| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND02170 |
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| Symbol | |
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| ID | 3257101 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006686 |
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| Strand | - |
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| Start bp | 581520 |
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| End bp | 585155 |
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| Gene Length | 3636 bp |
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| Protein Length | 994 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 638256151 |
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| Product | 116 kda u5 small nuclear ribonucleoprotein component, putative |
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| Protein accession | XP_570208 |
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| Protein GI | 58266104 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AATCCATCCA ATTCGATTTA CCTGCAGACT ATACTCCTTC CTATAGGAGA ATCACTGCGA
TCCACGTTTT TCCCCGATTC CCCACCGAAG TTGAATCAGT CAGAAGATGT CCACAGAAGA
TTACGACGGT TAGTGTACTT CTCGACGTGA AATGCATCAC TAACGGAAAC TTTGTAGAGT
TTGGTAACTA TATCGGAGGT GATCTCGACT CCGACGATGA GTCCGACGTC TCCATTTCCC
CTGCTGCTCC TCCGCCTGCG GCTCCTGGAC CTTCAGCTGG GCCGTCAGCG AGCTATGCTC
CTCTTGAAGG TTTCGATGAA GACGAGGCAA TGGAAGATGA GGAACCCGGC ATGGCCATGC
AGCTCCACGG CGTCGATGGT TCAACAGGCC AACAAGTAGT CCTGCACGAG GATAAAAAGT
ACTACGCCAC TGCTGAGGAG ACCTACGGTC CGGATGTTGA GGCGTTGGTA CAGGAAGAGG
ATCTGCAACC TCTTTCTGAA CCCATTGTGC AGCCGATCAA ACAAAAGTCA TTTACCGTAC
AGGAAAAGGG ATTGCCTGAA ACTCGGTTTG ACCGAAAGTA CGTTTCGCTA TCAGGTTTCA
GGAGGCTGCT GACCCATTGA AGCTTTATGA TTGATTTGAT GGATCACCCT TCAATGATCC
GAAATGTCAT GGTTGCCGGA CATATCCATC ATGGAAAAAC TTCATTGTTA GATATGCTGG
TGTTTGAGAC CCACAAAATG ACTTGGGATG CCGACCAACA GGCAAGTATA TCTTTGGAAA
TTTCAGTCGC CTGGTGCTGA TGTGAAGCAG ACTCGATATA CTGATACGCA CATACTCTCG
CGTGCTCGCG GTATTTCCGT TAAATCTGGC CCTATGTCTC TTGTTCTTCA AAACTCTAAA
GGAAAGTCAA ATCTCATCAA TATTATCGAC ACTCCAGGTC ACGCCAACTT CGTTGACGAG
GTCGCCTCAA TTGCCCGGCT TACCGATGGT GTGGTCATTG TGGTGGATGT GGTTGAAGGT
GTGATGCACG GCACCGAGCA AGTGATCCGT CACGCAATGC AGGAGAAGTT AAAAATGGTG
TTGGTTGTAA ACAAGATGGA TAGATTGATC TTGGAGTTGC GTTTACCGCC TAGCGAAGCT
TTCTTCAAAA TAAAGCACAC CATTGAAGAA GTCAACTCTA TCATTGCGTA GGTTCAGTCA
CTTTTGTATA ACAATGTTTT CTCATCAGTC TTTTAGGTCA ATCGATCCTG ATGACTCCTT
CCGTCATTCT CCTGAAAGAG GCAACGTAGC GTTTTCGTCA ACGCAGATGG GTTGGTGTTT
TACCCTCAAA ACATTCGCCA ACATGTATGC GGACACTTTT GGCTCTTTCG ATATCGATGA
GTTTTCTCTC CGATTATGGG GCAACATCTA CTTTGACTCT TCCACCCGAA AGTTCACTCG
CAAGCCTGCC GACGTCGAGA GCAAGCGTTC ATTCGTACAC TTTATTTTGG AGCCTTTGTA
CAAACTCTAT ACTCAAGTAT GTGTCATCCG CCTGCCCCTC GATGTAAGCT GACGAGTTCA
ATATAGGTAT TGAGTGCAGA CCAGGAAACA CTGAAAGAAA CATTGGCCGA TTTGCAGATC
ACACTCAAAC CTTCAGTATA CAAGATGGAT GTCAGACCCC TGTTGAAGGT CGTGTTGGAG
GCATTTTTTG GCCCATCAGT TGGATTGATA GACATGATCA CAGAATTTCT ACCTTCTCCT
CAAGGAGGCG CTGAAGCGAA AGTGAGTCAA GAGATGATAA GTGACGGTGT ATGACTGATG
CAAGAACAGA TACGGCACAC GTACACCGGA CCTCTCACTT CTAACCTTGC CGATTCTATG
ATCAGCTGTG ACCCCCAAGG ACCCACTGTT GTACATGTGA CCAAGCTCTA CCATACTGCC
GATGCCGAAC ATTTCCGTGC TTTTGGACGT GTCATGAGTG GAACTGTCAA AGTTGGTCAA
GTTGTCAAGG TGCTGGGAGA AGGTTACTCT TTAGAAGACG AAGAAGATAT GATCAGTGCC
ATTGTGGATG GTATTATGAT TGATGAGTCC AGGTGAGTTA TGACACTTGG GGGAATAAGT
AATGTGTGGC TGATAAACGT AGATATAACG TGGATATTGA ACGTGCTCCC GCTGGAAATC
TTGTCCTCCT ATCTGGCGTT GATGCGTCCA TTTCCAAGAC TGCTACAATC GTCTCAAAAG
ATGTTGATGA CGATCTCTAT ATCTTCCGTC CCATAAAGCA CATGACAGCT TCAGTTCTCA
AGGTTGCTGT TGAACCTGTT GCCCCGTCCA ACCTACCAAA AATGCTTGAT GGTCTGCGAA
AGGTCAACAA GTCATACCCT CTTGTCACTA CCAAGGTTGA GGAGAGTGGA GAGCACATCA
TCCTCGGTAC AGGAGAGCTA TACATGGACT CTGTCTTACA TGATTTAAGA AAGTTATTCT
CAGAAATAGA GATCAAGGTC TCAGATCCTG TCACCAAGTT CTGTGAAACA GTAGTGGAAA
CTTCTGCTTT GAAATGCTAC GCCGAAACGC CCAACAAGAA GTGAGTTGCT TGAACACCCT
TGTATCGTCA ACTGATGAAT TACAGGAATA AACTGACCAT GATCTCCGAA CCGCTCGAGG
CCGGGATTGC CGCCGACATT GAGGCTGGCA GAGTCAGCAT GAAGATGACC AATAAAGAAA
GAGGGAAGTT CTTTGAGAGC AATTACCAAT GGGATCTGCT GGCTTCCAGG AACATCTGGG
CCTTTGGGCC GGACGAAAAT GGGCCGAACG CGTTGATTAA TGACACCCTG CCCTCCGAGG
CGAGTTGATC TCTTTTTACA GTTATAAATA TCGCTGACAG AAGGGCAATA GGTGGACAGT
AAGCTCTTAT CGAGCGTCAA GGAAAGCGTG AAGCAGGGCT TCCAGTGGGG TACCCGTGAA
GGACCTCTAT GTGACGAACC CATTCGCGGT GTCAAATTCC GCATTCTTGA TGCCTCTCTC
GCACAAGAAC CTATCTACCG AGGGGGCGGC CAAATTATCC CAACCGCTCG ACGAGTTTGT
TACTCCTCCT TCCTCCTGGC CACCCCTCGT CTTCTCGAAC CTGTATACTA TGTTGAGGTT
CAGGCTCCTG CCGATTGCGT CGCCGCTGTG TACACAGTCC TCTCTCGCCG ACGTGGCCAT
GTCACTAAAG ACATTCCTAA ACCTGGTTCT CCGCTCTACA CCGTCAAGGC ATTCATTCCT
GTGCTCGACG CAAACGGATT TGAAACTGAT TTGAGGACCG CAACATTGGG TCAGGCATTC
TGTCAAATGA GCTTTGACCA CTGGAGTGTT GTGCCTGGAG ATCCCACTGA CAGCAGCATA
CAGCTAAGAC CTTTGGAACC GGCGATGGGA CAGAGTTTAG CTAGGGATTT GGTCCTGAAG
ACCAGGCGAA GGAAGGGTTT GAGTGACAGT ATCGCTGTGA GCAAATACTT GGAAGATGAG
GTAATTATGA TGTGTTCCTC ATGCGAGTTA TACTGACAAT CATTCTTAGA CGATCATTGC
TATCAGCGCA TCTGGTAATG CAGATTTGTT GGGTTAGAGT CATAGCTGGA AGTATTCGGA
AAAGTGCTTG TTATCATGCA TATTCACGTC GACTTG
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| Protein sequence | MSTEDYDEFG NYIGGDLDSD DESDVSISPA APPPAAPGPS AGPSASYAPL EGFDEDEAME
DEEPGMAMQL HGVDGSTGQQ VVLHEDKKYY ATAEETYGPD VEALVQEEDL QPLSEPIVQP
IKQKSFTVQE KGLPETRFDR NFMIDLMDHP SMIRNVMVAG HIHHGKTSLL DMLVFETHKM
TWDADQQTRY TDTHILSRAR GISVKSGPMS LVLQNSKGKS NLINIIDTPG HANFVDEVAS
IARLTDGVVI VVDVVEGVMH GTEQVIRHAM QEKLKMVLVV NKMDRLILEL RLPPSEAFFK
IKHTIEEVNS IIASIDPDDS FRHSPERGNV AFSSTQMGWC FTLKTFANMY ADTFGSFDID
EFSLRLWGNI YFDSSTRKFT RKPADVESKR SFVHFILEPL YKLYTQVLSA DQETLKETLA
DLQITLKPSV YKMDVRPLLK VVLEAFFGPS VGLIDMITEF LPSPQGGAEA KIRHTYTGPL
TSNLADSMIS CDPQGPTVVH VTKLYHTADA EHFRAFGRVM SGTVKVGQVV KVLGEGYSLE
DEEDMISAIV DGIMIDESRY NVDIERAPAG NLVLLSGVDA SISKTATIVS KDVDDDLYIF
RPIKHMTASV LKVAVEPVAP SNLPKMLDGL RKVNKSYPLV TTKVEESGEH IILGTGELYM
DSVLHDLRKL FSEIEIKVSD PVTKFCETVV ETSALKCYAE TPNKKNKLTM ISEPLEAGIA
ADIEAGRVSM KMTNKERGKF FESNYQWDLL ASRNIWAFGP DENGPNALIN DTLPSEVDSK
LLSSVKESVK QGFQWGTREG PLCDEPIRGV KFRILDASLA QEPIYRGGGQ IIPTARRVCY
SSFLLATPRL LEPVYYVEVQ APADCVAAVY TVLSRRRGHV TKDIPKPGSP LYTVKAFIPV
LDANGFETDL RTATLGQAFC QMSFDHWSVV PGDPTDSSIQ LRPLEPAMGQ SLARDLVLKT
RRRKGLSDSI AVSKYLEDET IIAISASGNA DLLG
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