Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND04910 |
Symbol | |
ID | 3257178 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | - |
Start bp | 1349156 |
End bp | 1351194 |
Gene Length | 2039 bp |
Protein Length | 460 aa |
Translation table | |
GC content | 46% |
IMG OID | 638256427 |
Product | metalloendopeptidase, putative |
Protein accession | XP_570075 |
Protein GI | 58265838 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GGTCCGCAGA CGGCAAAATT GTGAAGATCT TCGACTGGTT ATTATCCTAG ATATCATAGA TCTGGAATTT GTTAGCATCA GGAACTCACT ATGACTCGCT CTCCTGTTGC CCTCCTAGAC GGAGTTATAT CTCACCTCGC CCACCTGGCA GATAATCGTG CGATCGATTA TCGATTTATC GTTGTTCTCT CCACTTGGCT GCAGACGGCA TTTGAGGTGT ATATCCTGTA AGTTTGAGGT TTTATGTACT GTATATCTTC TAAGCTAAGT GATCGTGGAA ACCAGGCGTC GTCAGCTTCC ATGTTATGAC CGACCAGCTC CTCCTCCGGC CCTCAAGGCT CACCTTGAAG GCGATACATT CCGGAAAGCT CAAACTTATA GTCGAGATAA AACAAGGTTT CAACTCCTCC AACTTGTGTT TAACCAGATT CTCGGCTGGA TTATGATCAA GTCAGGAGCA TATTCCAAAT TGTGGGACGT CGCAGGCAGG TTCACTAATC TATTGGGTCT GGGTCCCAAC TGGATTGTGG GTACTTATCA TGAAAATCAT TGTTGTATGT TATATTTCAT CGCTAATGAA AGGGTAGATC GTGCGGTCTC TCGTATGGAT CACAATCCTC ACCCTCTCTA CCGCCATTCC CGGCCTTCCC TGGTCATACT ACCAGACTTT TGTGCTCGAA GAAAAGCATG GTTTCAACAA GTCAACTAGA ACTCTTTGGG TGATGGACAC CTTGAAAAGC TATCTTCTGT TTGCCCTCTT AGGTCTCCCT GTCTTGGCTG GGTTCCTCAA GATCATTGAA CTTTCTGGAA AGAGCTTTGT GCCCTGGTTG ATGCTGTTCC TGTAAGTCAG TTTCTAGCAG AGTCGACGAT GGTAATTAAT AGCATTGCAG GGTCTGTGTG CAATTGACCC TCCAAATTAT CTACCCCACA TTTAGTGAGT ATCCTCAATG TATACGAAGC ACACGTCCCT AAAAACTTGC ATAGTCCAAC CATTGTTCAA TAAGCTAGCT CCCCTTCCCG CGGGTGAGCT CCGTACCAAG GTTGAAGCCC TCGCGAGCCA GCTGGGATTT CCTCTGAAAC ATTTATACGT TATTGACGGC AGCAAGAGGA GCTCGCATTC TAACGCGTAA GCAAAAAAAA TGGCCAGTTT CAGTTCAACT GACACGTAAA TATCCTGGCT TAGTTACTTC TACGGTCTTC CTTGGTCCAA ACACATCGTT ATTTATGATA CATTGATCAA GGACAGCACT ACAGATGAGG TTGTCGCTGT TCTCGGTAAG TCCTTAACCG AATGTTGTAA ATGTTATTAT TGATAGTTTT CCCCCAAGGC CACGAGCTTG GTCATTGGTA CTACTGTGAG TGTTTCTTTT TTAATCTGCC TTTCAACAGT TCTCTTATGC TTTCACAGCT CATCCCACCA AACTCCTTTT CGGTACTCAA ATTCACCTCT TCCTCACTCT TCTCGTCTTC TCTGTGTTCA TCAACAATCA GTCTCTGTAT GCTGCCTTTG GTTTCAACCC TGAGTTGGCC ATTGCTGCCC CCCAGCCATT CTGCATTGGT TTTATCCTTT TCCAACTCGT TCTGGAACCT ACCGACGCAT TTGTCAAGTT TCTGATGCAT GCTCAGACCA GGAAGTACGA GTACCAGGCT GGTGAGGTTG TCAAGGTTGC TGGCTTGATG GGAAGCTGAC GCTTTTGTAG ATGAGTTCGC GGTCAACCTT GGCAAAAAGC CAGACCTTGC CTCAGCGCTG ATCAAGCTGC ATGTCACCAA TTTGTCTTCC CCTCATAGTG ACTGGTTGTA CTCCATGTAC CATCACTCCC ACCCGACACT TCCTGAGAGA CTCTCTGCGA TGGAAAGATT TGAGAGTAAT AAGGGAGAAG TGGAAGGGAA AAAGGACCTC TAAAGAGGGA CTCAGATGGG TATGCCGATG TCCATAGAAA TTACGTCTGA AGCTCAATAA ATTACGCGGT ATGCATGGTG GGAGCGAGGT GGACTGTCGA TGCACAGTCT CATCTGATGC TATCTTCAGT GACATACCA
|
Protein sequence | MTRSPVALLD GVISHLAHLA DNRAIDYRFI VVLSTWLQTA FEVYILRRQL PCYDRPAPPP ALKAHLEGDT FRKAQTYSRD KTRFQLLQLV FNQILGWIMI KSGAYSKLWD VAGRFTNLLG LGPNWIIVRS LVWITILTLS TAIPGLPWSY YQTFVLEEKH GFNKSTRTLW VMDTLKSYLL FALLGLPVLA GFLKIIELSG KSFVPWLMLF LVCVQLTLQI IYPTFIQPLF NKLAPLPAGE LRTKVEALAS QLGFPLKHLY VIDGSKRSSH SNAYFYGLPW SKHIVIYDTL IKDSTTDEVV AVLGHELGHW YYSHPTKLLF GTQIHLFLTL LVFSVFINNQ SLYAAFGFNP ELAIAAPQPF CIGFILFQLV LEPTDAFVKF LMHAQTRKYE YQADEFAVNL GKKPDLASAL IKLHVTNLSS PHSDWLYSMY HHSHPTLPER LSAMERFESN KGEVEGKKDL
|
| |