Gene CND02120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND02120 
Symbol 
ID3257230 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand
Start bp569068 
End bp570582 
Gene Length1515 bp 
Protein Length260 aa 
Translation table 
GC content48% 
IMG OID638256146 
Productconserved hypothetical protein 
Protein accessionXP_570451 
Protein GI58266590 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5078] Ubiquitin-protein ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCCACTACAT TCCCCTCTTG ATTACCCTCT TGTCGCCGTC GGCTGCCATT ACACGCCAAT 
ATCCCATTTG CTCTCATTTT CACCTCTCAT TTCTACCTAT CGCCCATAAA AGCACTATCT
TTGCCACCTT CTCCCCTCCA CCACCTCCAC CATGGCACCC ACACGCCCAC CAAACGTCGA
AATGGCCACC AAGCGTATCA AGAAAGAGAT CGCTGACTTG GCCAAAGAAG ACCTCGGTTC
CATCATTCTT GCTCCTGAAG AAACCAACAT CTTACACTGG AAGGCGAGAA TACCTGGACC
GGTCGGTTCG CCTTACGAAG GTGGCGTTTT TGATGTGGAC ATTAGAGTGC CTCATGATTA
CCCGTGAGTG AATACATATG CAAAGGGGAT CATCATTCAT TGAGTCGCAG CTTTTCGCCT
CCTCACTTGC AGTTTATGAC CAAGGTCTAT CACTGTAATG TGGCGTCTAA CGGTGCTATC
TGTAAGTGCC TTCTGCTTGA CGACCATACT GTTGCTGATG TTCGTCAGGT CTTGACGTAT
GTCTATTGTT TTGGATACAT ATGCAATTAA TGCTGAATCT TTCGTAGCTT TTGAAGACCG
CCTGGTCCCC CGCCCTCTCA TTATATAAAG TCATACTCTC TTTGTCCTCC CTTCTGACCG
ATCCAAATCC GGCAGATCCC CTAGTTCCAC CCATTGCTTC GGAATATCGG AACAATAGAA
GAAAGCACGA CGCGACCGCC AGAGAGTGGG TCAGAAAGTG AGTTCCAGGA ATTCACAAAG
ATTTGATCGA GTGCTAATGT CGAGACGGTA AAGGTTCGCA CTACCTAAAT CGAATCCACC
ACCTGCGCAG CTCAAACCAA AACTTCAGCC ACCTGCGTTA CGCCGCACAA TCTCGCGCTC
TCTCCCTGAT TCTACATCGC CCGCGCCTCC ACCGCAGCTT GCCGGTCAAA GGCGCGTCAT
TCTAGAAGTG GGAGATTCTG ACGATGAAGG CGATATACAA GTATTGGGAG ATAGCTCACG
GGGAAATAGC AGTCAACCAG CGGCTGTAAC GACAAATGGA GCGGGGAGGC AAAAAAGGGC
AAGGACTAGT GGACAAGGAG GAAGCGCAGG GGATGCGATC GTCATTGATG AGTAGACACA
CGGGACGTGA CGGATAGTGG ATGATAGGGA TAGTTCGTGG TATGGCTGTT ATGCTGATGT
CGTAAGCCAT TTTTGTGATA TAGGAAGAAA ACGCACGGAT ACTTTCGCTA CAGTGTAATT
CATGATATGT TATGATTTTT TACGATCCTG CTGGCCTCAT ATGATAGTAC GTTTCGCTGA
TATTATACAG CCTTGAGCCC GGCGTTATTT GAGGATGCCG ATTTCCACGG ACGAGCCGAA
GTGTTTTTGT CGCCATCTGG ATGGTGCATT GGACAAAGAT GATAAGTGCA ACATCATTTG
GACTCAGGCA AATACAGTAG TAAAATAAAA GGCGTACAGC AGAGAGCACG CAGTTTATTT
AGATCACGTT TGCTT
 
Protein sequence
MAPTRPPNVE MATKRIKKEI ADLAKEDLGS IILAPEETNI LHWKARIPGP VGSPYEGGVF 
DVDIRVPHDY PFSPPHLQFM TKVYHCNVAS NGAICLDLLK TAWSPALSLY KVILSLSSLL
TDPNPADPLV PPIASEYRNN RRKHDATARE WVRKFALPKS NPPPAQLKPK LQPPALRRTI
SRSLPDSTSP APPPQLAGQR RVILEVGDSD DEGDIQVLGD SSRGNSSQPA AVTTNGAGRQ
KRARTSGQGG SAGDAIVIDE