Gene CND02290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND02290 
Symbol 
ID3256973 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand
Start bp611412 
End bp612480 
Gene Length1069 bp 
Protein Length218 aa 
Translation table 
GC content45% 
IMG OID638256163 
Productconserved hypothetical protein 
Protein accessionXP_570447 
Protein GI58266582 
COG category[A] RNA processing and modification 
COG ID[COG5246] Splicing factor 3a, subunit 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTGCATCCT TCGTTCATTT TCAATCGTCC ATATCCCAGG AGCAAAAATA AGCAGCGCAC 
GAGAGTAACT ATGGGTAGGC ACAGCTCCAC TGTTTGTATT GCTCAACGTC AGTGCTGACT
TCTTCTCTGA ATGCAGATTA CCAAGTAAGC AGCAGCTGTC TGTTTTCCTT ATCAATAAAA
CGTACTGACC CGTTTGCAGA ATCGAGCAGG TGCAAACAAG GGTAGTGGTG GTGTCGGTGA
GTGTTGTGCA TTCGTCAAAA TGCGAAGCGT TATTGATGTA TTTCTCTGTA GCTGGTGCAT
CCGAGACAGC AGTGGACAGG AGAGAACGTC TTCGAAAACT TGCTTTGGAG ACTATTGACT
TGGCCAAAGA TCCCTATATC CTTAGGTCAG TGCTTGTGCT TGTTACGATG TCAAATTATT
GTTTTCTGAC ATTCTGTCAT TCATAGGACC CATCTCGGTA CATTAGAATG CCGTCTTTGT
CTCACTCTTC ACGTCAACGA GGGTTCTTAC CTTGCCCACA CTCAAGGAAA GAAACATCAA
ACAAACCTTG CTAGGCGTGC AGCCAAGGAC AACAAGGATC AGACATTAAT GATCCAAGCT
CCCACAGCCG CGCAACAAGT GAAGAAGAAA GTGTTTGTTA AGATTGGAAG ACCTGGTAAG
TCGGTTTCGA CGTCCAATCT TGCCTCTCAG GAGTCTGATT CACGGCCCAG GATACAAAAT
CATCAAAATT CGAGAGCCTG TCAGTCAAAG GATGGGTTTA TTATTCACTG TGTCTTTACC
TGAGATAAAA GCGGGAGAGA GGCCAAGAAG GAGGTTCATG TCTGCTTTTG AACAACGGCG
AGAGATTCCC AATAAAGCTT TCCAGTACTT AGTTGTGAGT TCTACTCAAT CGGACATTTC
TTCCGCCCTA CTAAACTATA GGTTGTAGTT GGCAGCCGAG CCATACGAGA CCATAGCATT
TGCCATCCCC TCAAAAGAGA TGGTTGACGT TGATGAAGAC CCGGAGTCGA CATGGGAGCA
CTGGGATGCC GACGAGAAGG TTTACAGTTG TCAATTCTTG TATAAATAA
 
Protein sequence
MDYQNRAGAN KGSGGVAGAS ETAVDRRERL RKLALETIDL AKDPYILRTH LGTLECRLCL 
TLHVNEGSYL AHTQGKKHQT NLARRAAKDN KDQTLMIQAP TAAQQVKKKV FVKIGRPGYK
IIKIREPVSQ RMGLLFTVSL PEIKAGERPR RRFMSAFEQR REIPNKAFQY LVLAAEPYET
IAFAIPSKEM VDVDEDPEST WEHWDADEKV YSCQFLYK