Gene CND03680 details

Gene Information

• Locus tag: CND03680
• ID: 3257144
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006686
• Strand: +
• Start bp: 1017215
• End bp: 1023624
• Gene Length: 6410 bp
• Protein Length: 1843 aa
• GC content: 49%
• IMG OID: 638256302
• Product: conserved hypothetical protein
• Protein accession: XP_570576
• Protein GI: 58266840
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG5021] Ubiquitin-protein ligase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.421578
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACAACC AAGGGCTCCC TTCGTATCCT GAATGGATCA AGGTGGGGCC TGTGAACGTC 
ACCATTGCTG TTCGTCTTCG ATACTTTTCA TTCAAAGCTA GACGAAGCGA GGTGTCCTTT 
TTGAGAATTT TGTGATAATG GTACTGACTT GGGTCTTAGA CAGCCACCAC AACCTTCCAG 
TTCATCGATA CCTGGCCCCG AAACCGATCG CAAAGGCAAA AGGCGCGTTA CTCAGCTGTC 
ATCCTCCGCG GAGACACCTC CAACGAAAAA GCCAAAGCGT TTTTCTGCAT CATCTGCTGG 
GTCGACGTCG ACTGCCACGA AAAGATACGA GTTACGAACC AAGCCTGAAG ATCAAGTTTC 
CACTAGTGTA AAAGAGGAAG AGAAGAATAA AAATTTTAAG AACATGCCAT CCAAATCAAA 
GTGAGTCTCG CTTAGATTAT TGGACTGGAA GTTCGCGAAT GACCATGGAG TAGCCCCAGG 
AAGGGAAGCG GTTTCGGAAA TTCAAGTGAA CGAGGAAAGA AAGGCGAGAC ATGTAAGTTT 
CGCTGCCTCA TTATAGACCC ATCACTCATC AAAGATCAGC TGCGCGGCAT CTTGTCAGTG 
ATGAGTACGA CGACGAAGAC GATTCTCTTT GGATTGACGA GCCGGAGGGC GATGTGACGG 
TAGCAGAGGA AAGTGATATG GCCGACGATT ACGATCATGA AGAAGATGAT GAGGACGATG 
AGGATGGAGA TGGGGATGAA AATGGAGACA ATGATGGTCC TGGCGGGGGC TTTGGCAATT 
CCGCCTATGA TCGCCTTGCT CGTTTAGCGT CAGAAAGCGG AGTTAATCTT GACGATGCCA 
CTGCGGCTTT GTTTGGGTCT GGTTTCCGTG CGTTCGGTGG CGTATCTTCC GGCCTGTCAA 
ATCGCTTGCG GAGGCTGAAG AAAAAACTTC ATTCCAAACG AATCGCCACT CGACTTGCAG 
CGCTGCGAGA ATGCAGCGAG CTGCTTCTAG TGAGCAACGA GGACACTCTC GGCGGTACCT 
TCTCTCCCAC ATCTTTCGCC ACCGAATTTG TTGCCATCTT GGACGGCAGA CCCAATATTG 
AAGAGGGCGA AAGTGATGAG GAGGAGTCAG TGTATGATGA TATGGACGAA GACGCTCAGC 
TAGCTGCGGC ATTAGCTCTT AGCTCCGGTG ACGCTCCTGG AACTGATGGT GAAGAAGATG 
AGATGGAATG TCAACTTGTG GCTTGCCGAT GTCTGGCGCA CTTGATGGAA GCCTTGCCTG 
GTTGCGGGCA TGCCTTGGTC CAGATAGGAG CGGTGCCAAT TCTTTGCTCC AAACTTACTG 
AAATATCATA CATTGAACTG GCAGAGCAAA CTCTTAGCGT GAGTATCATC AGAATACGAC 
GTTGTTCAGT GCTGACTCTG TTGCAGACTT TGGAAAAAAT CTCTGCAGAG TATCCCTCCG 
CAGTCGTCCG CGAGGGCGGC CTGGGTGCCC TGCTTAATTT CCTTCCCTTT TTCTCCACCA 
ATGTACAGCG CACAGCTGTA ACCGCAGCTG CCAATTGCTG TCGAAACATT TCCAGCGAAC 
ACTTTTCTAA AATCAAAGAA GTTTTCCCCA TCTTGCGCGA TACTCTTTCT TCTGGCGATC 
CTCGTCTTGT CGAGCAGGCC ACACTTGCTA TCGTTCGAAC CACGGAATCC TACAGACACA 
ATGCCGATCA TCTGGAAGGT CTTCTCGATG TTCCCACCGT GTCAGCGATC AATGCTCTTC 
TGTTGCCTTC TGGCGGTTCT CCGCTTATAA CTCCTTCCAC CTACACCCAC CTCTTAAAAG 
CTCTTACTAC TTCTGCTCGT GGTTCTGCCA AAGTGTCAAT TGCTTTGCTG GAAGCCGGAA 
TGGTCAACTC GATCTATCAA ATTCTCACTG GTGTTCTTCC TTCTTCTAGC GAAGAAGGTG 
AGCACGGCGA TTCTTCAAAT GCCCAAGGTC TGGCTGGAAG TATTACCGAT ATGGCAGTGC 
TCCAAAACCT TTCTCACCGA CCGAAAGAAC AAGTAGAGGA AGCGTTAGCG CTCATTTGCG 
AGCTTTTGCC CCCTGTACCC AAGGACGGAG TCTTTGATGC CAAGGCCTAT AGCGAAAAGA 
ATCTGCAAAG GGTCAAAAAG GGCCGCAAAT CGGATAGTCC GTCGGATAGG CCGAGAAGGA 
GCAGTCGAGT GGCGGAAGCG TCCTCTAGCA CTAACACTGC TGGACCCAGT ACTCCAGTTG 
CCCTCAATAA AGACTCATCC GATCGTAGCC CGAGCGATCT AATCTCTGCA CTGCAAGCCA 
ATCGCGAGGC TGCTGCTCAA AGAGCTCGCA AAGACGCTGA AACCCAGATG CAATTGCGCT 
GCGACCTCTG CCAGAGTAAC ACCGAGCTCA TTGGGCAATT TATCAAGACA GTCTTACCAG 
TGCTGGTTGA TGTCTATGCG GCTTCCGTGG TATTAAGAGT ACGAACAAAG GTACTTGTCG 
GTTTGGTGAA GGCAGTGTCG TTTGCCCCAG AGGAGCAACT GAACGTAACA CTCAAGTATG 
TTCCAATGGC CAGTTTCCTC TGTGCTATCA TCTCTTCCAA GGACAATGAT GCTTTTGTCC 
TTCACGCTTT GCAAATTGTT GAGCTACTTG TGACCAAGCT CCCTGATATA TATCAGGTGT 
CGTTCTTGCG AGAAGGTGTG GTGTATGAAA TTGAAGCCCT AGCCAATTCA GAAACGAAAA 
AAGAAAAGGC TGCAAAGGAG GCTACCAAGA ACAAGGCTGG CGAGGTCGAT AATGCGGATT 
CCAGGCCTGC TACGCCGTCC AATCCTCCTG GCGCTTCTGA AATCCCCGGC GATCTCAGAT 
CACTTCTGAC TCTTTCCGGT GTCAGCAATC AAATCCTTTT CGGTCAAACC TCTGGTCAAT 
CGACTCCCAG GAAGTCCAGC TCCCACCTAG ACCCCCATGA TGCCAATATC ATTCGTGCTC 
GTATGCTTAT GGCCAAGAAG ATCTTTGACA CCGGTGGCGA CAACCAGAAA GCGGCCTCCA 
AGGTACTGGC AAATATCAGT GACTTGGTGA AGAGGCTTTG TGAGCCAGGA GCATCTGAAG 
CAGATTTGAG AGAGGCCCTG AGAGAAACAG CATCACAGTT TTCAAGTGTC GAACAAAGTC 
TGTCCAGCTT CGAGCTTCTT CAGAGTGGTT TAGTGGACGG TCTCCTTGAT TTTGTGAAAA 
TCCAGGGTCA AGTATCCCCC GCCGACAGGC AGGCAATGCT CTTTGATATA TTCTCTGATA 
AGTCCTTTTC CAACCCGAAT CCTTTGACGA TTCTTGTGAA GCGTCTCCAC GAAAGTCTCG 
GTCGATTGGA GAGTTTTGAT GTGGAGACTG CTTTTGGAGG GGGTTCCGAT CCTTCCCGCC 
CCTCAACCTC AAGTGTACAT CGCACGATGC GGATTCGACT CGTGGCAGAT GAGGGCGAAG 
ATATTCCTAA AAACGTCAGT CAGTTAGTCA TTACCATCCA GGCTATTGCT TCTATTAAAA 
GCGTCCATGA CTATTTGAGG CCGCGCATTG CGGATGGGAA TTTTGGCTCC GGATTTTCGC 
AAATGTTTGC GGCATACGCG GCAGGCAGGT CAGGTGGTGC CCCTGGGTCA AGCACATCGA 
GACTTCTCAA CGCTCTTGCC GGCAACCCTG GCAGTGGTGC CTCACCCGGT TCTCATGCTG 
CTGCTCCGTC TGTCCCAGCA CGAGCGAGCA GCAATGCTGA ATCGGGCCCA TCTGGTGGCA 
GATCGCCACA ACGACGCCGC AGTGCCCGGC TTAATCCCCC TGGTGATGCT GAGTCTGCCG 
CCGATGAAGC ACCAACGGCT GCAGCGAGGG TGACGTCTCC GTCCTCGTCT ACCCTTCTTT 
CGCCTACTAC ATTGACCACT TCTGAGCGGA GGCCCATCCT GCCAGCTATG TCCATGGGAA 
TGGATTTTGA TGATGAAGAG GACTACTCGG AGGATGAGTA CGACGCCCCT GTGAGTTATG 
ACCATGCATA TTCGATATAT TCAGAGCTAA TTTGGTGCAG GTGATCGATC AAGTCATGGA 
GGAAGATCTT GCTGCTACAG GACCCAGCGA AAGTGTTGTT AATATGGACG TTACTGCCGA 
CGGGTCTCGT GTTGAGGCCA AGACACCTCA AGGCACTCGC ATCGCCACTC CGCAACAGAA 
TATTCCAGTC ACTGGGCCAT CCACTGCTAC CTTCAGCCGC ATTGCTCCAT CGCGATCTAG 
TTCTTACGCT GGAGCTTTGA AAACGGAGCC TACTGATTGG CACCTCGAAT TTTTCCTTAA 
TGGTGAAAAG CTTGATATCC ATGACACCAT CTACGGAGCA ATCTACAAGC ATAAACATGC 
TACTGGTCTC AGCGGCGTGA ATGACTTTGT AACAACCCCA GTCATCAAAT TTAGGAAAGT 
TGAAGGTCCA CTTCCAACAA AGGAAACTGT TGCTGAGCGT TCATCGACAA CTGCCTCGAG 
TCCCCTTCCA TCTACATTCG AGCCATCCGT ATCTTCGACT TCGAAGATTT TACATCTTTT 
ACGGGTCGTA CACGATTTGT CCATTGATGG ACGCGATAAC TTAGGTGACG TGAAAGGCTC 
CTTGGACGAG AATCTGTTTG TGAACAACAA ATTAACTGCA AAGTTGACGA GACAACTCGA 
AGAGATTCTC ATCATCGCCA GCAACTGTCT TCCTACATGG GCTATCGATT TGCCGAAGCA 
CTTCTCCTTC CTGTTCCCTT TTGACACGCG CTATAACTTC TTACAGCTTA CCTCATTTGG 
CTTCCCTCGT CTTCTTCTCA AAGTTCAACA GTCGAGCCGA TCGCGGGACG ACATGCCAAA 
TATCGCCAAT CTTCTTCGTC GTAAGGTGCG AATTTCAAGA ACACAGCTCT TAGAATCTTG 
TGCCAAGGTT ATGGAGATGT ACGCCACGTT TCCTGGAACC CTTGAAGTGG AGTACTTTGA 
TGAGATAGGG ACTGGTCTTG GTCCTACCTT AGAGTTTTAT GCTCTTGCTT CCAAAGAATT 
CGCCAGGAGG AATCTTCACG TGTGGAGAGA TGAAGATCCT AGCATTGCGG GCAACTATGT 
TCACCATCCT CACGGCCTTT TCCCCTCTCC TCTTCCTCGT GCTTCTGCTG AACTCGTGGC 
ATCTCGTCTC AAGTGGTTCA AGACGCTCGG TCAATTTATC GGTCGCTCCA TGCTTGATAG 
CAGGATAATC GACATCAGTT TTAACAAGGT TTTCTTGAAG CTGTTGCTAG ACAAACCGAT 
CAAGAAGAAT CTGTCGACCC TAAGGGCGGT TGATCCCTCG CTTGCCCGAT CGTTAGAGAG 
GCTGCAAGGG TATTACTGTG TCAGGAAGGA GATTGAAGCG CTTCCTATTC CTGCTTCTTC 
CCGACGGACA AAACTGGCTG CGTTGACCGT TGGCGACGCG AAACTTGCAG ACCTTGCGCT 
CGATTTCACT CTTCCTGGTT ATGATATCGA GCTCAAGCCC GGTGGTGCGC ATATTGAGGT 
GGACGACAGC AATCTAGGTG AATATCTGGA AAAGGTACTG GATTGGACTT TAGGGTCCGG 
TGTGGCCGAA CAAGTGAAAG CATTCCAAGA TGGTAGGTCA AAATCATTGT CTGCTTCTGT 
TTTGTGTACT GAAAACGGTG ATTGCAGGCT TCTCATCTAT CTTCCCCATA AAGAGCATCA 
AGATATTTTC ACTTGATGAG CTTTATCTGT TATTTGGCAA CGCCGATGAA GATTGGTCCC 
GCGAGAGTAA GCCCTTCATA CTTATATCTG TCTCAACACC ACGCTGACGT TATAAAAGCA 
CTCGAGGTGG CCATCAAAGC TGACCATGGG TACAACCAAG ATAGTCGGGC TGTGCAGAAT 
TTGATCGAGG TCATGTCCTC GTATAATAAA GAGCAACGAC GGCAATTTCT CCAATTGTAA 
GTTGCCGCCT AGTTGTCACG CGGAGACAAG AAATTATTTT CTGACGCTCG ATTACAGCAT 
GACTGGTGCA CCCAAATTAC CCATCGGCGG TTTTAGAGGT CTCACTCCGC CGTTCACTGT 
GGTTCGAAAA CCTCACGAGC CTCCCTACAA GGCCGATGAT TATCTTCCTA GCGTAATGAC 
CTGTGCTCTG GTGAGTTAAA AAAGTCCTTT TGCTATGGTG GGGAGGTGCT AATCCGGTTT 
CAGTACCTGA AAATGCCGGA TTACTCTAGC AAAGAGGTCC TGGCTGCTCA ATTTGAACGA 
GCAATGAGGG ATGGCAGGGG ATCTTTCCTA CTATCATAGA AAACTCACAG CAAATTTCAT 
ATTCATATCA TTTCACTGCC ATAGCATTAC AGCAATTCAT CACTTGTTGC GCTCTCGACG 
ATCGATCATT GGGGCGTGGC CTTCTTTCCA TTTTCTATTT TCCGCCTGCA AAACTTCTCC 
TTCTGTATCG TAGAATCTCC CGTATCTGAT GTACTGAGTC TGAGATATTA 

 

Protein sequence

MHNQGLPSYP EWIKVGPVNV TIATATTTFQ FIDTWPRNRS QRQKARYSAV ILRGDTSNEK 
AKAPITHQRS AARHLVSDEY DDEDDSLWID EPEGDVTVAE ESDMADDYDH EEDDEDDEDG 
DGDENGDNDG PGGGFGNSAY DRLARLASES GVNLDDATAA LFGSGFRAFG GVSSGLSNRL 
RRLKKKLHSK RIATRLAALR ECSELLLVSN EDTLGGTFSP TSFATEFVAI LDGRPNIEEG 
ESDEEESVYD DMDEDAQLAA ALALSSGDAP GTDGEEDEME CQLVACRCLA HLMEALPGCG 
HALVQIGAVP ILCSKLTEIS YIELAEQTLS TLEKISAEYP SAVVREGGLG ALLNFLPFFS 
TNVQRTAVTA AANCCRNISS EHFSKIKEVF PILRDTLSSG DPRLVEQATL AIVRTTESYR 
HNADHLEGLL DVPTVSAINA LLLPSGGSPL ITPSTYTHLL KALTTSARGS AKVSIALLEA 
GMVNSIYQIL TGVLPSSSEE GEHGDSSNAQ GLAGSITDMA VLQNLSHRPK EQVEEALALI 
CELLPPVPKD GVFDAKAYSE KNLQRVKKGR KSDSPSDRPR RSSRVAEASS STNTAGPSTP 
VALNKDSSDR SPSDLISALQ ANREAAAQRA RKDAETQMQL RCDLCQSNTE LIGQFIKTVL 
PVLVDVYAAS VVLRVRTKVL VGLVKAVSFA PEEQLNVTLK YVPMASFLCA IISSKDNDAF 
VLHALQIVEL LVTKLPDIYQ VSFLREGVVY EIEALANSET KKEKAAKEAT KNKAGEVDNA 
DSRPATPSNP PGASEIPGDL RSLLTLSGVS NQILFGQTSG QSTPRKSSSH LDPHDANIIR 
ARMLMAKKIF DTGGDNQKAA SKVLANISDL VKRLCEPGAS EADLREALRE TASQFSSVEQ 
SLSSFELLQS GLVDGLLDFV KIQGQVSPAD RQAMLFDIFS DKSFSNPNPL TILVKRLHES 
LGRLESFDVE TAFGGGSDPS RPSTSSVHRT MRIRLVADEG EDIPKNVSQL VITIQAIASI 
KSVHDYLRPR IADGNFGSGF SQMFAAYAAG RSGGAPGSST SRLLNALAGN PGSGASPGSH 
AAAPSVPARA SSNAESGPSG GRSPQRRRSA RLNPPGDAES AADEAPTAAA RVTSPSSSTL 
LSPTTLTTSE RRPILPAMSM GMDFDDEEDY SEDEYDAPVI DQVMEEDLAA TGPSESVVNM 
DVTADGSRVE AKTPQGTRIA TPQQNIPVTG PSTATFSRIA PSRSSSYAGA LKTEPTDWHL 
EFFLNGEKLD IHDTIYGAIY KHKHATGLSG VNDFVTTPVI KFRKVEGPLP TKETVAERSS 
TTASSPLPST FEPSVSSTSK ILHLLRVVHD LSIDGRDNLG DVKGSLDENL FVNNKLTAKL 
TRQLEEILII ASNCLPTWAI DLPKHFSFLF PFDTRYNFLQ LTSFGFPRLL LKVQQSSRSR 
DDMPNIANLL RRKVRISRTQ LLESCAKVME MYATFPGTLE VEYFDEIGTG LGPTLEFYAL 
ASKEFARRNL HVWRDEDPSI AGNYVHHPHG LFPSPLPRAS AELVASRLKW FKTLGQFIGR 
SMLDSRIIDI SFNKVFLKLL LDKPIKKNLS TLRAVDPSLA RSLERLQGYY CVRKEIEALP 
IPASSRRTKL AALTVGDAKL ADLALDFTLP GYDIELKPGG AHIEVDDSNL GEYLEKVLDW 
TLGSGVAEQV KAFQDGFSSI FPIKSIKIFS LDELYLLFGN ADEDWSRETL EVAIKADHGY 
NQDSRAVQNL IEVMSSYNKE QRRQFLQFMT GAPKLPIGGF RGLTPPFTVV RKPHEPPYKA 
DDYLPSVMTC ALYLKMPDYS SKEVLAAQFE RAMRDGRGSF LLS