| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND03140 |
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| Symbol | |
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| ID | 3257411 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006686 |
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| Strand | - |
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| Start bp | 845850 |
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| End bp | 851707 |
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| Gene Length | 5858 bp |
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| Protein Length | 1727 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638256248 |
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| Product | conserved hypothetical protein |
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| Protein accession | XP_570516 |
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| Protein GI | 58266720 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTTGAATATC TATATCCTTC TCCAAAAAGC GACGGGCCCC TTCATCTTAC TCGCTCGTCG
CACACTATAC ACCATGGACA TCTCGCACTC AATTCATTCC GAAGTATCCT CCCTCTCTTT
TTCCTTCCTC TCCGCAGATG ACATCAAAGC CATCTCGGTC AAAAAGGTTG ACAACCCTAT
CTTGCTTGAC AACCTCAATC TCCCTACCAG AGGTGGTCTG TATGACCCCA AACTTGGCCC
CATGGGCTCT AGAGACCTGT GAGTTTGTCT GAACTGTACT GCATCATTTT TTGCTCATTT
ATCGTCTCGT AGGTGTGAAA CATGTCACCT TTCATACTTT GCCTGTCCCG GTCATTTTGG
CCACATTGAG CTCCCCACGC CAGTATATCA CCCGTTATTT ATGAACCAGT GCTATCACTT
GTTGCGTGGC GTGTGTCTCT ACTGCCATCA TTTTAAAATG CCCGAGATTG TCGTAAGTCC
AACTCTTCGT ACATACTCCC TTCACAGTTC AGGGCTCATG TAAGTTAGGC CACTTCCTAC
GTTGCTCGTC TCCGTCTCTT GGACGCCGGC CTCCTGACGG AGTCACACGA AGTCGCTGCT
CTTTTCGACA ACGCTATTGG AAAATCTTCG CGCCACAGGG ATACCGATGA AGACGAGGAT
GCGGAAGGTG ACGTTGATAT GGATGCCCCG GCTCCTCAGA CCATTGAATC CGCAGCCGAG
TTCATGGTTA GAATCGAGGC TTACGTTTAT CATCATCTCA AACTGGCCAA GCAAAATGCA
GGAGGCAGCG ACAGCAAAGT GGAGGACGGT TACAAAGACG GCCTCGTCTT TGAAGAACGG
AAAAAGTTGC TGCACGAATT CGGGAAAAAG ATCTGGAACA GGTGTACTCG ATGTACCGCG
TAAGTTGGAC GCTTTCTGAT CATGTCATTG TTCGCTGACA CATCATAAGT TATGGTAACA
CCTTCCGTAA AGAAAAGGCC ATTAAAATCA TTGAGTACGA TCTCACTCCA AAGCAAAAAC
TCGCCAATAA ATTGTCCAAT CTTCGTCGCC CCGATGTCTT GGCTGCTTCT GGCAAATATT
CATCCAAGCA ACGACGTTCG GAGGGTGATA TCGACGAAGG TATCGAAATG GACAGCGACA
AGTCCAGCGT TTCTGAAGGA GAAGGCGAGT CCTTGGATGA AGAAGAAGAA GAGGAGCAAG
ACGTTGGGCA AACAGTGGCC AAAACTGCAA GTGGTCAAGT CAAGGGTACT CGAGGTCGTC
ACGAGCGTGT CATGTCTCCT GCGGAAGTCC GTGCCCATCT TCGTCTTCTT TTTGATAAGG
AGCCCAGAAT TTGTCGCTTG ATCTATGGCA GACATGGCAA CCCGGCAGCC CTTTCCTCCG
TTGCCCCTCC CCCTCTTGCA GACATGTTTT TCATGGAAGT GGTCCCGGTC ACTCCTACTC
GTTTCCGACC TGCTGCCAGA ATGGGTGACG AACTTTTTGA GAACAGCCAG AACTCTCTTC
TCACGGCGGT TTTGAGTACC TGTCAACGAA TTCAAAAGCT CAATCAAGAT CTGATCAATC
AAGCTAAGGC GGAGCGAGGC GAGCATGTCC TTGATGCCGT AGCTAAAGCC CAAGGCGGGC
GGACGTTTGA GCTCTTGCTT GAGGCTTTAA TCAAGCTCCA GCACGATGTT AACAGTTTTG
TTGACAGCAC TAAAAATCCG GCAGTCATGA GGCAGGGTAA GTTGCCACCA CCTGGTGTCA
AGCAGCTTTT GGAGAAGAAG GAGGGTTTGT TCAGGAAACA TATGATGGTA AGTGATTCCA
CCTGTTTCAA ATGAGTATCG TATTAACATC ATGCAGGGCA AGCGAGTCAA CTATGCCGCC
CGATCTGTCA TATCTCCCGA CATCAATATC GAAACCAACG AAATCGGTAT CCCTCCTGTC
TTCGCAAAGA AGCTCACGTA TCCCGAACCT GTTACTCAAC AGAATGTCGC TGAACTCCGT
CAACTTGTAA TCAATGGTCC TAAAATTCAT CCTGGTGCAG CCCTTGTTCA GAACGAGGAT
GGTACCCAGA TTTCTCTCGA TAAATTGACT CTCGACCAAA GAATTTCTCT CGCTAACCAG
CTGTTGACGC CTCAAGGGAG CGAAGACAAC ATTGGAGCCG CCAGTATTGG CCCAGCTGCT
AAGAACAAAA AGGTGTACAG GCATATCAGG GACGGTGACA TCGTCATTCT CAACCGACAA
CCAACTCTGC ACAAGCCTTC AATGATGTGC CATCGCGTCA AAGTCCTGTT GGGAGAGAAA
ACGATCAGAA TGCACTATGC CAACTGGTAA GGTTAACAGC ATTTTTGAGT GACTCTATCT
GACCTTGATT TAGTAATTCG TACAATGCGG ATTTTGATGG CGACGAGATG AACATTCACT
TCCCTCGTAA GTTTCCTTTT CCTTAAATGA TATGCCATTA CTGACAACCT TATTCAGAAA
ACGAAGTCGC TAGAGCTGAA GCTCAGATGA TCGCCAATAC CGATAATCAA TACTTGGTTC
CCACATCTGG TGGTCCTCTT CGAGGTCTTA TTCAAGACCA CGTCGTGGCT GGTGTATGGA
TGTGCAACAA ATCTTCCTTT TTCACACGAG AGCAATATTT CCAGCTCATT TATGGTGCCC
TTCGTACCGA AAACAACTAC ACTGGTCGAT CTCGCATAAT CACCCTTCCT CCCGCCATCT
TCAAGCCCAA GCCCCTTTGG ACCGGTAAAC AGATCATGTC TACTATTCTC ACCAACCTTA
CTCCTTCCAA TGCTAAGGGT CTTAACCTCA CTTCAAGGAA CAAGGTGCAA AACAAGCTTT
GGAGAAGAGA CGACTCTTCT GATCCTGCGA TGAGTGAGGA GAATGTCATC TTCCTTGACG
GTCATCTAGT CTGCGGTGTT CTCGACAAGT CACAATACGG TGCTTCCGGG TATGGTCTTG
TGCACTCTGT GCATGAGCTG TATGGTCCAT ATATTGCCAA CAGGCTGCTG GGCGTTTTAT
CTCGTCTTTT GACAAAGTAC CTTCAACATG ACGCTTTCTC ATGTAGGATG GATGATTTGA
TTCTCACCGC TGAAGGCGAG AAAATCCGAA AGGATATCCT TGACAAGGCT TCCGGTGATG
GCGCCATAGC GGCCATGAAG TACGTTGGCT TGCCTGAGGG GTCCAAGATT GAAGACCCCG
ATACTGCTAA GAACCTTGCC ATACGATTAG AAGAAATTCT TCGAGATGAT CACCTTATGG
CAGGTCTTGA TGCTGTCATG CAATCCGCTT TCAACAAGAC TACCTCCAAG ATTAACAACG
ACGTTTTGCC CGATCATCTT GTCCGACCTT TCCCCGACAA CAACATGCAA ATGATGACAA
TATCCGGTGC CAAGGGCTCC AAGGTCAACG CCTCTCAAAT CTCTACATTG CTGGGTCAGC
AAGCCCTTGA AGGTCGTCGT GTGCCTACAA TGGTTTCCGG TAAAACCCTT CCGTCCTTCA
AGGCCTTTGA CACCAGCGCC CGGGCGGGTG GATATGTTGC CAACCGATTT TTGACTGGTA
TCCGTCCTCA GGAGTACTAC TTTCATTGTA TGGCTGGTCG AGAAGGCCTT ATCGACACGG
CTGTCAAGAC TAGTCGATCT GGTTATCTCC AGCGATGTTT GATTAAGCAT CTCGAAGGTG
TAAAGGTCCA TTACGATCAC ACCGTACGAG ACAGCGACTC TTCTGTATTA CAGTTCCTCT
ATGGTGAAGA TTCGCTTGAT GTGACCAAGC AGACCCACCT GAACAAGTTC GATTTCGCAG
CCGCCAACCA TCTTTCTTTA CTTAATAAGG TTCGACCAGG AGACATTGCA GGAAAGGTGT
CTGACGAGGC CCTTTCTCAC ATGAAGAAAG CCCTCAAGAA GCCCCACAAG CATGTTCCTG
CTCTTTCCGA ATACTCGCCA TCCCGATATA TTGGTAGCAT GTCCGAGGCT TATGCCAAGA
AGCTGAACAA CTACATCGAA GACAACAAGC TCGGATACAT CACGAAGAAG GGAGAGAGCA
AAGCTAGTCC TTATACGAGC GAAAGAGTTC CAGAGAAAGA GTTTTTGGGC CTGGCTAGAG
CTCGATATAT GAGGAGTTTG GTGGAGCCCG GAGAAGCTGT TGGTTTGTTA GCTAGTCAAG
GTGTCGGTGA ACCATCCACA CAGATGACAT TAAACACTTT CCATTTAGCT GGTGAGAATT
TCGCGCGCGC ACATATCGAG AATAACCAGC TGATATATTT TACAGGTCAC GGTGCTGCCA
ACGTCACCCT TGGTATTCCT CGTCTGCGAG AAATCGTCAT GACTGCCTCC TCCAAACCGA
CCACTCCTAC TATGAAACTT CCTCTACGAG AACACATTTC CGACAAGGAC ATCGAGACTT
TTGTCAAGCA AGTCTCGCGG CTTACTCTTT CCGAAGTTGT GGAGCGGGTT ACTGTCACCG
AACGTCTATC GTCCAAGTCT TCCGAATCCG ACTCTCGTCA GCGTAAATAC ACTGTTCTAC
TTGAGTTCTA CCCCCCCGAA GAGTATGGTA CAGAATACGA GATTACTTCC GAACAACTTC
ACGAAAGTTT GGCTTGGCAT TTTGCTCCTA GACTCAAGAA GGAAATCCAG AACGAGATTA
GGAGAGTAGC CAAGACCAAA GAGCAAGAAG CCCAGGTCGG AAAAGGTCGC AAGGTCCGAG
TTGGTGGTGA CGAAGGGGAC GAGGAGGAAG TTGATAGGGA ACCTGATGTC AGGAGAAGGG
GGCGCGACGA CGAGTTGGAC AACGACGATG AGGACTCCTA TCAACTCAAA CGTGCGGCTC
AAGCCAAGCA ACACGAGTAT GAGGCGGACT CCGATGCCGA TTCTGGCGTT GCAGACCTCG
AGGACTTTGT GGAAAAGGAG CTCGAGGAGG ATGACGAGGA AGATGTGGAA GATGACGCCG
CAGAGAAGGC AAAGAAGGAC CAGAAGGCGG ATGACTGGGC CGAATTGTTC AAGCTTGCTA
GCAAGTATGC GACAACATTC AGCTTTGACG GTCACAGTGG AAAGTCGGCT CAGTTTGACC
TTGAAGTGAG TGGCAGCATC TGCTGTGCAT TACTTGACTA ACCATTGATT ATAGTTCCCT
GCGAGTGCAC CCAAGTTGTT GTTGGTCGAT ATTATTGAGA GAACTTGTCG AGCTTCGGTT
GTTCACGAAA TCGAGAACAT TGGCAGGTGC ATGAAGATTT TCTCCGATAA AGGAGAGTTC
ACGGTGAGTT TCAAGGCTTG TAATTGTAGC CAAGTGCTTT AAGTGCTAAT GACGAGTCAG
CGATCACTCA TTACTGAGGG CTCTAATCTC AGAGGCATGT GGGCCCTCGC TGATGAGCTT
GTCGACCTTG ACAGGCTCTC CTCCAACGAT ATCTACGCGA TCCTTCAAAC TTTCGGTGTC
GAAGCTGCCC GTCGAGCCAT CATTGATGAA GTGTCAAGCG TATTCGGAGC TTATGGTATT
GCTGTTGACT ACAGACATCT AACCATCATC GCCGATTACA TGGTATGTTG AACGTGTTAA
GACGTACCAA ACTTCTCACT GATGTTTTGT TCAGACTCAT GCCGGTGGTT TCAGGCCATT
CAACCGTACT GGTATCTCCG CCAAGTCTTC ACCGTTACTC AAAGCGTCTT TTGAAACAAC
TGTTGCCTTC CTGTCCGAGG CCACCCTCCA CGGTGACTTT GATGACCTGA CGAGCCCCGC
AGCCAAGATT GTGATGGGTA AACCTAGTGC GAGCGGTACT GGTGCTTTTG ACATACGTGC
TCCTACAAGA TTATAGCGAG GGCTGTTTAA TAAGAAAGGA AGCCTTTTAA CTTCGACATT
TGTAAAAGAT TGTGTGCAAT AGATTTTGGT ACATAGTG
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| Protein sequence | MDISHSIHSE VSSLSFSFLS ADDIKAISVK KVDNPILLDN LNLPTRGGLY DPKLGPMGSR
DLCETCHLSY FACPGHFGHI ELPTPVYHPL FMNQCYHLLR GVCLYCHHFK MPEIVATSYV
ARLRLLDAGL LTESHEVAAL FDNAIGKSSR HRDTDEDEDA EGDVDMDAPA PQTIESAAEF
MVRIEAYVYH HLKLAKQNAG GSDSKVEDGY KDGLVFEERK KLLHEFGKKI WNRCTRCTAY
GNTFRKEKAI KIIEYDLTPK QKLANKLSNL RRPDVLAASG KYSSKQRRSE GDIDEGIEMD
SDKSSVSEGE GESLDEEEEE EQDVGQTVAK TASGQVKGTR GRHERVMSPA EVRAHLRLLF
DKEPRICRLI YGRHGNPAAL SSVAPPPLAD MFFMEVVPVT PTRFRPAARM GDELFENSQN
SLLTAVLSTC QRIQKLNQDL INQAKAERGE HVLDAVAKAQ GGRTFELLLE ALIKLQHDVN
SFVDSTKNPA VMRQGKLPPP GVKQLLEKKE GLFRKHMMGK RVNYAARSVI SPDINIETNE
IGIPPVFAKK LTYPEPVTQQ NVAELRQLVI NGPKIHPGAA LVQNEDGTQI SLDKLTLDQR
ISLANQLLTP QGSEDNIGAA SIGPAAKNKK VYRHIRDGDI VILNRQPTLH KPSMMCHRVK
VLLGEKTIRM HYANCNSYNA DFDGDEMNIH FPQNEVARAE AQMIANTDNQ YLVPTSGGPL
RGLIQDHVVA GVWMCNKSSF FTREQYFQLI YGALRTENNY TGRSRIITLP PAIFKPKPLW
TGKQIMSTIL TNLTPSNAKG LNLTSRNKVQ NKLWRRDDSS DPAMSEENVI FLDGHLVCGV
LDKSQYGASG YGLVHSVHEL YGPYIANRLL GVLSRLLTKY LQHDAFSCRM DDLILTAEGE
KIRKDILDKA SGDGAIAAMK YVGLPEGSKI EDPDTAKNLA IRLEEILRDD HLMAGLDAVM
QSAFNKTTSK INNDVLPDHL VRPFPDNNMQ MMTISGAKGS KVNASQISTL LGQQALEGRR
VPTMVSGKTL PSFKAFDTSA RAGGYVANRF LTGIRPQEYY FHCMAGREGL IDTAVKTSRS
GYLQRCLIKH LEGVKVHYDH TVRDSDSSVL QFLYGEDSLD VTKQTHLNKF DFAAANHLSL
LNKVRPGDIA GKVSDEALSH MKKALKKPHK HVPALSEYSP SRYIGSMSEA YAKKLNNYIE
DNKLGYITKK GESKASPYTS ERVPEKEFLG LARARYMRSL VEPGEAVGLL ASQGVGEPST
QMTLNTFHLA GHGAANVTLG IPRLREIVMT ASSKPTTPTM KLPLREHISD KDIETFVKQV
SRLTLSEVVE RVTVTERLSS KSSESDSRQR KYTVLLEFYP PEEYGTEYEI TSEQLHESLA
WHFAPRLKKE IQNEIRRVAK TKEQEAQVGK GRKVRVGGDE GDEEEVDREP DVRRRGRDDE
LDNDDEDSYQ LKRAAQAKQH EYEADSDADS GVADLEDFVE KELEEDDEED VEDDAAEKAK
KDQKADDWAE LFKLASKYAT TFSFDGHSGK SAQFDLEFPA SAPKLLLVDI IERTCRASVV
HEIENIGRCM KIFSDKGEFT RSLITEGSNL RGMWALADEL VDLDRLSSND IYAILQTFGV
EAARRAIIDE VSSVFGAYGI AVDYRHLTII ADYMTHAGGF RPFNRTGISA KSSPLLKASF
ETTVAFLSEA TLHGDFDDLT SPAAKIVMGK PSASGTGAFD IRAPTRL
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