| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND04010 |
|---|
| Symbol | |
|---|
| ID | 3257145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006686 |
|---|
| Strand | + |
|---|
| Start bp | 1115448 |
|---|
| End bp | 1116958 |
|---|
| Gene Length | 1511 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | |
|---|
| GC content | 44% |
|---|
| IMG OID | 638256336 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_570639 |
|---|
| Protein GI | 58266966 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5078] Ubiquitin-protein ligase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CAGAAGCTTA AGAGTTAAAC GATTTGGTTC AGATCTATAA CTAGTCTTTG ATTCTTTATA
TTTTCTGTTT CTTCCTTATT AAACGTGAAC TCTTATCTTT CCGTTTGATT AACTTATTAC
TGCAGAATAG CATTTATTGT CATGGTAAGC TCGGCTTCCC TCGCAATTTA TATGGTATGA
CATTCGCTGA AATAATATGT TTAGGCTCTC ACACCACAAG CCCTTCGTCT ACTCTCCCGA
CAGATTATGG CCCTCAAGTC CGACCCTCCA GAGGGGGTAA GGATAGCAGT CGGTGAAGAG
GATTTCACAG CTCTAGAAGG CTGGGTTCAA GGTCCTTGTG CGTAAAGTTG AGGAATTTAA
ACAACCTATA TAGAAGTTTA TCCAGATAAA TGCGAGCATG CTCGTAGGAG ATTCACATAG
TTGGAGACCA AAAGAGGAAG GCTGGTCATG TTGGAGTTTG CAGACTGACT GTCCCTTTGC
AAATAGCTGG CACGCCTTAT GAGGGAGGCT ATTTTCGCAT CCGCTTCGCT TTCGGTTCTG
AGTTTCCGAA CCTTCCACCA AAATGTGAGT CATCGTTTGT GCCTTGGTGG CCGAGCGTGT
CCCGTGCAGG ATATGCCGAG TTATGCTTAC TTCGTCACTA ATGTATGACT TCACAAGGTA
CCATGGTGAC TAAGATCTTT CATCCAAACA TCTCCAAATC AGGCGAAATT TGCGTCGATA
CGTTGAAGAA AGGCTGGAAA AAAGAATATG GTGTAGGCCA TGTCCTCATC GTATGTGTGC
ACCACTACTC TCCTTTCCTT TTCTATTCTA CCTCTGACTT TGTGCAACTT GAAATTTGCC
ATATCTTTAC CAGACTATCA AGTGTTTGTT GATTTTTCCC AATCCCGAAA GTGCTTTGGA
TGAAGAAGCC GGTAAACAAC TCTTAGAAGA CTATGAGGGC TACAGTAAAG TAAGTAACAA
GTAGATTTGA CTCTGCGTCC AAAATTTCAC CTAGGACTAT GGAAAAGACT GAGCTGACTG
ATGGAGCGTA GTATGCCCGT CTAATGACTA GCATCCATGC CATTCCCAAA GCAAGCATCA
ACTCGCTGCC CCATTAGGAT GATGTTAACT TCTATCAATT TATAGGTTGC GCCTCCTGAA
TTTCGGGTTG CAAAAATGTC AAGGTCGGAC GAACATATGC CGACCGGGAC ATCACCAAGT
CCCATGAACA ATTTATTGCA CAGACCTATT CCACTTGGCA ACAGTAGCTC GCAAGAACAG
GGCCCCATTC TTTCTCACCC GGGGCAGCAT GTGCAGGATG CGAAGAACGA CTTGAAGGCC
TTTGGGAACT CCAGAGCCGC ATGTAGCGGC GGAATCAAGA CAGCACCTAT GAGCAAGGTT
AAACGAGGTG CAAAGAGGTT GTAGATATAA AAATATTTTG CAAAGACATA TAACGCAACC
TATCGATAGC CCATAAATAA GTACCATATC GATCTTGCTA GTCACAGAAC GAAAAATGGT
TGTTGGAGCC T
|
|---|
| Protein sequence | MALTPQALRL LSRQIMALKS DPPEGVRIAV GEEDFTALEG WVQGPSGTPY EGGYFRIRFA
FGSEFPNLPP KCTMVTKIFH PNISKSGEIC VDTLKKGWKK EYGVGHVLIT IKCLLIFPNP
ESALDEEAGK QLLEDYEGYS KYARLMTSIH AIPKVAPPEF RVAKMSRSDE HMPTGTSPSP
MNNLLHRPIP LGNSSSQEQG PILSHPGQHV QDAKNDLKAF GNSRAACSGG IKTAPMSKVK
RGAKRL
|
|---|
| |