Gene CND02070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND02070 
Symbol 
ID3257100 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand- 
Start bp555857 
End bp557082 
Gene Length1226 bp 
Protein Length253 aa 
Translation table 
GC content49% 
IMG OID638256141 
Productconserved hypothetical protein 
Protein accessionXP_570455 
Protein GI58266598 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.413309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCGACTTTTT GCATAGCTAC CAACACAAAC GCCAAAACAA TGGACAAGCG AACCTATCTC 
AGAAACGACC TTCTTGCTGG AAAACCCGGT ATTGGGATGT GGCTCACGTG AGTCAAGTCG 
TGGAATATTC CTCGCAATAG CTAACTGATT GCGTGATAAT AGGTTGCCTG GGTCCGCATT 
AGCCAAGACC GTAGCCACTA TCCCTGGCTT CAACTGGATC CTTATTGATG CCGAGCATGG 
CCAGATTACA GACAGGGACT ACTTTGATGT GGGTATCTAT AGACGAGTAC TGCCTTGCTT 
GCCTCGCGAA AGCTCACAGT ACGCTGCTGA ATAGCTCACC AATCATATCA CAACCGAAGG 
CGTTTCACCC ATTATCCGTA TCCCCTCCGA TGAACCTTGG TTAATCAAGC GGGCCCTCGA 
CTCAGGAGCC CACGGCTTGA TGATTCCTAT GTGTCACAAC CCTGTACGTT CCGGGACATT 
CGTTTGCATG ACCACGAACT CGGCACTGAC AGCGACCTTG TAGGATGTCG CCAAAAAGGT 
TGTCTCTTCC AGCAAGTACG CTGCTCGAGG CACTCGAGGA TGTGGTTCAC CTTTCACCCA 
GATCATCTTC GGTGTTCCCG AGTCTCAATA TGAGGCAACT TGCAACGACA ACTTGATGGT 
CATCGTCCAG ATCGAGTCGG CAGAGGGTGT GAAGAATGTG GAGTCCATTG CTGCTGTCCA 
GGGAGTGGAT GTTCTTTTCG TTGGTGGGTT CAGTCTCATG GTACGCTTCT TGGATAGATT 
TCAGATATTC ATCGTAATCT GAGTAGGCCC CTTTGACCTT GCCAAGTCAA TGGACATAGA 
GTTCGGTGGC GAGGAACACG AGGCGGCTAT TGCTCGAACC CTTAAGGCAT GTAAAGATAA 
CGGCAAGAAG GCAGCCATCT TTTGTAAGTC AGCAGTGGGG CGGACCCTGT CATGTAACGA 
CTAACTGTTG ATTTAGGCAT GTCCGGCGCC CAGTCCAGGA AGCGTTTGCA GCAGGGCTTT 
GATATGGTTT CAATCGCCAC CGATACAGAC TCTATAATTC GAGAGTTCTC CAGGCAGCTC 
GAAGACATGA AGGCTTGATC CGATGTATGC ATATAATTAT ACAGATAACT CCTACTTTCC 
TCATTTATGG TTAAGCGAGT TAATAAGTAA TGGGATCGAA CTCTTAAGCG AACCCTGTCC 
GCTGCATGAA TTATTCAATT ATTTTG
 
Protein sequence
MDKRTYLRND LLAGKPGIGM WLTLPGSALA KTVATIPGFN WILIDAEHGQ ITDRDYFDLT 
NHITTEGVSP IIRIPSDEPW LIKRALDSGA HGLMIPMCHN PDVAKKVVSS SKYAARGTRG 
CGSPFTQIIF GVPESQYEAT CNDNLMVIVQ IESAEGVKNV ESIAAVQGVD VLFVGPFDLA 
KSMDIEFGGE EHEAAIARTL KACKDNGKKA AIFCMSGAQS RKRLQQGFDM VSIATDTDSI 
IREFSRQLED MKA