| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND05200 |
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| Symbol | |
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| ID | 3257449 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006686 |
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| Strand | - |
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| Start bp | 1417144 |
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| End bp | 1422318 |
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| Gene Length | 5175 bp |
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| Protein Length | 1538 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | 638256456 |
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| Product | guanine nucleotide exchange factor, putative |
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| Protein accession | XP_570057 |
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| Protein GI | 58265802 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5307] SEC7 domain proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGCTG CTCCCCCCCG GCCGTCGACT TCCTCCTCTC GCTCTCTCCG CAGGACTCCC
GCCGACTTTG AGGCTGCGCT CCGCAACCCA CAGGAGACAC TCTATCTCTC GGCAGGCCCA
CCACCCATCG GCGAAGACCT CGAGTCCGAA GCTGCATCCA CTGCAACCGG CCACCACCAT
TCCTCCGGCA CGAGCACAGC GGCCATGGAC GACCCAGACG CACCTCTCTC CGTGGACAAA
CGAAGCTTCG AGGACGACCT CCGCGCGCTG AGCAGAACGC GGGAGAGAGA GGAGGGGAGG
ATAGGGCTCG GTGTGGGACA TGTAAGCGAA GGGAGTGTCG TCAAGAGGCC ACCGATACCT
GTCCCGGGGG TGACACCGCC TACGCCAAAA GGACATGCAC GGAAGGCATC CTGTGTGACG
ACGACGAGCA CAACGTCGAC CGGCACCGGG GACACACCGA CAAGGGCGGC CAGGCGGCCG
GTGAAAAGCA TCGGTCTTGA CGGTGGGTTC TGCTGGAGTC CTCTCTCGTG GCCGCATACG
CTGATAGAAT ACCCCAGCCG AGCTTGGGAT TGAGCCCAAA AGCAAAAAAG CGCCCCCAAA
ACGGCGCTCT CTCTTCAGCA AGGCTACCAC GACCTCCCAG CCCGACCTGG CATCCATGGT
CCGGCGCTCA ACCCACCGCA GTAGCAAGCA GAAACAAGAC ACAGCGTCCA CTCCTGCACC
ATCGATGTCC ACCTCCGCAA GCTCACGCAC GCTCTACAAG GAGCAGCCAT CCCCATCTGC
ACCGAGGAAT AGGTCCACAA CAGAAACCAG CGACAAGCAC GGCAGCATGA TGGGAGGTAA
CCAGATGGCC ACCATTGCGG AAGGGTCTGG CACGTTGAGC AGAAATAAGT CAAACGCTTC
TGATGAAGGT TTCAAGGTAA GTCTAATCGT ACAGTCGCCA CTCTCGCTTA CACGAGTAGA
CAATGAAGTA CAAGGCCAGG GGTATGTTTG GAAAGATGTT TGGATCTACC AAAGAAGATG
TATGTATCTT GTCTGTCTGC ACCTTGGGGG CCATCTAATA ACCCAACGCA GCAGCAGCTC
TCATCAAAAC ATTCCGGTTC AGCTTCTTCC TCCCGCGTAG ATATCAATGC CGAGACTGTT
TACCCGCCTG TACCTCCTGT CCCAGCTACC TATGCCAATC AGAAACAGCG ACCTTTCACC
CCCTCTTCAA CATCCACCGA CGTCTTCAGC CCTTCCAGAT CTCCTCAGTT ATCCACTTAC
TCGGCATCTG CATCGCCTGC CATGGCCTCG CATAACAGGA AATCAAGGAC CCCGACGCCA
TCAACCATGT CTGGGCGGCG CGACTCGCAG GCTAGTGCCA TGATCACGGA CAAGCCTTTG
CCTGCTGTCA GAGACAACGT CGACGACCAT GACTCGACAC TCGTGGCAAC AATTACTAAA
CGAGGATCCA GTCCCCTTCA TGTTAGAGAA CCAGCCAGCG TATCAGAAAA CGAAACTCCC
TCTCGAGCCA CATCTTGTTC TTCACGCAAA CTCGCCCCTT CACCGTCACC TGCCACCGCA
GCAGTGACAT CTTTTTCTGA CGATATGGCA GGGATGCTTG CCAATATAGG ACAATCGCAA
CCTGCTATGG AGCTTGGCTT ACCACAGGAG AGTTTAAGGC TCAGGGATGG TAAAAACGGG
TTTCCCGCCG CTTTGGGGAG GCCCCTATCA GATCAGGAGT TGTCGGTGAC ACCTACATCA
TCAACATTCT TATCAGCTAC TTCGTCTCCG CAACGGTCGG CGTCAGTATC TGCAGCTTCA
GCATCGGACC AAGCATCGTC AATGCCTCTT AAAGGTTCAT CTGCCGATCA ACTCTCATCC
TTCCTTGACC CTCCTATTTT CCAATCGAGT ACATTCTTGA ATCATGAGCT CTACTCTCTT
CACCCTCAAC AGCCTCAAAA TCGACACCAC ACTGAGCCCT TCATTAACCT CCATGCCCCG
TCTCCATCCC TCTCTTCTGC ACTTGCACCT TCTGTAGACG TCCCTCAAAT TGCACCGATA
TTTGAAAAAG CCAGTGACGA CCAAGGAGAG AAGGACTGGC AATCGTTATC AGAAGGGCCA
TCACCGCTTC TACCGTCTTC CGCCAAGTTT GATTCCTCGG GCGGTGTCGA AAATACTGAT
CGACCGTCAC CCATTGCACC TTCGGCTTGG GCTCGTCAAG CTCAAGGGTC ACCCTCGTCT
CCTCTCCCGT CTCCGGCACG ACTGCAGTCT AATTTATCGG ATAAGATCGA CAGGACGTGT
ATACCTGCTT CGTCTAGCGC CATGTCTGGT TTCAGCTCCC TATCGGCTCA AGGAACGATA
AAGGACACTC GAGATAAAGT GGAGGTGATC TCTTCCCCGC CAGAGACCCC TAGTAAAGCG
CAGGAGCAGG CTGTGGAAGT ATCCGATGAT AAGGCTGAAA GCCAGAAAAA TAGCGAACCA
GACCGTGAAC AAGATAAAAT GGGAGAAGGG AGCAACGAGG ACAAGGGGAA GAGGCTAGCA
CGCGAATTCT ATGAAGGGGA TGGGACGACC GTGGCTGGGG ATAAAATGGC AGAGTTTTTG
GGTGGACCGT GAGGAATTTA TTGACACCTA TCCGTATGGA GCAGCCAGGA CTGACGTTTT
GACTTTGCAG GCATGCTATC AACGACATCA CCTTGAAATA CTTTATGCAG TACTTCCACA
TGGAGGGACA AAACCTCGTT GATGCCTTTC GGTAAGCTTT GAAAATTCCT TCAAAAACAA
AGCATTTTGG GCGGCAACTC ATTTTTTTTT CTCTATGCAG GCAGCTCTGC CAAAAACTCT
ACCTCAAGGC CGAATCCCAA GAACTCGATC GTATCATGGG CGCGTTTTCC GCTCGCTTCT
TCGAGTGCAA TCCCAACACC GTCTTTGGAT CTCCCGGTAT CTTGCATACC GTCTCTGCCG
CGATGCTCAT GCTCAACACC GATCTCCATA TCGCAGAATT GAGTAGACAC ATGTCGAAAG
CTGAATTTGT CAGGAACACA CTCCAGGCTA TTCATGAGAG TACAACTGTC GATCCAAATA
CAATCTTGAG CGCTGCTGCA GATGAAAGGT CTTCGACTCC CGATTTAGTG AGGGATGATG
ATGGAAGCAG CATGAAGCCT AGCCTCGGCT CAAACTCATC CATGTCCACC ACGCTAATCA
ACACAAGAGC CAAGACACCG ATCCAACCGA TGCAAGCTCG GAGCACTTCA GCACCTGTCA
TTTCTGCCCA CATTCATCAG CATGCGCCGC CTTACGCCTC TGCAAACAGC TCGCTATCCG
TAGCTGGCAT ATCTACAGAG GGGAAAAGCA GAAATAGCTC GTTCAGCGCA GGCTCATGGA
GCTACTCCAA GGGCTGGGAA ACAGGAGCTG AAGCTGCACT GAAGGAAATC TACTCTTCCG
TTCGTGCTGA CAAGATCCTT CTTCCTATAT CTGGTATTCC CGGGAACGAC CGAAATGCAT
CTCGTTCGAG CAATCGCCAG TCAATGATTT CACTTGCTAG CAACGGTCCT TACGACTCTC
GGTTCGCCAG GGGACGGACA CCGACAGACC GTATGAATGT ACTCAGACGG GGGAGTATAC
GTAGTGTCCA AGGTCTGTTA AATAACGGCA GTAACAGTCC TTATGGCTCC CAATGGTACG
GGTCTGATGG GAGACTCAGT CCCGCTCTGA GCAACGCAAC ATCTATCAAC GAAACGGGCG
CTAGTGGTTC CGGTTTCTCG TCTTTCGCCC CCTCTCTGGG TTTTGCTTCC AACCTGTCAC
ACACAGTGAT TCGAGAAAAT GAAGACGAAG TTGGTTCGCT ACATTCAAAG GCTAGCGTAG
GCACAGTGGA GGATATGGAT GATGATGAGC TTGCGTTGCT GGGTGCACCA TGGGCCAAGG
AGGGGATTTT ACAACGTAGA ACACAAGGGG AAGGCGTGGC GAAAAGGGTG AAGAAGGCTG
ATTGGAAGCA GTTCTTTGTG GTGGTCAGCA AGGGGGATCT GTACATGTTC ACGTTTGGAG
ATGGTAAAGG AGGAGGGGGA TTTATGGGTG GGTCCGTGGG TGGTGGAAAT TGGCTGGTAA
GTCTTGAACT CTCTGCGCAA GCTAGTATGG GCTGTACTGA TGATGAGTAT TGGCAATCTG
CAGGAAAATG CCAATGCGAA CGGTACTATC AATCTCATGC ACACCACCGC TGTTGCACTT
CCCAAGCAGG GCCACTCGTC TTCAAAACCA TATTGTTTCA GTGTCAACCA GTCATCCGGC
GAAGTGTGCA CCTTTGCAGC GGGGACCGAA GACCTCGTTG CCGAATGGGT CGCGACGTGC
AACTATTGGG CAGCAAGGAA GACTCGACAG CCATTGCAAG GAGGCGTGTC AAATATGGAG
TATGGATGGA ACAGAGTTGC AGTTGATCAA CTGGAGGACG AAAGCGATCG GATGAGTGTC
TTTAGTCAGA AGAGTAACGG GAGCCGAATG GGAGGCACGT ACGGCCGGCG GGCTCTCGGG
AGTGGTGGCG GGAGCAGTAC AGGGCAGTTT GACAAAATCC ATATCAACGA TTGGAAGCCG
CCACCTCCTG CGATGATTCC GAGTACTATG GAAGAGGAGG GTCAATTGGA AGCCTTGGTA
GAGTATGTAA AGTCGCAAGA AAAGGAGTTG GAGAAACACA AAGCTGTTGA GGAGCCGATG
ATGAGATTGG TGAGTTTTGG TTGTTGTGTA GACAATAGCT AAAAGACCGC GCTGATCCTC
ACGACGACAC TAGTATTCTC ATGGATCAAA GAATCTCCAC AAAGCAAAGG AAAATTGGAA
AGCCAAATCG CACTATATCC ATAGTGAAAT ATTCAAATAC GAAACATACA TCGACGCTCT
GCGAAACGCC ATATCACTTC GGGCCAAGAA ACAAGGCGAG AAGAAATTGG AAAAGTCACT
CGCAATGCCG AATAACAACT TGCAGTCTTC CTCTGGAGAT AAATCCGGAG CTTTGGATAA
AACTGAAAAG GCGGTTGATG CAAGCGGCGC GGCGCAAGGT GTAAATGCAG GGGGGTTGTC
GATTGATCCG GAGGTCACAG ATGGACAATT CGACGACGAC GGGGAAGAGC AGCCTATAAC
GCCGAATGCG ACGATCAGGA GATGACATCG GCCGTGAAGA TATAATGGCT TTATAGTGTG
GATTGGTATA TAACG
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| Protein sequence | MEAAPPRPST SSSRSLRRTP ADFEAALRNP QETLYLSAGP PPIGEDLESE AASTATGHHH
SSGTSTAAMD DPDAPLSVDK RSFEDDLRAL SRTREREEGR IGLGVGHVSE GSVVKRPPIP
VPGVTPPTPK GHARKASCVT TTSTTSTGTG DTPTRAARRP VKSIGLDAEL GIEPKSKKAP
PKRRSLFSKA TTTSQPDLAS MVRRSTHRSS KQKQDTASTP APSMSTSASS RTLYKEQPSP
SAPRNRSTTE TSDKHGSMMG GNQMATIAEG SGTLSRNKSN ASDEGFKTMK YKARGMFGKM
FGSTKEDQQL SSKHSGSASS SRVDINAETV YPPVPPVPAT YANQKQRPFT PSSTSTDVFS
PSRSPQLSTY SASASPAMAS HNRKSRTPTP STMSGRRDSQ ASAMITDKPL PAVRDNVDDH
DSTLVATITK RGSSPLHVRE PASVSENETP SRATSCSSRK LAPSPSPATA AVTSFSDDMA
GMLANIGQSQ PAMELGLPQE SLRLRDGKNG FPAALGRPLS DQELSVTPTS STFLSATSSP
QRSASVSAAS ASDQASSMPL KGSSADQLSS FLDPPIFQSS TFLNHELYSL HPQQPQNRHH
TEPFINLHAP SPSLSSALAP SVDVPQIAPI FEKASDDQGE KDWQSLSEGP SPLLPSSAKF
DSSGGVENTD RPSPIAPSAW ARQAQGSPSS PLPSPARLQS NLSDKIDRTC IPASSSAMSG
FSSLSAQGTI KDTRDKVEVI SSPPETPSKA QEQAVEVSDD KAESQKNSEP DREQDKMGEG
SNEDKGKRLA REFYEGDGTT VAGDKMAEFL GGPHAINDIT LKYFMQYFHM EGQNLVDAFR
QLCQKLYLKA ESQELDRIMG AFSARFFECN PNTVFGSPGI LHTVSAAMLM LNTDLHIAEL
SRHMSKAEFV RNTLQAIHES TTVDPNTILS AAADERSSTP DLVRDDDGSS MKPSLGSNSS
MSTTLINTRA KTPIQPMQAR STSAPVISAH IHQHAPPYAS ANSSLSVAGI STEGKSRNSS
FSAGSWSYSK GWETGAEAAL KEIYSSVRAD KILLPISGIP GNDRNASRSS NRQSMISLAS
NGPYDSRPYG SQWYGSDGRL SPALSNATSI NETGASGSGF SSFAPSLGFA SNLSHTVIRE
NEDEVGSLHS KASVGTVEDM DDDELALLGA PWAKEGILQR RTQGEGVAKR VKKADWKQFF
VVVSKGDLYM FTFGDGKGGG GFMGGSVGGG NWLENANANG TINLMHTTAV ALPKQGHSSS
KPYCFSVNQS SGEVCTFAAG TEDLVAEWVA TCNYWAARKT RQPLQGGVSN MEYGWNRVAV
DQLEDESDRM SVFSQKSNGS RMGGTYGRRA LGSGGGSSTG QFDKIHINDW KPPPPAMIPS
TMEEEGQLEA LVEYVKSQEK ELEKHKAVEE PMMRLYSHGS KNLHKAKENW KAKSHYIHSE
IFKYETYIDA LRNAISLRAK KQGEKKLEKS LAMPNNNLQS SSGDKSGALD KTEKAVDASG
AAQGVNAGGL SIDPEVTDGQ FDDDGEEQPI TPNATIRR
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