Gene CND03590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND03590 
Symbol 
ID3257228 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand
Start bp987147 
End bp988785 
Gene Length1639 bp 
Protein Length374 aa 
Translation table 
GC content45% 
IMG OID638256292 
Productenzyme regulator, putative 
Protein accessionXP_570198 
Protein GI58266084 
COG category[S] Function unknown 
COG ID[COG4886] Leucine-rich repeat (LRR) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.733317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACGTACTTCT TTGTATTCCA GCTCTTCCTT TTACGCTTGC ATTCTTGTGC AGACTATCCA 
CAGTGTTACC AATCCCGTCG ATGGACCAGC AGCAAGTATC GCCGAGTATC TCATCAGACG
TCCAGCAATC GGCGAACCAG CATGTGCCTT CCCAGGCCAA GCCTCGGGCA AGGTTAGGCC
CCACCGAGGT AGTCCAACTT CCGGCGTCAG ACTCAGAGCC CGACGATGAG GACGGGAACA
ATCAGGAGAC AGATGCAGGG GGAGACGGGA GTCCCGACTT CTTAAAAGAT TATCCAGAAG
ATACAGAGGT GGGATCAGCG CTCGTAGCGT ACCAGCACGT ATCAGATGCT AAAGGAGACA
TAGGATCTTC AACTCTTGCA TCTCCGCTTG AAAACACCTC TACTCGTACC TCTCAACTTT
CCGAGGTTTG GGAACCATTT GAAAAGGCTA TGTCTGCGTC AAAACGAGCT TACTTCACCC
CTGCCATCAG GCGCTTTTGC CAACTTGACA GAGTTAGAAG AGCTGGATTT CTATGATAAT
AGACTCGGAC CTCACGTGAG GGATGAGGAG TTGGCTGGAT GCCCCAATAT TAGGTATGTT
CAGGGACATT TGCGCAGGAT CGCAGAAGCT AAAAATGCCT TTCAGTACAC TGGATCTCAG
CTTTAATAAC ATTCGGCATG CACCCTCCCT CCCCAGCCTG CAACATGTGA ATACGTTGTA
TCTGGTTCAA AACAAAATAT CTAGGTTAGA AAAAGGCGAG CTCGATTGGT GTCAAGACAC
AATGAAAAGC TTAGAGCTAG GGGGTAACAG GATTAGGGTC ATCGAGAATC TCGACAAATT
GATACATCTG CAGGAACTGT GGCTGGGGAA GAATAAGATC CGCGTGCTTG AGGTTAGGCC
AGAATTTGCT CAGTTACTTT GTCGTGCTGA CCAGAAATAT CCAGAATCTG TCCACATTCT
CTTCTTTACG CATTCTTTCT TTGCAATCAA ATCGCATCAC CAAATTGGAG AATTTAGAGG
GACTGGTCAA TCTTGAAGAA TTGTATCTAT CCCATAACGG CTTGCAAAAG ATTGAGGGTT
TACATCATAA TGTATGTCCT TGTTCGTTAT CATATTTTTG ATGCTCACGC GATGTTTCAA
ATGATCTGCT TAATAGATCA AGTTGACTAC ACTGGATGTC GGTAACAATT TCATAAAAGA
GATTGAAAAT CTGTCGCATC TATCAAATCT GGAAGAGTTT TGGGTATGTC TATATCACCT
TGCGTTCTAA TGACGATCAA ATGCTCATCC ATTCCAGGCA AGTAATAATC AAATCGGCAG
TCTCCATGCA CTGGAATCTG AACTTCGTCC CCTAACTAAC CTCTGCACTA TTTACCTTGA
AGGAAACCCA TGCCAGAAGG AAGATATGGG CAACTATAGG CGAAAGATCA TGTTGGCCTT
ACCCCAAGTC AAACAAATTG ATGCGACGTG AGTGACAGTC AATTCAATAA AAGAACTTGC
GATGCTGACG GAAATGGCTT TGGGACAGGT ATGTGAAAGC TTGAACGAGA GGCTATTGAA
TATGGCCCTC TAAGGTGAAA ACATGACCAT AAACGAGGTA GCATTCCATT GTAGTCATTG
TACAGAACGA TACATCAGG
 
Protein sequence
MDQQQVSPSI SSDVQQSANQ HVPSQAKPRA RLGPTEVVQL PASDSEPDDE DGNNQETDAG 
GDGSPDFLKD YPEDTEDLQL LHLRLKTPLL VPLNFPRFGN HLKRLCLRQN ELTSPLPSGA
FANLTELEEL DFYDNRLGPH VRDEELAGCP NISTLDLSFN NIRHAPSLPS LQHVNTLYLV
QNKISRLEKG ELDWCQDTMK SLELGGNRIR VIENLDKLIH LQELWLGKNK IRVLENLSTF
SSLRILSLQS NRITKLENLE GLVNLEELYL SHNGLQKIEG LHHNIKLTTL DVGNNFIKEI
ENLSHLSNLE EFWASNNQIG SLHALESELR PLTNLCTIYL EGNPCQKEDM GNYRRKIMLA
LPQVKQIDAT YVKA