Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND04190 |
Symbol | |
ID | 3257209 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | + |
Start bp | 1168599 |
End bp | 1171105 |
Gene Length | 2507 bp |
Protein Length | 538 aa |
Translation table | |
GC content | 46% |
IMG OID | 638256354 |
Product | conserved hypothetical protein |
Protein accession | XP_570586 |
Protein GI | 58266860 |
COG category | [S] Function unknown |
COG ID | [COG3781] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GGCCTATTAA ATAGTAATCC CTAAAGGCGT ATTCTACTCT CATAAACGGC CCCTCATTGC CACCATGCCG TCGCCTAACA GCTCCCCCAA GGGCACATCA TCCACCAAGA AGAAACACGC ACCTACTTCC GCTATTTCGA CTTTGGTAGG TCCAGTACAG GCTTATCTGG CCTACGCACC CATTTCCACA GAGAACAGAA GAGGTCGTCT CCTGCGTGTC AAACAGGATG ATGTTGTGAA ACAGAAGAAG ACGTAGCTGA TGTGAACATT GCATGCCCTT TAGGGAAGTA CAATAGCTCT ACCGCTGAAC ACGTTAACCT CGCTTTTGAC TCTCCAAAAT GCTGAAGACA GTAAACCGAG GGTGCGTCAA TCAATGAGTA CAGGATTCCC AGAATTAACT TCCAGTTTGT TGACCGAATC TATTTGTTTA GCTTTCAAAA CTATCATGGC TTCCAGATAT TGTTGTATAC AAGTCTTCTA TTTTGCCCAT TGTACTAGGT CCGGTCTTGA CTGTGACGTT GTTCTCGGCT GGTGTCGCCG CTGCAAGCCT GTGGTGGGAT AAAGAAGTAG GGCTAACGAA CAATGTGGTA CCTCTTCTGA GTGTCGTGGT GGGATTATTG CTTGTGTTTA GGTCAGTTAA TGCTTTGCAT ATCCATAGCC AGATGAGGCT GAGAACAAAC TGATAAAAAA TAAAAACAAA GGAACTCATC AGCTTATGAG CGTTATGCCG AGGGTCGCAA GGATTTTACT TGCCTGATAT CTACTGCACG CAATCTTTCA CGCAATATTT GGGTTGCTGT CTCGCTTCCT TCACCATCCA ATGGGGCTGC AGAAATTCAA ATAAGCAGAA ATAATCTGAC GGAGGAGAAA AAGAAGGTGA TAAGACTTGT GGTAGCTTTT GTAATAGCCA CAAAGCATCA TCTGAGAGGA GAAGATGGCG TGCAACATAA TGACCTCAAA GGTGCTGTTC GCCAAGCAGC GAGGAAATCA GTTTGCTAAC GCATCCTCTG TACTTTAGGC CTCCTTCCCA CGACCATGAT GAATTCCAAA AATTGGCGAT CTAGTTTCAC CCCTCCAAGC TTCGTTTCCA CACAGCACCT TTCCAGCTCG CCTAATGCGT ATGACGACCA CGAAATTGAC GAAGAAACTT CTCTAGGTCT GGTCTCTTCA TCGCCCATCG TGGCACCTGG CCAGTCCGGA TCTTCTAATC GGTGGAGAAC TGCGAATAAC AGTTCTTCGC ATGGCCGAGT CTCTGCAGCA TTAAAAGAAG GGCCTTGCGT AGGAACAGGT CTGAAAAGAC GGCCCACGGC TATAAGAATA ATCGTGGCTG ACCATGATGC CAATGGAAAG AGGTCTGGCT TGTTTTCAGG CAATCGAGAG GAAAATGGTA AAGTGGATGA ACGTACGCCA ATGATCAAAA CGCGTGTAAA ATCCGGTCCA TTAATATCAC TTGGGGAACC AGGAGGAGCG GAGATAGGCC TCGGAAAAAT GGTTCAATTG GGGCTTCCCC TTATTATGTA TGGTTACGCT GTGCCACTCA GCTGATAGTA GCTGATGGTC TGGATCGTCA GAGCACACGA AATTAGTCGC TCCATATTCA AATTTAGAAG AATGGGCTGC TTGGAGACTG GTGGCCCTGC TGTGAGTAGT TTTATACTGT CAATTGGGTC CTTCTCACAT TTCCGCCTGC CGACCATTTT TGCGAGCAGG GTCTGAACTC CCTACAAGCG GCTGTGTCGT CCATGATAGA TCAGCTTGGC TCTATGGAGC GAATGTAAGC AATTATACTA TTAGTTACTG TCTTCCATGA TCATACTGAT AATTTGACCA ATGACAGCGT CCAGACTCCA CTACCATACG TCTTTTGCGT CCATCTCAAA CAAGTTGTTT CTCTTTACCT TTTCATCCTT CCATTTACCC TTGTGGATGC AATGGGCTGG AAGATGGTAT TCATCATGTT TTGCATCAGC ATGACATTCA TGGGCGTCGA GGGTATAGCT GCAATGATTG AACAACCTTT TGGGACGTAA GATAGTTGTA TATTCCGTTG GCGGCTGAAG CGCTGATTAT ACTGTCGGAC GCACGACCAC AGGGACCCCA GTGACTTGAA CTTGGACTTA TACTGTACAG AGTTGCTTTG CGAGTGCGAG TAAGTGACGT CTTCTTCGTT GATGCACTTG CAGAGTTCTC ATTGAATGTC TGATGCACTT GTAGAGGTCT CATTGAATGT CTCTCTGAAG GTGATGAAGG GGACATGCCG ATCTATAGCA GACCTATTAT TGTAGATCAA GCCACGGTCG ACTTGAGTGC TGACGACAGA GAGGACGATT GAAACACTTG GGCCATTTCC CTTTTCTTAT TATCAGGCTA CAAACGCTTT GTTTGTCGAT GACCCATATA GAGTAGAAGT GAATGCTAAG TCCTCCTTCA TCGTTCTCTC TAGCGAGAGG CAAGCGGATC AAACCGTCGA TAACGCGGAT GGGATGGGCG ATTGAACGAA AACCGGA
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Protein sequence | MPSPNSSPKG TSSTKKKHAP TSAISTLGST IALPLNTLTS LLTLQNAEDS KPRLSKLSWL PDIVVYKSSI LPIVLGPVLT VTLFSAGVAA ASLWWDKEVG LTNNVVPLLS VVVGLLLVFR NSSAYERYAE GRKDFTCLIS TARNLSRNIW VAVSLPSPSN GAAEIQISRN NLTEEKKKVI RLVVAFVIAT KHHLRGEDGV QHNDLKGLLP TTMMNSKNWR SSFTPPSFVS TQHLSSSPNA YDDHEIDEET SLGLVSSSPI VAPGQSGSSN RWRTANNSSS HGRVSAALKE GPCVGTGLKR RPTAIRIIVA DHDANGKRSG LFSGNREENG KVDERTPMIK TRVKSGPLIS LGEPGGAEIG LGKMVQLGLP LIIAHEISRS IFKFRRMGCL ETGGPAGLNS LQAAVSSMID QLGSMERIVQ TPLPYVFCVH LKQVVSLYLF ILPFTLVDAM GWKMVFIMFC ISMTFMGVEG IAAMIEQPFG TDPSDLNLDL YCTELLCECE GLIECLSEGD EGDMPIYSRP IIVDQATVDL SADDREDD
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