Gene CND02470 details

Gene Information

• Locus tag: CND02470
• ID: 3257469
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006686
• Strand: -
• Start bp: 667704
• End bp: 669830
• Gene Length: 2127 bp
• Protein Length: 520 aa
• GC content: 49%
• IMG OID: 638256181
• Product: conserved hypothetical protein
• Protein accession: XP_570259
• Protein GI: 58266206
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0564] Pseudouridylate synthases, 23S RNA-specific
• TIGRFAM ID: [TIGR00005] pseudouridine synthase, RluA family

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0281406
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCTCCCCTCG CCTCACCCGT CTGCAGCATG CCAGACCCAG CTGCTTCATC GTCAAACATG 
TATCCTCGAG GAATGAACCC CCGCCTTCGC TACATCAAAT CCTACTGGTG GCCGTACAAG 
ACTTTCGTAA AGCAGAGGTA GGCTCGATCG AGCTCTAGCA ATTCCCACAG GCTCCTGACT 
CTCGTGTACA AAGGTGGATC GGACGCCAAC TTCTCGAGGT TATCACCACA GAGTTCAGAG 
ATCGCTCCAT GGAGTACTAC GTAAGTCCAT CTATATTCAC CTTCCTCCAC GAATGCTCAA 
CATGTATCGT AGAGGCACGC TCTTGAATCC GGTGTGACTA GAGTGAACGG AGTGGTCGCA 
CAACCAGACC TCATTCTTCG TAATGGTGAC CGTATAGAGT AAGCACTTAT CTATAACAAG 
ATGAAGTCAC TAACATCCGT GGCCTGCAGC AATACAGTTC ATAGACATGA ACCTCCTGTG 
ACCAATGATC CTATCTTGGT TCTTCATATC GACCGAGAAC GAGAGTTCAT AGTCATCTCC 
AAGCCAGGCA GCTTAGTGAG TATATACATG GCAATATCGT CCCATTAAAT TGACGGAGAC 
CAGCCTGTAC ACGCCGCTGG AAGATACTTC AAACATACCG TATTAGAGAT GATGGAGTCC 
GACTACGGTC TCAAGTGTTA TTGTAAGCCT CCTTTTCGTG CCTCGCCTGA ATAAGACTGA 
TATGGTCGCT ATAGCTGTGA ATCGTCTGGA TCGGTTGACT TCCGGCCTGA TGATCCTTGC 
TCTATCGGGC AAGGCGGCCA GTAAACTAGC GCGCGAATTT GTGGAAGGAA AAGTGAAGAA 
GGAGTATGTC GCTAGAGTAA AGGGCAAGTT CCCCAAGTAA GTGCCACTAT TCCCCATCAA 
CCCCTTTACG CTCATCAAGT TGTACTCAGG GAAGAAATTA CCGTCGATAA ACCCATGATG 
ACGGTCGATC GTCAAATGGG TTTGGTTATC ATCACTCCCG AAGGAAAGGT CAGTCCTGCC 
TCCAAAAAAA ACGAGTTATT TGTCTAAACA GTCACAGGAT GCGGTGACCA TCTTTAACAG 
GATAGCATAC GACCCAGTGA GAGATCAGAG TGTCGTCCGT TGTAAGTGTT GATATAACAG 
CTGTGCATGA CTCGATTAGA CCTAACGGTA TAATGTGTAG GTCGCCCCCA GACCGGCCGA 
AGTAAGTTTA CCTATTTCCT CGCTGTAGAT GGATTATCTG ACCTCCAAGG TAGCTCATCA 
AATCCGTGTC CATCTTCAAT ACCTTGGCCA CCCTATAGCT AATGATCCAC TTTACGGTGT 
CCCGTCTGTT TGGGGCCCTT CCCTGGGGAA AGGCGGTGTT GACCTCACCC CTTCTACCAA 
TGGTATTTCT CAAGCCGATG CTCTCAAGGC TCGTGCCGGC ACCTCAACTC CTCAAAATAT 
TGATACTAAC CGAGAATACG ATAACATCGA TCTCAATAGC CCCATTAGAC TGAGTAATCA 
GGCTAGAGAA ATCATCGCCA AGTTGAGAAG GCAGAAAGAT GACGCCGAGG ACTGGATCAG 
GTGAGCCACT GCGACTACGA CTGTGTAGAC GAAAAAAAAA GAGTCTCTAA TGGGTAATTG 
CAGGTGGTCT GAGGTTATAT TTTCCGCAAA AAAGGCCCAA GAAGACCTTG AGTCCGAGTC 
CAAGTCGTCT ACTCCTCAGG TTGTCCCTCG TCTCGCTGGT CGTCAAGAAG CTCTCAAGCT 
CCCCGATCCA CTTCCTGATG ACACCCCTTC TCCCCTGAAA CCACCCGTTT ATCTTCCCCC 
GGGGTTTTGC ACCGAATGTT ATGTTCCCGT CCCCGACGAT CCTGATCCAG AGACTTTGTT 
CATCTATTTA CATGCCCTTC GGTATACAAC CGAACAATTA GGGACTTGGG AGACGCCGAT 
GCCGAGATGG GCTAGTGCAG ATTGGGATGG CGATTGGAGA GGGTGGGAGG AAGGGGCAAT 
TTTACCCAAT GCATTGGAGG AAGATAGGCG TAAGATGGAA GCCAAAGCCG CAAAGAAGGC 
AGATTCTGAT CTGTCCAGTA ATTTAGAAGA GAAGGCGCTG ACGCCCGTCG CCCTTGCAGA 
AGGTTCAGTG CAAGATTAGT GAGCGGC 

 

Protein sequence

MPDPAASSSN MYPRGMNPRL RYIKSYWWPY KTFVKQRWIG RQLLEVITTE FRDRSMEYYR 
HALESGVTRV NGVVAQPDLI LRNGDRIDNT VHRHEPPVTN DPILVLHIDR EREFIVISKP 
GSLPVHAAGR YFKHTVLEMM ESDYGLKCYS VNRLDRLTSG LMILALSGKA ASKLAREFVE 
GKVKKEYVAR VKGKFPKEEI TVDKPMMTVD RQMGLVIITP EGKSQDAVTI FNRIAYDPVR 
DQSVVRCRPQ TGRTHQIRVH LQYLGHPIAN DPLYGVPSVW GPSLGKGGVD LTPSTNGISQ 
ADALKARAGT STPQNIDTNR EYDNIDLNSP IRLSNQAREI IAKLRRQKDD AEDWIRWSEV 
IFSAKKAQED LESESKSSTP QVVPRLAGRQ EALKLPDPLP DDTPSPLKPP VYLPPGFCTE 
CYVPVPDDPD PETLFIYLHA LRYTTEQLGT WETPMPRWAS ADWDGDWRGW EEGAILPNAL 
EEDRRKMEAK AAKKADSDLS SNLEEKALTP VALAEGSVQD