPLL GHTKWVTALA FEPLHLVPKS SSGPRIASAS KDGTVRVWNT STRKLEFVLT GHAASVNCLR WGGENVIYTG SSDRTVKVWS GVDGKLIRTL SEHAHWVNTM ALSTDFVLRT GPFDHTGKTP TNDEEVKKRA EERYKSVITN QPETLITGSD DHTLYLWPDQ ASSSFSSTST PKKPLARLTG HQKQVNHVAF SPDGRMIASA GFDNAVKLWE GRTGKFIASL RGHVAAVYRV AWSADSRMLV SASKDTTLKL WNLKTYKIRV DLPGHTDEVY CVDFVADKVV SGGRDKTVKI WRN
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