| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND03000 |
|---|
| Symbol | |
|---|
| ID | 3257051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006686 |
|---|
| Strand | - |
|---|
| Start bp | 810668 |
|---|
| End bp | 815132 |
|---|
| Gene Length | 4465 bp |
|---|
| Protein Length | 1078 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | 638256234 |
|---|
| Product | conjugation with cellular fusion-related protein, putative |
|---|
| Protein accession | XP_570196 |
|---|
| Protein GI | 58266080 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2966] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTACGCGATT GCTACCCTGT AATAGCAGTG TGCTTTCGTC TTCATCTTTC ATCTTTCATC
TTTCATCTTG TCCTCAACAA CTGTTCTGTC CTATACACCC TTCAGCGTGA ATCGTCTCCC
TCTAGGGTTC ACCATATCAT CCCCACACAC TCATTTCCGT ACTCGGACGT CCTATCTCAT
CGCGGCACCC TGTTAGCTGT GCTACGGCAC CCGGCACACA CAGCCTTTCC CACTCCACGA
CTCACGTTTG TCATCGACTA TTACATAGGG CGAATCGCGG TCCAGACCAT TCTCTCATAA
CACACAGCAT AGTTTGTATT CACAGCTACA AGCACAAGCC AGCCAATTTT TTCATCGACA
TTACGAGCAG GTCTAAACGT GTAAGTGCGC AGTAACACTT TTCTGTTCGT TCGCGAGCAT
TCATCAGGCC TCGACTTCAG TATCTACTCT AGATGCCAAC TGATCTTTGC TATAGCCTGT
CACAATCATT GTATATTCTT ATTATCTTTT CTGAATCCAC TCGTGACTCG CCCGCGATCC
GTGTATCCCT GTAGACATTT GCGTTGCTTT CTTCATTCAC AGACAGCTTT ATCGAACGCG
TGACAGGCTA CCCGAATCTT TCTTGGCACT GCTCTTCATC CAACCATGTC TATTCCCGAC
AATCCCTTCC AGCCTCCTAC AGACACATCG CCACCGACTT TACAGCTGGA GGCCACCAGT
CACGACGATG GCCAGTCTAT CAAATCGGGT ATCAATGGCA GTCCCATGCC CGCGGGTTCT
CCTCATTCCC ATCTTTCTCC TCCATCTGAG ATAGCCTCTC CGCGTCCAGT GTTATCGAAT
CTTCAACACT TGGGTCCAGG TGTCAAAACT CCGCGACGCG TACAATGGAC GTCTGATCCC
CATATCGTCC AGCTTCAACC TGTAGAGCCC GCCCCAGGTT CTCCGCAGAC TCTCGATCCC
AGTAATATCG ACGAATTCCG GGACGCGTTA GAAAGGCACA GATCTGGAGG TGCCGGAAGA
CGTCCCCCTA GTCAGCTTAG CAGACAAAGC AGTGCAAGTG GAAGCGTTAC GCGCCATGGA
ACAGACGACG AAGAAGATTA TGACTATCGA ACTGATGTTG ATCCTCCTCA GCGCCCAGAC
ATCGAGAGGC ACGATACCGA TGAAACAATG TACGAATCAA ATCTCATTGA TAACGGTATG
CGTGGTCATG TCTCTCAGTA TATCGCACCA GGAGAAACAG ACGGACTTCC CAATATTCCG
CAAATGTCGA GGGAGAATCA GAACGACACA GCTAAAGATC TAGTCAGGGC CCACACTGGC
AAGTGGGGTG TGTTGAGAAG AAGGGTGAGG GGTGCTGGAG CTGTCAAAGG GGCTCTTAAT
GCAGCAGCGC CAAACAGGAA ACGTGGTGAC GATGGAGAGG AGGAAGAGAA ACGAAGGAGT
GGTGAGCACG ACAGGGCTTC TCAAGATGCC TTTGCCGCGA GATATCCGGA GCCTAGAAAA
GGTCCGTCGG CTGGCGGTTT TGGCGGAGGG GCTGTTCCCG GTGGAGCTTC TGTTCTATCT
TCTCTCCTAG CATTATACGG TCAGCAGAAT GACCAACATT CTGCCAATAC TTCTGCCGCC
AGTTCAAGGC GAGGATCTGA AGATGAGTAT TCGTCTGGAG ATGAGCGATC AGCTGCTAAA
GGGGGAAGAC ATGCGTGGCG GCACCTCGGC AGGCGATCGG CAGACGAAGG TCTTCCTGCA
TTTGCAGTGC ATGATCAACC TCGTCCGTCC AACGTGCAAC CTCCCCGCGT TTCCCAAGGT
TCGCTGGATC CCAATGATCC GACTTCTCCA ACCTCACCAG GTTTCGGCCC CGATTCAGGT
CAAGATCACG AATATTCGCG TACCCAATCT AGGTACGACG ACACACCTGG ATCCCCTGGA
TTCAAGGGAT TCTTCCAGAG GGCAAAGGAG CAGCTGCAGT ACAATCGTCC GGACGCAGCT
AGGAACGCGG GAGGTGTATT TGGCGCTCTC ATTCAAAATA CTCAAAACCT TTCAGGTGCT
GCTACTCCGG CCGCTTCCAC TCTTGCCCCG GCTGCTAGGC GCCCCGGTTA TCAGTTGAAC
AGGTACTCAC TTGGGGATGT CAACGATGAG ACGCGTAAGG GGCCTTGGCG ACCGCCTTCC
CGTCCCAGTT CTGGAGCGGG CTCCCGAAGT GGTTCTCGTC CGGCATCCAT TCATTCATCT
ACAGCCGTTT CCGGCAACGG CGAGTCTCCC AAGGATGACA GCGGCAACTC TTTCGGTGGC
AAGAAAGCTA TATCGAGCGA CGACCTTATG AGCATGCGTA AAGCAAACGA GAGTACTTTA
AGCCTTGGGG GCAAAAAACG TCCCAAAACG GGCTTGCATC TCGAGTCATT GGCCCATCTC
CCTGTCGCAG CGGTAAAAGG CGGCGGAAAG CAAATCAAGA ATGCCGAAAA GTGGCTGCTC
GGCGGGAAAA CGCCTTTGGG ATCAACGCCT CCTGAGAAAG GCGGTGCCGA TTACTTCCAC
AGGCCATTGA CTGAAGATGA GCGGCGTCGA AAGGAGTGGG AAGCGGAAAA GAAAAAGAGA
AAGAAGGCGA GGGAGGCTAG GAAGAAGCAG GAGATCTTTG TGAGTGCGAA CGATCCACGC
TTTTGAGTCG TATACTGACT ACTTTGAAGA TTATTCAACA CGTTGCTGCC ATTCTGTCGA
GACAACAGTT CTTGCTCAAG CTTGCTCGTG CCTTGATGAT GTTCGTTTTG GCTTTTGTTT
TCTTCAAACG GAAATTTTGC AATGCTAATT TGTGGTCTGG TAGGTTTGGC TCTCCTTCTC
ACCGTCTTGA GACGCAAATC CAGGCTACTG CCAAGGTGCT TGAGATCAAT TGTCAAGTCG
TCTATCTTCC TGGAACTATG CTCGTCTCTT TTGGTGATGA CGCTACACAC ACGTCCGAGA
CCAAATTCTT GAAACAGTCT ACTGGCCTCG ATCTAGGCAA GCTTCAAGCC ACCCATCACC
TGTATTGGAA TGTCGTCCAT GACAAGATGT CTGTTGATCA GGCCAGCAAA GACCTTGATG
TTTTGATGAC GACGCCAGTC TACTATACTT GGTGGCAGAC TCTGGCTATC GGTGCCCTTT
GTTCCGCATT TATTTCTGTG ATGGCTTTCT ATGGGTGAGT TTCCGGCTTA TCCGCCAGGC
ATCAAATCGG AATAGTCACT GAAAATGTCA CAGTTCTTTC ATCGACGCCC TCATGTCCAT
GGTACTCGGT GCTACACTCG TCGGTGTTCA AATGCTTGCG GCTCGAAACG ACATGTTCTC
CAACGTATTT GAAATCGCCA TTGCCACGCT TATTTCCTTT GTTGCTGCAG CTCTGGCCTC
GACAAAGGTT TTCTGTTATA CAGCGTTGGT CAGTGGTGGA GTAGTTTTAA TCCTTCCTGG
TTATATCGTC TTGTCGGGCG CTTTAGAGTT GGCTTCCAGA AACATCACTG CAGGCGCTGT
ACGAATTGGT TATAGTGAGT TGACCATGTT TCCAAAAATG ATCAAGGCAG TCTCTAATCG
CCAACCAGGT GTTATCTACT CTCTTTTCCT CGGTTTTGGT ATTTCCATGG GTGCCGTCAT
CTATTCCAAG ATAACGAAGC ACGATGTAAG TCAGCTGGAG AGCGCGATTA TTCATGTCAT
ACTTGTTAAA TGCTCATCCT CCACAAAGGT GTTAAACTCA AATGACTATA CCTGTGGGAA
CACTCATTAT AGCGGGTCCC CTTGGTACAT GGAAACTCCG TCGGCTTGGT GGTGTGAGTA
TTTGGATTGC TGGAACTTGC CTATTCGAAG GCTTATTTTT TATTAGACTT CTTGTGTGCC
CCAGGGTTCT CCCTCGGTCT ATCACTCAAG AATCAGCAGC CGTTATGGGC CAAAGAGCTG
GTAAGTTGGG ACATCCATTC AGTCTTTCCA TATATATTTC TTACTCGTTT TCTAGCCTGT
GATGGTCATT ATTTCGTGTG CTGGATGGAC GTCCAATCAC TTTTCGGCGT TGGCGTTCCC
TGGCCGATCG GATTTGACCT CTGCTATTGG TAGTTTTGTG GTTGGTACCC TGGGTAACAT
TTATGGACGA TTCTCCAACG TGAGTCTTTT CGCCTTTGCG GTTGGATAAT TCGGACAATC
ACTGACGAAT GTCTCACAGG GTTCGTCTTT CCCCGTGACG GTGCCTGGTA TTCTCATCCA
ATTGCCGTCC GGTTTGTCCA ACGGTGGTAT CTTCAACTTT GCGACCGAAT CGTCTAGTGG
GTCTTCCACG GCGTATAGCG ACGGTTTCTC TGTGGCCGAG CAGTTGGTGG CCGTTGCGAT
TGGTTTGACG TGAGTCATCG GCAGTGTAGG CATGTATGAG CGACGGCTAA CTAGGGCATG
TAGCGTCGGT CTGTTTGTCA GTGCGGCGGT CTGCCATCCA TTTGGCGGCG GCCGCAGGAG
AGGAGCTGGT ATCTTCGCGT TTTAG
|
|---|
| Protein sequence | MSIPDNPFQP PTDTSPPTLQ LEATSHDDGQ SIKSGINGSP MPAGSPHSHL SPPSEIASPR
PVLSNLQHLG PGVKTPRRVQ WTSDPHIVQL QPVEPAPGSP QTLDPSNIDE FRDALERHRS
GGAGRRPPSQ LSRQSSASGS VTRHGTDDEE DYDYRTDVDP PQRPDIERHD TDETMYESNL
IDNGMRGHVS QYIAPGETDG LPNIPQMSRE NQNDTAKDLV RAHTGKWGVL RRRVRGAGAV
KGALNAAAPN RKRGDDGEEE EKRRSGEHDR ASQDAFAARY PEPRKGPSAG GFGGGAVPGG
ASVLSSLLAL YGQQNDQHSA NTSAASSRRG SEDEYSSGDE RSAAKGGRHA WRHLGRRSAD
EGLPAFAVHD QPRPSNVQPP RVSQGSLDPN DPTSPTSPGF GPDSGQDHEY SRTQSRYDDT
PGSPGFKGFF QRAKEQLQYN RPDAARNAGG VFGALIQNTQ NLSGAATPAA STLAPAARRP
GYQLNRYSLG DVNDETRKGP WRPPSRPSSG AGSRSGSRPA SIHSSTAVSG NGESPKDDSG
NSFGGKKAIS SDDLMSMRKA NESTLSLGGK KRPKTGLHLE SLAHLPVAAV KGGGKQIKNA
EKWLLGGKTP LGSTPPEKGG ADYFHRPLTE DERRRKEWEA EKKKRKKARE ARKKQEIFII
QHVAAILSRQ QFLLKLARAL MMFGSPSHRL ETQIQATAKV LEINCQVVYL PGTMLVSFGD
DATHTSETKF LKQSTGLDLG KLQATHHLYW NVVHDKMSVD QASKDLDVLM TTPVYYTWWQ
TLAIGALCSA FISVMAFYGS FIDALMSMVL GATLVGVQML AARNDMFSNV FEIAIATLIS
FVAAALASTK VFCYTALVSG GVVLILPGYI VLSGALELAS RNITAGAVRI GYSVIYSLFL
GFGISMGAVI YSKITKHDVN FLCAPGFSLG LSLKNQQPLW AKELPVMVII SCAGWTSNHF
SALAFPGRSD LTSAIGSFVV GTLGNIYGRF SNGSSFPVTV PGILIQLPSG LSNGGIFNFA
TESSSGSSTA YSDGFSVAEQ LVAVAIGLTA CSVGLFVSAA VCHPFGGGRR RGAGIFAF
|
|---|
| |