| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND04550 |
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| Symbol | |
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| ID | 3257186 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006686 |
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| Strand | + |
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| Start bp | 1253268 |
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| End bp | 1258512 |
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| Gene Length | 5245 bp |
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| Protein Length | 1577 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | 638256390 |
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| Product | conserved hypothetical protein |
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| Protein accession | XP_570600 |
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| Protein GI | 58266888 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.246201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGTTCAATGT CGCCTAGCGC GTCCAATCCG GGCTATCCTC CCTTTCTTTC GCCGCCCACT
GTAGATACCC GTCCATCCCA CCCCGCGCAG TACCAGCCCC AGCCCCAGTA TCACCAGCGA
TATTTCGACC ACCCTCCCCA GCATACTCGC TATTCCCCGG CCACATACGA GTACTCTCCA
TTGGGGATAG AAGGCGCGCC TGAACACGTT CGTCCCGTCA CATTCGCTGG CGGAGGTCAA
CAACCATTTG CAGCCAACCA GCACTACTCT CTGCATCAAC AAGTCCCACA AAAACAGCCC
CAACTTGGCA CACCTGAGCA GCTTTCCGTA CCATCCCAAT ACCCGTACCA ATCCACGCAC
GATCAGTTCC CCCGCCTGGT TGCTTCGTCC CACCTGCCAT ACGGCTCTCC TATCAGTACC
TTGCACTACC CGCAAGTCTC ACAGGCGTCA GTTCCTGAAT CGCCGTCACT GCGGCCAGAA
TCCCGAGGGA ATTCATTGGC ACCCGGATTC CAACAAAATA CCCAAGCAGA GACCTCTACA
AGCTGGCCAC TGCCCCCGAT TCACCCGCTC CCATTCTCTG AAACCCCTCC GAGAGCTTCA
CTGCCCACTA CCACAATCGT GCCTTCTCAA AACGGTTTTA ACCTGGCCAA CACATCCACC
AAAATCCGTT TTCGCCCGCC CCTGTCGCCT GTCGCTATCT CGGGAATGGT GTCAAGTCGC
TCAACTCGCC GGTCTTCCCA GGTCCACCAA GAAGAACAGA CTGTCGGTGC TTCTGGCCGT
CCTCAACGAG GAGCAACGAG GCTCGCAGCG ACGAAATCAA TTTATAAGGA AGATGATGAT
GAGGAGCTAG ATGACGCATA TAATAGTGTT GTTGATGAGG ATGTTGACGA GGGCGCAGAC
AGTACCATCA AAGTCGCGCC AGCTGTGACC ACGAGGTCGG GGAGGACACA GAAGGCACCC
CAAAGGTTTG AGGACGATTT TGAAGACGCT GTCACGTCAG CCAGTCCTGA AATGCGGTCT
GGTAGAAGAA TTGCGAGAGG AAAAGCGAAA AGAAGGCTCA TCGTTGATCC TGATGAAGAT
GAGGAGGGAA ACGCCGTTCC ACCACCTAGA AATGCTTTTC CACCCAGATC CGCGAGGAAC
TCCCTAGCAT CTGCCAACAT TGACTCTGCT CTGCAGCAGC CAGATGTTGG AACTTCTTAT
CCTAATGGCA AGAGGTCCTT ACGAAGCGAT GCTCGCGCTG CCACCCGCAC TCGGCATTCC
TCTGCTGATG CTGACGAATT CGAGCCAACG GAAGGAGAGT CGACAGAAGG GCGCGCATCG
AGTGATCCTT TGGGAAATTA CGACGAAGAA CCCGAGGAGG AGGATTTCGT TGTGTCTGAC
GACGACGACT CAGGATATGG CAAACGCAGG TCCTCTCGCC GACGCACCAC TCGTGCAACG
GCCCGCAATA CGCGGTCCAC AGCTCTTCCC ACTCGCCGTA GTACCCGCTC ATCGGCGAAA
GCTCGTGCGC TTGACAGTGA TGAGGATTCG TCTCCTCACA AACGACCGAA CCTTCGAGAG
CGCACTTCCC GACCAAATTA CCATATCCCC ACGTTGGAAG AGCTTAGCAA AGAAATATCA
ACACAAGAAG CTTTAGCGGC TGTGGCAGGC GGCAGTGGAA GAGCAGCTGG TGGTTTCAGG
GGAGCAGGCG GCGTCAGATA TGGTGGAGTT GGATTACCAT TTGCCATGAG GGCGAAGGAT
CTGACGCAAG CTATGGGTGA TCCTGATACG AGTGATTCGG TGGGTTTTCC TTGACTTGTA
CCTCTGGTAT TAAAATGTAC GTATAAGCTC ATCGTATGTT AAGGATGACA TGGACTTTGC
GTCTCCCTTC AAAAGCGGAG CTGCTGGCCC ATCCATGTCA GGCGGTACTG CTGTAGCTGC
ACGAGGAGCT GCTGGACCAT CCGACGTGCC CAACTTTGGC AGGATTAACC CCAAGTCCAG
TATGTCTAGC TTTTAGATTC CCCCCCTTTC ATTGATCTCT GTTGACACAA GTGCTAGCCA
CGGCAGATGC CGATCCTCTT GGAGTAGATA TGAATGTCAC CTTTGACAAC GTCGGCGGTC
TCGATAATCG TAAGAAATCC CCACTCGACA ACTAGTCGAG ACTGACTAAA ATCATATAGA
TATTAATCAA CTCAAAGAGA TGGTTGCTCT TCCTTTACTG TATCCCGAGC TCTTTCAACA
GTTTGGTATC ACCCCTCCTA GAGGTGTTCT GTTTCATGGC CCCCCTGGTA CCGGCAAAAC
GCTTTTGGCC CGAGCCTTAG CAGCATCGTG TAGTTCTGGT AATACCAAAA TCTGTAAGTT
AATTTATTCA GGCGTACGAT CAAAGGCTTA GACAGCACAG CATTCTTCAT GAGGAAGGGT
GCCGATGTAC TCTCCAAATG GGTCGGAGAA GCTGAACGTC AGCTTCGAAT GTTATTTGAA
GAAGCAAGAG CATCTCAACC CAGTATCATC TTTTTCGATG AGATTGATGG ATTAGCGCCC
GTCAGGAGTA GCAAGCAAGA TCAAATTCAT GCTTCTTTGG TTTCCACACT GCTGGCTTTG
ATGGACGGCA TGGATGGTCG AGGTGAGCGA ACTGTTATCC ATGTAGACTT GATCTGATCA
TCGAACGAAG GCCAGGTCAT TGTTATAGGT GCTACTAACC GCCCTGACGC CGTCGATCCT
GCTCTTCGTC GCCCTGGCCG TTTTGATCGC GAATTCTACT TTGCCCTTCC CAATCGCGAG
GCGCGCAAAA AAATTATTAG CATCAACACT CGTAGCTGGG AGCCCAAGCT GTCGGATGAG
ATGCTTGATA AATTGGCGAG CCTCACCAAA GGATATGGTG GTGCAGATCT ACGAGCTCTT
TGTACTGAGG CCGCTCTAAA TGCCATACAA AGGCGCTATC CTCAAATTTA CAAGACGGTT
GATAGATTGC AATTGGAGAC AAAAAGTATA CATGTGAAGG CAAAAGATTT CATGTTGTCC
ATCAAGAGTA AGTAATCAGC CGATGCTAGA GTGCACCATT GCTGATATGA AGCGGCAGAA
ATCGTCCCCT CTTCTGCCAG ATCAACGTCC TCCCCTGCCA TTCAACTTCC CTCTCATCTA
CTTCCTCTTC TTTCAGTGCC TCTTGAGCGT ATAAATTCTG CTGTCGATCA TGTTTTGCCA
CCCAAGACGC AGTCTACCGC TCTAGAGGAA GCAGAGTATG AAGATGAAGC TTATGAAAGC
TTTGAGAAGC ATATCGTTTT ACAGTGTAAG TCGTACAAGT ATCGCAGCAC CCATAAGCTT
ACATCGATAT AGCTCTAGAT AAGCTAAGAA CATTCCGCCC AAGAATACTT GTGCATGGGC
AACCAGGGAT GGGGCAAATA TTCTTGGGAC CAGCCGTCTT GCATCATCTT GAAGGATTCC
ACATACAAAG TCTGGATTTG GGCACTTTGT TAGGTGATTC TACCAGAGTA AGTCGGGGTG
TGTCTCCACG GATAAGCGGT GCAGGCTAAT TATTTGGTTT AGTCTGTGGA GGCCACTATT
GTTCAACTAT TTGTTGAAGC CAAGCGTCAT CAGCCCTCTG TCATATTCAT ACCTTCTTTG
TCCCAATGGG CTTCTGCCGT TCCGGAACTT GCACGGTCCA CTTTTAGCGC GCTCCTTGAC
GGGATTCCAC CATCAGATCC CATTCTCTTG CTCGCCATAG CGGACAGTCC CTGGGCTGAC
CTTCCTGCCG ATGTCAAAGC GTGGTTTGGG TTTGCTCGTG AAAATAAAAT TGCATTAGAC
TTCCCTAACA CGTCCGAACG ATCTGCGTAC TTCACCGATC TCCTCGCCTC TGTTCGAAAG
CCTCCGACAG ACTTCCCTGA TGGTGTCCCT CGTCGTAAAC GCGTATTGGA AAACCTCCCA
CTGGCTTCTC CGCTTCCTCC TCGTCAACCA ACTGAGGCGG AGCGTGCAAG AGATGAAGAG
AAAGATCAGG CCGCGAGAAA TATGATGGTT GTCTCATTTA CGAATCTGGT GAAGGAGTTT
ATGAAAAGGT ACAGGAAGGT TGTTGCGAGT GTCAAGGTAT GATTTTTGTT TCCAAGACGC
CGGGTCATGT CTCACTGATT GATTACAGGA TGACGCAATG GAGCTCTCCA GATGTCTCGT
TGAGCAGGCT GCTGCGTCAG CTGCTCTTTC ACAATCTGCC ACTGCCCTGA AAGGAGCTGA
GGTAGTTTCA AACATCATTG AAGACGCCAA CAATAATGCT GAGTCTCAAG TCAATGAGGT
TGATGGAGGG ATGAACATGC TTCCCACGAC AGAGAATCTA TCAGAATCAT CAACAGGTGA
CATTGCCAAT ATATCAGCAG CTCCAGTCTC TGCCGTTAAT CATCTCGCTT TACCCTCCGC
TTCAGCGTCA ACCTCAGCAG CCTTGATTCC TACCCCAACT TGGCAGGCTC ATAATGTTGA
CATCGATACT ATCCAACGTC GGCTCATACG TCATAAATAT TATACTCCAG AGGATTTTTT
GGCCGACATT CGCAAAATCG AAGAGAATGC TGTCAAGGTA GGAGATCCAG AGAGGCAGGC
CAAGGTGGTT GAGATGGGCG CAAATGCTCG GCTGCATATC TCTGGATTTG ATCCCAAATG
GACACCTGAA TTTGAGAGAT ATGCAGAAAG GATGAGGGCC AAAAAGGCGG CGAGGCAGAG
AAAGAAGGAA CAAGCAAAGG AGATTGGAGA AGAGAATGGG CAAAACTTAA CAGCGTCCGA
GTCAACACAT CATCCGAATC CCATTGCAGA AATTTCAGGG ATGCCCGATG CCGCTGACAC
ATCGTCTAAA CGACCGAGAG AGGAGGATGA CGGCGCAGAG ATCGAATACC AAGGACGAGA
AAAGCGGTTG CGGGATGACC AGCCTGACAC AGCTGAAAAA GCCTCAGTGG ACGCTCCTGA
AGCATTGACT AGTCAATCCT TTCCACCAGA TATTGCATGC GATTCCCCAC AGCTAGACTA
TCCACCATTC ATTCTACCCG AACAAGACCT TCAAAACCTT CAAGCCGAGC TTGAAACTGC
GACTGCAGAT CTTACAGTTG ACCAGCTCGA ACAACTTCGC GCCACCCTTT TCGATAAACT
CTGGGATGAT AGGAAAGAAT GGAACAGGAC AATGACGGTG ATCAAAATGA GGCAGAGGCT
GCAAGAATAT ATCAAAGAGG TTAATAGTTG GAAAAACGAT TGAAGTTATG AGGAGAGGAT
TTCATTGTTA GCATGGTGTT CCCTA
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| Protein sequence | MSPSASNPGY PPFLSPPTVD TRPSHPAQYQ PQPQYHQRYF DHPPQHTRYS PATYEYSPLG
IEGAPEHVRP VTFAGGGQQP FAANQHYSLH QQVPQKQPQL GTPEQLSVPS QYPYQSTHDQ
FPRLVASSHL PYGSPISTLH YPQVSQASVP ESPSLRPESR GNSLAPGFQQ NTQAETSTSW
PLPPIHPLPF SETPPRASLP TTTIVPSQNG FNLANTSTKI RFRPPLSPVA ISGMVSSRST
RRSSQVHQEE QTVGASGRPQ RGATRLAATK SIYKEDDDEE LDDAYNSVVD EDVDEGADST
IKVAPAVTTR SGRTQKAPQR FEDDFEDAVT SASPEMRSGR RIARGKAKRR LIVDPDEDEE
GNAVPPPRNA FPPRSARNSL ASANIDSALQ QPDVGTSYPN GKRSLRSDAR AATRTRHSSA
DADEFEPTEG ESTEGRASSD PLGNYDEEPE EEDFVVSDDD DSGYGKRRSS RRRTTRATAR
NTRSTALPTR RSTRSSAKAR ALDSDEDSSP HKRPNLRERT SRPNYHIPTL EELSKEISTQ
EALAAVAGGS GRAAGGFRGA GGVRYGGVGL PFAMRAKDLT QAMGDPDTSD SDDMDFASPF
KSGAAGPSMS GGTAVAARGA AGPSDVPNFG RINPKSTTAD ADPLGVDMNV TFDNVGGLDN
HINQLKEMVA LPLLYPELFQ QFGITPPRGV LFHGPPGTGK TLLARALAAS CSSGNTKIYS
TAFFMRKGAD VLSKWVGEAE RQLRMLFEEA RASQPSIIFF DEIDGLAPVR SSKQDQIHAS
LVSTLLALMD GMDGRGQVIV IGATNRPDAV DPALRRPGRF DREFYFALPN REARKKIISI
NTRSWEPKLS DEMLDKLASL TKGYGGADLR ALCTEAALNA IQRRYPQIYK TVDRLQLETK
SIHVKAKDFM LSIKKIVPSS ARSTSSPAIQ LPSHLLPLLS VPLERINSAV DHVLPPKTQS
TALEEAEYED EAYESFEKHI VLQSLDKLRT FRPRILVHGQ PGMGQIFLGP AVLHHLEGFH
IQSLDLGTLL GDSTRSVEAT IVQLFVEAKR HQPSVIFIPS LSQWASAVPE LARSTFSALL
DGIPPSDPIL LLAIADSPWA DLPADVKAWF GFARENKIAL DFPNTSERSA YFTDLLASVR
KPPTDFPDGV PRRKRVLENL PLASPLPPRQ PTEAERARDE EKDQAARNMM VVSFTNLVKE
FMKRYRKVVA SVKDDAMELS RCLVEQAAAS AALSQSATAL KGAEVVSNII EDANNNAESQ
VNEVDGGMNM LPTTENLSES STGDIANISA APVSAVNHLA LPSASASTSA ALIPTPTWQA
HNVDIDTIQR RLIRHKYYTP EDFLADIRKI EENAVKVGDP ERQAKVVEMG ANARLHISGF
DPKWTPEFER YAERMRAKKA ARQRKKEQAK EIGEENGQNL TASESTHHPN PIAEISGMPD
AADTSSKRPR EEDDGAEIEY QGREKRLRDD QPDTAEKASV DAPEALTSQS FPPDIACDSP
QLDYPPFILP EQDLQNLQAE LETATADLTV DQLEQLRATL FDKLWDDRKE WNRTMTVIKM
RQRLQEYIKE VNSWKND
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