| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND04250 |
|---|
| Symbol | |
|---|
| ID | 3256886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006686 |
|---|
| Strand | + |
|---|
| Start bp | 1180687 |
|---|
| End bp | 1183468 |
|---|
| Gene Length | 2782 bp |
|---|
| Protein Length | 724 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638256360 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_570588 |
|---|
| Protein GI | 58266864 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0143] Methionyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.396797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTACTTCTCT TCAACTTACG ACTACTGGCA CATATCATGT CTGTCCGGAA TATCAGAGAA
GCCGAAGGTC TCCTCATGGA GGTCCATGAC CCCTCTAAGG GCCCAGTGTA CGTCGTTGAA
TTGAAAGGCT ACAGATTTCA AGAGCTCGAG CTGACTTACC TCGAGCCTCC CAAAGGACGG
ACAAAGAAAC GTCCTTATCA CTTCTGCGTT ACCTTGTAAG TCACTTTTAC ACGTCCTTGG
TATACTGGAG GGTGGAGAAA TGTGAATGAC CTGGCGGGTA CTAGATGTGA ACAACGTACC
ACACCTTGGC AACATCATCG GGTGAGCGGC CATCCAGTTG CAAACCATGC AAGTACTGGT
TGCTTATCGT TACAGCTCTA CTCTTTCCGC GGACGTTTTT GCGAGATACA ATCGGACACT
CAACGTACCG ACCCTTTATG TGAGCTTGCG CCTCTGTCAT GTCATCCACA GCATATCTAA
TATGTATTGT AGATTTGCGG AACCGACGAG TATGGAACCG CTACGGAGAC GAAGGTATAG
CTTTGAATCT TTAATATCTC TATCTCCCTA ACAACATCAG GCCTTAGAAG AAGGTGTCAC
CCCATACGAA CTCTGTACCA AATTCCACAA ATTGCATACA GAGATTTACG AGTACGAGTC
TCCTCGTGAT TATTAGTGCG TCACTGATGA TCTATGCTGT AGGTGGTTCC AGATCAGCTT
CGACAAATGG GGGCGTACTT CGTCTCCGGA ACATACTGAG ATCACCCAGG GAATTTACAG
ACGTCTCCAT GATAACGGCC TTTTCCGTCT GGAAACCACC GACCAGACTT ATTGTGTAGA
TGACAAGCTC TTTTTGGCTG ATCGCTTTGT GGAAGGCATC TGTCCCAACT GCGGCTATGA
TGTGAGCAAA CATATCAAAT ACATCACATT TGGATAGAAT GTTAATCAAG CGCAGGATGC
CCGAGGTGAC CAGTGTGACA AGTGCTCGCT CACCTTTTCA TCCCCTACTC AACTCCTTAA
CCCTCGCTGC AAACGCAACA AGGCACACAC CCTCTCTGTT CGACCCTCTA CTCATGCCTG
CTATCGTTTA GACCTGCTCC AGCCTCGGCT GGTTGAGTGG ATGCAAAAAG CCCGTGTCAA
GGGAAAGTGG GGAACAAATG CGGTCATCAC TGAAAAGGGT GAGATTGTGG AGCCGAGGAT
GCTAGGAGAA GGTTTAAGGC CTAGTGCCGT GACGAGAGAT CTGAAATGGG GTGTTGAAGT
TCCGAAAGTC GGAGACGAAG AGGAGGATAA GGCCATGGAA GGCAAGGTAA TCTGTAAGAT
CATTATCCTC GTTTGTTGCC ATTTGCTTAC TCGCAGTAGA CGTTTGGTTC GATGCTCCTA
TCGGCTATCC TTCGATCACA GCAACCTATA CCGAAGAATG GGAAAAATGG TGGAAGAATC
CTGACAATGT AGAGCTCTAT CAATTCATGG GCAAAGACAG TCAGTTCATT GATGGATAGT
GACTCAATAA CGCTGACAGC GTATAGACGT CTACTTCCAT ACCGTTCTCT TTCCGGCTAT
GCTGCTTGGT ACCGAAGAAC GCTGGACCAT GCTTCATAAC ATCTCCAGCA CTCAGTATCT
GAATTATGAG GATACAAAGT TCAGCAAGAG TAGGAACGTT GGTGTGTTCG GCAACAATGC
TCGAGAGACA GGACAGCCTC CTGAGATTTG GAGGTATTAT CTCATCTCTC AACGACCGGA
GAACAGCGAC TCCTCCTTTT TGTGGTCCAA ATTCATTGCC GCTAACAACA ATGAGCTTTT
GGCCAATCTG GGCAACTTTG TCAACCGAGT GAGTCTGTTA TGGCAAAAAA GAGAGACTTT
TACTGAATTA ATGTCAATAG GTGGTCAAAT TCATCAACGC GAAACTCGAT TCTAAGGTAC
CCGGTCCGGA AGATTTCGCC GGTGGCGAAG TTGCTCCCCC TGCTGATTCT CTAGACGTTG
ATTTTGTGAC TGATGTCAAC ACCCGCCTCA AAGAGTACCG CGAGCAAATG GATGACACTA
AACTTCGCGG TGGTCTTGCA ACGGCAATGG CTCTTTCTGC TCGTGGTAAC CAATACCTTC
AAGAAAATTC TTTGGACAAT GCCCTTCTCG CAAGCAACCC CAAGCGATGT GCCGAGGTTT
TGCTCAATGC TGTAAACCTC ATTTATGTCC TGAGCGTGGT GTTCCACCCC TTTATGCCAA
ACACATCTGA AGGTATCTTG CGGCAACTCA ACGCTCCTGC CCGATCCCTG CCCACTAAAT
TCTCTATTGA TATTCTTCCC GGACATGTTT TGGGTAAAGC CGAATATTTA TTTAAGAAGA
TCGATAACGT CAATGGAGAG CAGGAGAAGA AATGGCAAAG GCAATACGGA GGAGATGCTG
TGGTAGCAGA TCACGTTGCG CCACCAGGTC CAGGCGGTCA CCCCGAAGGC GGGAAAGTTC
CGAAAGTCAA GGATACCGAC GCAGAGTCCA AAAAGGCTGC GCACGAAGCT CGCAGAGCCC
AACTTGCGAA AGAAAAAAAG GCTGCTCAGG CTGCTGCTGA TGCGAAGAAG ACTCCTGAGG
AGAAGGAGTT GGAGGCAAAG GTGGAGGCTC AAGGCAAGAG GCTAGCAGCG ATCAAGAAGG
GATTAGAAGA AGGTGACGCT GAGAAAGAGA TGAGCGTCGC GAAGAGCTTG AAAACTGAGT
TGGCTGATTT ACGAAAGAGG CTGAAAGGAA CTACCATTTA AATAGTAAAT CTGGATAGAA
TAGATATAAA GATGTCAATA TA
|
|---|
| Protein sequence | MSVRNIREAE GLLMEVHDPS KGPVLPKDGQ RNVLITSALP YVNNVPHLGN IIGSTLSADV
FARYNRTLNV PTLYICGTDE YGTATETKAL EEGVTPYELC TKFHKLHTEI YEWFQISFDK
WGRTSSPEHT EITQGIYRRL HDNGLFRLET TDQTYCVDDK LFLADRFVEG ICPNCGYDDA
RGDQCDKCSL TFSSPTQLLN PRCKRNKAHT LSVRPSTHAC YRLDLLQPRL VEWMQKARVK
GKWGTNAVIT EKGEIVEPRM LGEGLRPSAV TRDLKWGVEV PKVGDEEEDK AMEGKVIYVW
FDAPIGYPSI TATYTEEWEK WWKNPDNVEL YQFMGKDNVY FHTVLFPAML LGTEERWTML
HNISSTQYLN YEDTKFSKSR NVGVFGNNAR ETGQPPEIWR YYLISQRPEN SDSSFLWSKF
IAANNNELLA NLGNFVNRVV KFINAKLDSK VPGPEDFAGG EVAPPADSLD VDFVTDVNTR
LKEYREQMDD TKLRGGLATA MALSARGNQY LQENSLDNAL LASNPKRCAE VLLNAVNLIY
VLSVVFHPFM PNTSEGILRQ LNAPARSLPT KFSIDILPGH VLGKAEYLFK KIDNVNGEQE
KKWQRQYGGD AVVADHVAPP GPGGHPEGGK VPKVKDTDAE SKKAAHEARR AQLAKEKKAA
QAAADAKKTP EEKELEAKVE AQGKRLAAIK KGLEEGDAEK EMSVAKSLKT ELADLRKRLK
GTTI
|
|---|
| |