Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND03150 |
Symbol | |
ID | 3257244 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | + |
Start bp | 851911 |
End bp | 852897 |
Gene Length | 987 bp |
Protein Length | 224 aa |
Translation table | |
GC content | 47% |
IMG OID | 638256249 |
Product | hypothetical protein |
Protein accession | XP_570182 |
Protein GI | 58266052 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5143] Synaptobrevin/VAMP-like protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCCGGT CAACTACAAT CTTCAGGGTT CACGACGCTC TCCCTCTCGC AGCTAGTGTA GACGACGAAT CAGTCAGTCC TCCCTCGTGT CCACATCGTA CCTCTGCTTC TTCTGACTTG GCTGCCATTA GACCGAGAAA GCTTTGACGG AATACAAGCA GCAATCAAAG CTTATATTCA GACGTCTCAA TGCAAACTCT GAGCCTGCTT GCTCCATTGA ATCTGGTGCT TACACCCTTC AGTGCGTGTG TTTCCTTACA GCATCATCCC ATCTCGCATA GTGCCTCATC TCATAAGTAC CTATTAGCTA CCTCATAGTC GACAAGGTTA TTTATATGTG TATATGCGAC AACTCCTATC CGAGAAAGCT GGCCTTTTCA TACCTTGATG AGCTGTCAAA AGAATTCCAG CGCAGCTATG GGGATAAGAT CGACGGGGCA ACTAGACCGT ATGCGTTTAT GGGCTTCGGT GGGTTTCTCA TCCAAATAAT CTCACATGAC CTAACCAACA CCTTTTTTGT AGATACATTC ATTGGCAAGA CAACCAGGCT GTACCGCGAT TCACGCTCCC TTACTCAAGG GGGAGGCCCT GCCGCACCTA ATTCGCGACT TGACCAACTC AATGAAAACC TCAAGGATGT GACTCAAATC ATGACTAAGA ATATGGAGGA TTTGCTTTGG AGAGGAGACA GCCTTGATCG TGAGTCATTC TTGCCATACC GGGCCATATT TATTCCTAAC AGCTGTATGC AGGGATGTCA CAGCTCTCCA CCTCCCTGCG ATCAGAGTCA GCCAAGTACC GCAAAGCGGC CCGAAACATT AATCTTGAAG CACTCATTCG TAAATGGGCG CCAATAGGGG GAATTGCCTT TTTCATCATC TTGTTCATAT GGTGGCGGTT CTTCTGATCA TTCCTGGCGA ATTATAACAA TCAAAGCAAT ACGATGCGAG CAGGGAGGCT ACTTACAACA TTCCATGTAA TACATAG
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Protein sequence | MVRSTTIFRV HDALPLAASV DDESTEKALT EYKQQSKLIF RRLNANSEPA CSIESGAYTL HYLIVDKVIY MCICDNSYPR KLAFSYLDEL SKEFQRSYGD KIDGATRPYA FMGFDTFIGK TTRLYRDSRS LTQGGGPAAP NSRLDQLNEN LKDVTQIMTK NMEDLLWRGD SLDRMSQLST SLRSESAKYR KAARNINLEA LIRKWAPIGG IAFFIILFIW WRFF
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