Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND04390 |
Symbol | |
ID | 3256892 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | + |
Start bp | 1213502 |
End bp | 1215483 |
Gene Length | 1982 bp |
Protein Length | 576 aa |
Translation table | |
GC content | 47% |
IMG OID | 638256374 |
Product | hypothetical protein |
Protein accession | XP_570113 |
Protein GI | 58265914 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CGTATACATC TTGTTCACAT CTGACTCGTC ATCCGTGGCC CTCTGCATGC TGTCATTGCT CAGGGGAAGA CTTCATCCAC CATGGACAAG CCTTCTCTTC CCGAGTACTT AGTCGGTGGC CGCTACTTCC ACGCAAAGAC TCGACGTCCT GTTACCCTTC GGTATATTGG TCACCTTCCT CCGTCATCGT CATCGCGGGA TCCGTCTTCT CAAGTATGGC TAGGCATCGA ATATGACGAT CCGTTGTTCG GCAAACATTC TGGCGTCTAC CAAGGCATTC AGGTGTTCCA CACTAGAGAA GAAGGCAGTG GGGCGTTCTT AAAGTTCGCG GGAAGACCAC TTCAAGAAGG CAAAAACTTG GTCCAAAGCA TAGAGGAAAG GTATGGCCCG ATTATTCCTA ACGACGAGGG ACAGCCTCCT CAGATAGCAG GCAATGTGCA TGCCAACAGC AAAGGGCTCA TATTAGGCTC ATCGAAAGGC TCTATAATCG TGGAAACCCC TAATAACTGG GCAGATGCTC AAAAGAGAGT AGGTAACCTG GAAAAGCTGA GGATCATGGG GTTCGAAGAC GAAGGAATAA CTGAATTGGG AGGAGACAAA AACCTTAGAG ACATCATGAG GGCTAGGTTA CGAGGTGTAG AATGGTTAAA TCTCTCCAGA AACCTTCTGA AAGGGTGGGG AGAAGTTGCA CAGATCGTGG AGTGTTTCAA AGGACTACAG ACTTTGACCT TAAGGTATGT TACATGATAT CTGTACACGT CAAAAGTGGT TTATTGATGA TTTGCGTCAA AAGCCATTCC CGATTCGACG GATTGTCAAG CGATCTTCCT GATGACACAA GACAACGACT CGGAGCCTTT AGCAAGATAA GAGAGCTTCA TCTCTCAGAC TGCTCAACAA CGATGAAAGA GGTCGTACTT ATAATCTCGT TTCTTCCCAA TCTTCGGGTA TTGCATCTTG AGGCCAATCG GACAATATCG ACTCTTTTGC TGGACGAACA AGAGTACCAG ATACTCGATC GTTGCAAAAC ATTGAAAGAG CTTAGGCTAG GAGGATGTCC AATTAGCCGA TGGGACGAAA TAGCTGTCAT TCTAGAACAT CTATCAGGGT AAGTTTAATT CCTTGGTAAC AAATTGTTAT CATTGACCCC TGGATATCGA ATCAGGCTAG AATCTCTTGA TTTGTCATTC ACACCTCTTT CACATGTGCC ACGACCTTCA ATCACCACTT ATGCAAACAT TAGAAGCCTG TCATTATTCG GATCTTGCCT CTTGCGTTGG GAGTACATTG ATCATATATC CCAGTACTTC CCGGCGTTAA CCTCATTACG GTTCTCGCTT TCGTCCGGCG CGATATCTTC TATCGCTGCA AAAGGCACTC AAAACTCTTC CGCATTTATC TCGGCCTCGT CCGATCTCCA GCGCTCGTTG ATAATCCCAA AGCTCCCGAA TCTTATCGCT TTTAACTCTA CCACTATCAC ACCTTCTGAA AGGCGAGATG CAGAGCTCTT TTACATCAAT CACGTCAAAT CACGTCTATC TGAACATCCG GACGAAAGAG AAAGTTGGGG TCGATATGTC GAACTGTGCA AAGTTTATGG AAGGGACGAG ACATCAACGG AGAAGAAGCC TGAGGCTGGG CTGAAGAGGA AGATGATCAG TAAGTGTATC CCCGTTTCGT CTCGCGATTC GCTTAACACG CCAACATTGT TAGCCCTCCG TGTCTACAAG CACCCTACCG ATCCTTCCCC CGGCACCCTC GCTTTGTTAC CTTCATCTTC AATAAAGTTA CTACTACATA GGGTATCGCG ACTAGTAGGG GCTACCAGTA CCGCTTCGCC ACGTCTCTGG ACTGTAATAG ATAAAGGGGG AGAACTGGAG AAAGTTATTG ACATCTCAAG GAAGAGGGAA GGCAACGACT GGACCGTAGG ATGGTGGTTT GAAGACGGCG ACTGCGTACT TGTAGATGAA GATGAATCAT GA
|
Protein sequence | MDKPSLPEYL VGGRYFHAKT RRPVTLRYIG HLPPSSSSRD PSSQVWLGIE YDDPLFGKHS GVYQGIQVFH TREEGSGAFL KFAGRPLQEG KNLVQSIEER YGPIIPNDEG QPPQIAGNVH ANSKGLILGS SKGSIIVETP NNWADAQKRV GNLEKLRIMG FEDEGITELG GDKNLRDIMR ARLRGVEWLN LSRNLLKGWG EVAQIVECFK GLQTLTLSHS RFDGLSSDLP DDTRQRLGAF SKIRELHLSD CSTTMKEVVL IISFLPNLRV LHLEANRTIS TLLLDEQEYQ ILDRCKTLKE LRLGGCPISR WDEIAVILEH LSGLESLDLS FTPLSHVPRP SITTYANIRS LSLFGSCLLR WEYIDHISQY FPALTSLRFS LSSGAISSIA AKGTQNSSAF ISASSDLQRS LIIPKLPNLI AFNSTTITPS ERRDAELFYI NHVKSRLSEH PDERESWGRY VELCKVYGRD ETSTEKKPEA GLKRKMITLR VYKHPTDPSP GTLALLPSSS IKLLLHRVSR LVGATSTASP RLWTVIDKGG ELEKVIDISR KREGNDWTVG WWFEDGDCVL VDEDES
|
| |