Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND04950 |
Symbol | |
ID | 3257428 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | - |
Start bp | 1355122 |
End bp | 1356991 |
Gene Length | 1870 bp |
Protein Length | 493 aa |
Translation table | |
GC content | 49% |
IMG OID | 638256431 |
Product | hypothetical protein |
Protein accession | XP_570069 |
Protein GI | 58265826 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.747278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTCAATATTA CCTACAATTG CTCCTCTTCG GCCATGCGAG CAACCATACG TTTTAACCAA GCCGCCGTAC GCCATACAGC AGTTCCACGT ACATCAGCAA CAGCTCCTAC ACCTTACTCA TGGATGGACC CATCTCCGAC TGTCAAAGCG GACGGTATGT CCTGTTTTTT CTTCTTGTCT CTACGATCTG AACCCCTATT AGGCCCACTG TCAGGAATGA CTATTGCCCT TAAAGAGAAT ATATCTTATT CATATGCACC TACCACATGC TCCTCTGTGG CATTAAAAGA TTACAAGCCG CCTTTTGATG CTACATGCGT TTCGAGTCTT GTAGCAGCGG GGGCGCAAAT AGTTGGGATG ACGAAGATGG ATGAGTTTGG TATGGGGTGA GTAATGAGAT GGACTTGAAC AGGTATTGAT TATTCATCAA ATTTACGTCA GCTCGTTGAC TACCAATTTA CCCCCATATT ATTCTCCGGT ATATAACCCG GCTTCACCGT CACCTGAAGA GCCACCTCGG TCAGCCGGCG GAAGTTCAGG CGGATCAGCG GCTGCTGTAG CAGAAGGCAG CTGTTACGCG TGAGCATATA TGTCTTGATA TGTCCTTCAA TCACCGAAAC TAACCTCTCC ATCCCTGAAG AGCTCTCGGG ACAGACACGG GTGGTTCAGT GCGTTTGCCA GCTAGTTATT GTGGTGTGGT CGGCCTTAGA CCGTCATATG GGCTCATCAG CCGGTATGTA TCTCCCTGCC TTTGTTAATC TGACTTCAGG ATTTAACGAT ATGTAGGAGA GGCGTAGTAG CGTACGGCGA CTCTTTAGAT TGCGTTGGTG TACTAGCGAG AGAAGTCGAC GCCGTTGAAC GAGTGTTCAG TGAGTTCTCA TCCTCCTCGT CCACATTCCA TTACTCATGG TTTGCAGACG TCATATCACA TCCAGATGAT AACGATATGA CATGTGCATC TACCCGTTCA CGCTCCCAGG CCCTTTCCAT CCTGAAGGCC CACCTTGCTA TCCTGCCTAC AACAGCTGGC CCTCTATCTG GCTGTCGCAT CGGGGTACCC AGGCAAGCTT CACTACCTCC TCCGTACATA AACACACCTC GTTCTCTCCT CTCACACCTA CAGTCGCTTG GAGCAACTCT TCACCCAGTG TCATTACCAT CTCTTCCTAA AACTTTGCCT GCGTACTATG TCCTCGCAAG TGCCGAAGCG TCTAGCAATC TGGGAAGATA TGGCGGGAGT TGGTTTGCAG GGCAAGCTGA GAAGACAGTG GGAAAGAGAA CGGAAGAGAG TGGGATTCAG AGAAGGATCA GGATCAGAAG CGAAGGGTTT GGGATAGAGG TGAAGAAGAG AATTTTGGCA GGAACCCATG TTTTAAGTGC AGAGTGAGAG CTTTTTTGCC ACTGTCTGAC TAACAATACG ATATTGACTG ATTATCGGCG GCAAGTGAAT TTAACAACAC GTACTTGAAA GCACTGTACA TTCGTCGCTG CCTGAAAAAG GACTTTCAAG CAATTTTCCG GATTCCCCAC CCTTTATCTC CTTCGCCGGC TTTACCTTCA CCGGATGCGG TAGACTTCAT TATTCACCCC ACAGCAATCT GCACAGCACC CAAAATTAAT CCTACCGGGG AAGACAGTGA TCAAACAGAG GCGACCTATA TCCAGGATCT GCTCAACGTT CCCGCCTCAC TTGCAGGCTT GCCCGCCATG TCTGTTCCGG CCGGTAAAGG TCCCGATGGG TGGCCAATAG GTGTCGCCAT CACTGGACAG TGGGGTATGG AAAATCTGGT CTTCAAATTG GGGAAGGTCA TAGAAGAATG GAATAAAACG CAGTCATTAT AGTGTACACA ATGCATTAAA ATACGAAGTC
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Protein sequence | MRATIRFNQA AVRHTAVPRT SATAPTPYSW MDPSPTVKAD GPLSGMTIAL KENISYSYAP TTCSSVALKD YKPPFDATCV SSLVAAGAQI VGMTKMDEFG MGSLTTNLPP YYSPVYNPAS PSPEEPPRSA GGSSGGSAAA VAEGSCYAAL GTDTGGSVRL PASYCGVVGL RPSYGLISRR GVVAYGDSLD CVGVLAREVD AVERVFNVIS HPDDNDMTCA STRSRSQALS ILKAHLAILP TTAGPLSGCR IGVPRQASLP PPYINTPRSL LSHLQSLGAT LHPVSLPSLP KTLPAYYVLA SAEASSNLGR YGGSWFAGQA EKTVGKRTEE SGIQRRIRIR SEGFGIEVKK RILAGTHVLS ADEFNNTYLK ALYIRRCLKK DFQAIFRIPH PLSPSPALPS PDAVDFIIHP TAICTAPKIN PTGEDSDQTE ATYIQDLLNV PASLAGLPAM SVPAGKGPDG WPIGVAITGQ WGMENLVFKL GKVIEEWNKT QSL
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