Gene CND02020 details

Gene Information

• Locus tag: CND02020
• ID: 3256991
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006686
• Strand: -
• Start bp: 544222
• End bp: 546524
• Gene Length: 2303 bp
• Protein Length: 481 aa
• GC content: 45%
• IMG OID: 638256136
• Product: conserved hypothetical protein
• Protein accession: XP_570228
• Protein GI: 58266144
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0814] Amino acid permeases

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTTGATTGAC CAATATATGA GAGAATTACT CCCCCTTCCA TCTCCTTTTC AATCACAGAC 
AAATCAATTA AACAATCAAC AATGTCGCAA GATCCGTACA CCACCAAAGC ATCCGATGTT 
AATATGGATG ACAACACGAG TACCGACAAG AATGTCAGCC TTTCAAGAGT AGTCACCGCT 
CTTGAGCCGG AGCAGGTACA GGTAGTAGAT GGTGTTTGGG GTACTCTCGA TGAATCTGCA 
CCTAACTATC GAAGTCTTGG CTGGTAAGTA TGCTCTACAT GGGCGGTTTG ATTTGCAGAT 
GTCAACAAAT GAGCTGACCA CTGAGTAGGA TAAGAGCCAG TGTTCTCATG ATCAAAGTCC 
AAATAGGACT AGGCGTCCTT GCTATTGTAG GCTGACTTCA TCTCGTCCAA CGGTGTCACA 
TAGACCTAAT TGCCCCAAAC ATTTTTAGCC AGCTGTCCTG CATACTTTTG GTCTTATCCC 
TGCTATTCTT ATCATATTCG CTGTTGCTGT TGCCACCACT TGTATATCTC AATCATTTCT 
TCATCCATCT CCTCCCCTCT TCATTGACTG ATCCATAATT AGGGGCGGAT TACGTTGTAG 
GCGTGTTCAA GCAGAATCAT CCCGAAGTTT ATACTCTGGC AGAGTAAGTA CACGTCTTCT 
CTTTTCAAGA ACCAACATTC TCACTGTTTT ACACCCTTTA CTTCGCAATG GCTGACATTG 
AGCTCATAGT GTTGGCTATA TCATGTGGGG ACCTATTGGA CGAGAAGTGT TTGGCGCTGT 
CTACTGGGTA AGTATCATTA CGTCTAATAT TTTGACGAGG AAGAGTGAGA AGGAATTAAG 
GCTTATTTTT ATGCCAAGAT TCAACTTACT GCTGTCGCTG GGGCCGGCCT CCTCAGTATA 
TCTGTAGCTC TAAACGCAAT GTCAGGTCAT GGGACTTGCA CTATCGTCTT CGTCGTTGCC 
GCGGCCATCA TCAACATCCT TGTATCTTCC ATTCAAACAC TCGACAGAAT TTCCTGGATT 
GGATGGATAG GCCTTGTTGG TATTATGTCG TCCGTTATCG CCCTTGCCAT TGCTGTAAGC 
GTTCAAGATC GTCCCAGTGC AGCTCCTGCC ACCGGTGATT GGTCTCCCGA TATCGTTCTT 
GTTGGCAATC CCTCCTTTTC TGCTGCTATT GGTGCCCTAT CCAACATCAT TTTCTCCTTC 
GCCGGTGCCC CCAACTTCTT CAATATCGTT GCTGAAATGA AAAATCCCAG AGATTTTAAC 
AAAGCTCTCA TCTCCTGTCA GACCTTCGTA ACGGCGGCAT ATCTTGTACG TTCTCAGCTT 
GACAATCTTT AGAAACTGGC TCACCGTACT AAAAGATTAT TGGCTGCGTT GTTTACCATT 
ACTGTGGCCA ATATATTACT TCTCCAGCTC TAGGATCGGC AGGTATTCTT ATGAAGAAGG 
TGTGTTACGG TCTCGCATTT CCTGGCCTTG TGGTCGGATG CGTCCTGAAT ACACACCTCC 
CCGCCAAATA CAGTAAGCAT TGTCTCAACA TCGCAACAGA TCTCTAGGCT CATTTCGATC 
CCAGTTTTTG TTCGCTTGAT GAGGAACAGC AAGCATTTGA GTGCGAACAC TATCCAGCAT 
CGAGTTATTT GGATGTGAGT GAATATATTC AACAAGTAAC GACAAATAGT ATCGTACAAA 
ACTAATGAAG ACGTTCAGTT CCTGTGTCGT ATTTAATTGT ACCGTCTCAT TTGTAATCGC 
CGAAGGTATT CCAATTTTCA ACGACCTCAT CGGACTCATT GGGGCACTCT TTGCGACTCC 
CAATGCGATG TAAGCGGTTT CGCTTTCTAG CACCTGGGGG CCTCTAGCTA ATTCCATTCA 
GCATCTTTGA GTGTATGATG TATATCTGGG ATGTCTATTA CTGCGCCGAC AAGTATCCTA 
GCCAGCATAC CTGGAAACAG CGATCAATTC AAGCATTCAA CGTCATTATT ATGCTCCTCT 
CGATATTTGC CATGGTAGCC GGGACGTATG CCGCAGCCGT CACCATACGA GACGACGTGG 
CGTCTAACGC CACCTCAAAG CCCTTCTCTT GTGATGATAA CTCGGGATAG CCATGAGAAG 
TTGAGTATAG CAAATGTCCT ACCGTGTGAT TATTGGAATT GGTATTTTGC CCTCTTTTAC 
CAGCATTTCA AATTAGCATT TCATTCCCCT TAACTTTCAA TTTGTGTCTC CCATACGTAT 
GGCTGTATAT GATGTAACTT AGGAGCGTTG TTTGGATAAA AAGGTACTCG CTCGGTTGTA 
TGCAAACTCC TTGGTCCTAT CAC 

 

Protein sequence

MSQDPYTTKA SDVNMDDNTS TDKNVSLSRV VTALEPEQVQ VVDGVWGTLD ESAPNYRSLG 
WIRASVLMIK VQIGLGVLAI PAVLHTFGLI PAILIIFAVA VATTWADYVV GVFKQNHPEV 
YTLADVGYIM WGPIGREVFG AVYWIQLTAV AGAGLLSISV ALNAMSGHGT CTIVFVVAAA 
IINILVSSIQ TLDRISWIGW IGLVGIMSSV IALAIAVSVQ DRPSAAPATG DWSPDIVLVG 
NPSFSAAIGA LSNIIFSFAG APNFFNIVAE MKNPRDFNKA LISCQTFVTA AYLIIGCVVY 
HYCGQYITSP ALGSAGILMK KVCYGLAFPG LVVGCVLNTH LPAKYIFVRL MRNSKHLSAN 
TIQHRVIWIS CVVFNCTVSF VIAEGIPIFN DLIGLIGALF ATPNAIIFEC MMYIWDVYYC 
ADKYPSQHTW KQRSIQAFNV IIMLLSIFAM VAGTYAAAVT IRDDVASNAT SKPFSCDDNS 
G