Gene CND04080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND04080 
Symbol 
ID3256981 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand
Start bp1137744 
End bp1139583 
Gene Length1840 bp 
Protein Length410 aa 
Translation table 
GC content50% 
IMG OID638256343 
Productmitochondrial carrier protein rim2, putative 
Protein accessionXP_570145 
Protein GI58265978 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACTTG AAATCTTCCG TAGGTAGTGC ATTTCTTGCC ATTTTTATTA GACTCCCTCC 
TGGACTGTCT CCCGAAATCG CCTATACACT GCCATGTCGA CACAATCTTT CTCCCAATCG
TTTCTCTCCT CCACAAACCC AAGTTCTTCC CCATCCCCTC CCGCTGCGCC ACCCTTAAAT
TTATCCGCAA AGACGGAGAA GAAGCTGCAA GGATGGCAAC ATAGTGCTGC CGGAAGGTGA
ATGTGTCGTT ATCACCCTTT GAACGATTGT TGCTAACAGT TGTGTGATAT ACAGTATGGG
CGGTATGACT GGCGCCATTG TCACTTCTCC ATTTGACGTG GTCAAAACCC GTCTGCAGTC
AGACATGTTC AGGCATTCAT CTGACGAAGG TGTACGACAT GCGGCGGAGG TGGCCAAGAA
GGGTGGTAGT AGTGGAGGTG TGAGGGGTGT CATGTGGCAA TTTGTGGATA CCGTATATCT
AATCAAGTGG GTGTCACATG TGTATCAAAA CTTGGGTAGG GAGAGACTCT AACGACGGTT
TTGTCAACCA GGCGGATAGC TGTGGAGGAA GGTTGGAGAG CTCTTTACAA GGGCTTAGGA
CCTAGCTTGG TCGGTATTAT CCCTGCTCGG TACGTTTCGG TTGAAGACTG CAATTTGAGT
GCTACCGAAA GAGTTGACGC TGTTGTAAAA CTTAGAGCAA TCAACTTTTA CTTTTATCCA
ACATCCAAAG TCTACCTTGC CAAGCAATTT CCTAATGCGC CCACTGAGAA ACCAGGACAA
ACAGCAGAGG ATAGTCCGGT TATTCACTTG GGTGCGGCAG TCGTAGCTGG TATCATGACA
AGTACTGGAA CAAATCCTAT TTGGGGTGAG TGCTGTGGAT GAGATCTGCC AAAGTCGCTA
TGAGCTAAAC GATGGGGCTG CCAGTGGTGA AAACTAGACT GCAGCTTTCG GCGAGAAAAA
AGGAGACGGG CGTCGTTTCG GCAAAATCAG GATCGATTTT GCCCAAACCC ATAGCCGCCT
CTGCTGCCTC CCTTGCTAGC CAGGCCTCTA CGCCCATCAC TGCAGCAGCA GCATCGGCGG
CGTCGACCAG GACAGTTGCC AGGTCGTCTT TGACTCCCGC TTTCTCAATG ACGATGGATA
TTATAAAAAA GGAAGGTATC AGAGGGCTGT ATAGAGGTTT ATCGGCCAGT TATCTGGGTG
TCTCTGAGGG AGTGATCCAG TGGGTCTTGT ATGAAGTGAG TGTTTTTTGT CTTTCTGTGT
CTCTCCCATG TATGGAAGCT AACCATCCTC GTACCGCCTT GCGCGTAGCG ATTCAAACGA
TTAAACGCCG CGACCACGAC AGGTCTTGAA TCCCAACCTC TCCTCTCCTA CATCCCTCAT
ATCGTGGGCG CCTCGGGCGG TGCCAAGGCG GTCGCATCTC TTATCACGTA TCCCCATGAA
GTCATCCGAA CACGTCTTCG TCAACCTGCC CTTCCTGATG GCACCGTCAA GTACAAGGGG
TTGCTGCAGA CGCTGAAGCT CGTTTGGATG GAGGAGGGCG TGGGTGCATT GTATGGCGGT
TTGACGGCGC ATTTGTTCAG GGTGGTACCG AACGCTGCCT GTATGTTCTT GATCTATGAG
CTGGTGGCTG CCAAGTTGGG CGCGTGATAC CCCGACTGAA AACGCAGATC TGCAAGGAGA
AGGATTTTAA AAGGGGGCGT GATGGATACG TCTCTCGAGT CAGATATCAC ACCACTCGAA
CCTTGATTCC ATAAATAGAT AGATAGACTC ATCTCTCAAT TTTGTCAAAG CCTAGTGTAA
CATTACATTC ATATATTATT GCCCTGCATG CAGATACCCT
 
Protein sequence
MSTQSFSQSF LSSTNPSSSP SPPAAPPLNL SAKTEKKLQG WQHSAAGSMG GMTGAIVTSP 
FDVVKTRLQS DMFRHSSDEG VRHAAEVAKK GGSSGGVRGV MWQFVDTVYL IKRIAVEEGW
RALYKGLGPS LVGIIPARAI NFYFYPTSKV YLAKQFPNAP TEKPGQTAED SPVIHLGAAV
VAGIMTSTGT NPIWVVKTRL QLSARKKETG VVSAKSGSIL PKPIAASAAS LASQASTPIT
AAAASAASTR TVARSSLTPA FSMTMDIIKK EGIRGLYRGL SASYLGVSEG VIQWVLYERF
KRLNAATTTG LESQPLLSYI PHIVGASGGA KAVASLITYP HEVIRTRLRQ PALPDGTVKY
KGLLQTLKLV WMEEGVGALY GGLTAHLFRV VPNAACMFLI YELVAAKLGA