Gene CND03090 details

Gene Information

• Locus tag: CND03090
• ID: 3257390
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006686
• Strand: +
• Start bp: 835930
• End bp: 838204
• Gene Length: 2275 bp
• Protein Length: 522 aa
• GC content: 47%
• IMG OID: 638256243
• Product: hypothetical protein
• Protein accession: XP_570186
• Protein GI: 58266060
• COG category: [S] Function unknown
• COG ID: [COG0391] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.700154
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGAGTACCGA TCTCTGACGG TCGATATAAA AGGGAGTTAC TCTTCTTGCT TGGCCTATGC 
TTCTCTCTGC TTCCTGAAGA AGGTACTGTC CGGCAAGTCC CAGCAAATAT CACCTTGTGG 
CATGACATCT CCCCGATCGT TACCATTTCG CCTACAACCC CCACAAGAGC CAGGACACAT 
ACATGACTGT GCCATCATGG ATTCTCCAGT GCCAGAGTCA CCAACTGCAC GTAAAAATAA 
AGACTTGTCT TATCTCATAA TCTCTGGGGG CACTGGTGCC AATTCGATTG CAGGAGCTTT 
TGGGCGCTCG CCCTCATTCG TCTTGCCAGT TTCCGACGAT GGAGGTTCAT CCTCGGAAAT 
ATTGAGATGT TTTGGGGGAC CCTCGATTGG TGATATTAGT GAGTATATGT CAGCGATTGA 
GTACTAGAGC TTGACTATGT CCAGGATCTC GCCTCATTCG CCTTATCCCC GTCGTGCGCC 
ACCCAGTCAC CAAGGAGGAT AAGGAACGGG CAGCAATCTA CCAGCTTATG GCTTACCGTT 
TTCCTTCCGA TGCCGCTGAG AAGGTCGTAA GGGACATGTG GATGGACATT GTAGAAGGTA 
AAAGTCACTT ATGGAGCGGG ATCGGTGAGG ATAAAAAAGA ATGCATTCGA GGTAAGCCTA 
GAACAACGTT TTATTGGTAT CCGTTGCTGA GACAAAGTAG CATTTTTTGT ACACTTTGAA 
ACCCAATGCT TAAAGCGGGC TCATAAAAGA TTCTCGTTCC GGAATTTCTC TCTGGGCAAT 
GGCTTTCTGA CAGGTGCTAG AGATCTTTTT GGCAGTTTAC CCAGCGCTAT ATTCTTATTC 
AAATCTATTG CAGGAGTGGA GGTAAGTTGA TCTTGCCTGT ACCATCGAAT TCTTGTAAAT 
AACACAATAC AGCATGGAGC TCAGGTCATC CCTGTAATCA ACACAAATCG TAAGATGCAT 
TGGGGATCAT CACTATCATG ATTAACAAAG TTCAACTAGA AACGGTCACT ATCGCAGCTC 
AGCTTGCCAA TTCGACAACT CTTGTAGGCC AATGTGCCAT ATCCCACCCT AGACCCTCCG 
CCTCTCAGGA TAGCTCTATG TCCACTCCTC TGCACGGGTT GAGCTCCGCC ACCCTTCCTT 
CCATCCATCC CTTTTTACGG ATTCATTTCA GAAGAGACTC TAGGACATTT GATACTCCTG 
ATGAGTCGGC ACCGCCTACA CGATCGCATA GTAGCGATCG GTTAGAAGCA ACCACTAGTG 
GTGCAGAGGG GCACGACGGC GAGGGGAATT TGGCATACCG AAAAGGGGAA GATGAAGCGC 
CTCTTGAGGC CAAGATCGAA AGGATATTCT ACATCAACCT CTATGGACAG GTGGGCATGA 
ATCCCTTTGA GCACACCAGA AGCTGACGGA CTCTGTAACC CAGGAAATCT ACCCCGAACC 
AAATACCGAT TACATTAATG CGATTCAAAA CCGGGACATC CTCGTTTACT CTTGCGGCTC 
CCTGTGGACT TCTATTGTTC CATGTTTAGC ACTAAAGGGG CTGGCAGAGC AAATAGCCAG 
ATCCCAAACT CTCAAAGCCA AGGTTCTCTT ACGTAGGTAG AACCGAATCC AACAACTGGC 
AGTTAATTAA TCGTTACACG TAGTTAACTC TTCTAATGAC CGCGAGACAA CAGGTTATGC 
TGCTTCAGAA TATGTAGCAA CCATCCTTGC GATGCTTCGT CATTATGACA AACCTAAACG 
GAATCGAACA AGAGAGCAAT TATTGCCAGG ACCAGAATGG AAAGCAGCTA ATTTGATCTC 
GCATGTGGTT TGGCTGGAAG GAGCAAAAAT CGAAATCGAC GAGGATCAAA TTCTGGTAAG 
TCAAAAGTGG AAATGTATCA ATTCTAGTGT TTGGCTTATC AAAACGAACT GTCCAACGTA 
GGAATCGGGT GTGAAGATGG TATGCGTACC GGCAAGTGTA CACGGGGCCC AACACGGGGA 
AATCCCCTTG TTTAGTAACG AGGCAGTTGA ATGGGCCATG GAAAGAGTGT TGGAAGATGT 
CAATCATAAT GCTTAGAAGG TATACGGTTA TTCTCAAGAC CACGCTTAGA ATTATAAAGT 
ATATTTCAAG CTATTGTACT CCGCTAGTCT GTGATCTTTA GCCTCGCCCG CCCGCATTAC 
ATGGGTAACA GGCTCGTTTC CGTACACACA TTCCACAATG ATGGAAAGGA AGACCCCATT 
CTTCGACCAT GCTACGTATT TTGTGAAGCA AACATGTCCT AAAATGCAAT AGAAG 

 

Protein sequence

MTSPRSLPFR LQPPQEPGHI HDCAIMDSPV PESPTARKNK DLSYLIISGG TGANSIAGAF 
GRSPSFVLPV SDDGGSSSEI LRCFGGPSIG DIRSRLIRLI PVVRHPVTKE DKERAAIYQL 
MAYRFPSDAA EKVVRDMWMD IVEGKSHLWS GIGEDKKECI RAFFVHFETQ CLKRAHKRFS 
FRNFSLGNGF LTGARDLFGS LPSAIFLFKS IAGVEHGAQV IPVINTNQTV TIAAQLANST 
TLVGQCAISH PRPSASQDSS MSTPLHGLSS ATLPSIHPFL RIHFRRDSRT FDTPDESAPP 
TRSHSSDRLE ATTSGAEGHD GEGNLAYRKG EDEAPLEAKI ERIFYINLYG QEIYPEPNTD 
YINAIQNRDI LVYSCGSLWT SIVPCLALKG LAEQIARSQT LKAKVLLLNS SNDRETTGYA 
ASEYVATILA MLRHYDKPKR NRTREQLLPG PEWKAANLIS HVVWLEGAKI EIDEDQILES 
GVKMVCVPAS VHGAQHGEIP LFSNEAVEWA MERVLEDVNH NA