Gene CND01960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND01960 
Symbol 
ID3256940 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand
Start bp530918 
End bp532849 
Gene Length1932 bp 
Protein Length471 aa 
Translation table 
GC content47% 
IMG OID638256131 
Productexpressed protein 
Protein accessionXP_570459 
Protein GI58266606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCTTTGAGGC TCGAGCATAC GGTCGCAAAA AAGGCTCTCA GCGGGACGTC CGAGAGACCG 
AGCATTGAAG CCTACAAGTG GATGGAGAGG ACCAATAGCC CTACGGTTAA ATCACGGTCA
TCACTCCACA TTAACCTCAA TAAAGGTATA TGCGCCGTGT GATCATTCAT CCGCTTCTTC
GTCCGTTGAT CGCTCTCCCG ATTCTCTTAC TGATCATGCA TGCTCTGAAA GCACAATGGT
ATCGCTTGGG GAAAGGGAAA GGGAAGTCTA TGAGTAAAAC CTCTGACACT GGAGTTCAAA
ATGAGGAAAC TGAGTATCCT AATCCAAATG GGCAACGAAT AGTTGTAGGC CATTTTATGG
TGGGCTTTCT CTTCCATGGA TCTGCCATCA TAGATTCTGA CAGCCAATAG CTCGGGAACA
CATATCCTTT TCAGCCCGAA GATTGGGAAA GGGTTTTTAG TCTTGCCCAA GACACCTCCT
TGTAAGTTAC CATGTGGGAT GTCAAGAAGC AATCATAGCT CACTAGTTAT CCATAGAGAC
GGCTTGGCCT TAAATATAGG CCCAGAGGAA TGGCAACTCT CTCAGGCACA AGTAGCCTAC
AATATCCTCT CGTCACGGCC CACCCCATCC AATGCACGAC CCCTCAAGCT CTTCTTGTCT
CTCGACATGA ATGTTTTATC TCCCTCTCCT TCAGAACTGT CAACACTTAT CATCAAAGTT
ATTTCTTCTG GCCGAGACTC GCAAATGAGA TGGGATGGGA AGGTGTTACT GAGCACATTC
TCCGGGCACT CTTTAGGTGA CGATGGCTGG ATAGATGTTC TGCGTCTTGT AGAAAGGGGA
TTGGGAGAAG AAGTGACGTT TTGGCCGGCT TTCTTTATGC CTCCAGAAGA TTTCTTGGGG
AAAAGTTATG TTGATGGTGC ATTTGCATGG AACAATGCTT GGTAAGTTTT GTGCGTTCTG
TAAACGGCTT TCTTTCTTAC ATGTTTTAGG CCTATGGGTA ACCATACCAT TAATCTTGAA
GAGGACCGCC CGTTTTTGGA GAGCAAGATA CCGTACATGG CGGCGGTATC TCCACTCTTC
TTTACTCATT ATGGTACTGA AGGAGAATTC GGCTGGAACA AGTAGGTAAA CCGCGGACCT
TATTCGAGAG TTCATGCTGA CACTTCGCAT AGGAACTGGA TTTGTGGGTT TATTTGCAGT
CTCATTTCTG AAGGTTCCAA CTAAATATTT TACAGACCGG TCGGACGATC TTCTTTTGCC
TTCTCGATTC CTCTCTCTTC TCTCACTTCC CAATTCTCGC TCACCCTCCA TCGTACAACT
GATCTCCATG AATGACTATG GGGAATCACA CAACCTCTTT CCAGTTATGG GAGCCCAACC
TGGGTCAGAT TCATGGACTT CAGGCATGGA CCACGAGGGT CTGAGATGGA TAAGCAAATA
CTTCTTGCAG AGGTGGAGAG ATGGAAAGGG AGAAGTGGAA GGTATAGATG AAGTGAAGCT
TGTGCTATGG TACAGGACAA AGCCAGCTGT GATGGAAACC GAAGATTCTG TAGGGAGACC
ACGGAATGCC GACTGGGTAG GTCTGGTTGC TGCTTCTTAT GAGGCGCCAA GCTGACACTG
GAGGGCACAG GCACAAGACT TGATCAATCT TTTTATCATC ATCCCCTCAT CCTCACCCTC
TTCTCGTTAC ATGCTTCAAA TTCGGAATGG TCCTCATCTC CATCGACGTC ATCTTTCCTG
TGAAAAGCTT AACCTTTTGA CCGTCCCTTT TGTACCTGGT CAAGTTACAT ACGAAATCCT
AGAAAATGAG AAGATGATTA TCCAAGGTGA AGGGAAAGCA ATTGAGGCAG AAGGCGCATG
GAATTTCAAT ATGTGGAGTG GCGGAGTCTT TTGAATACAC AGCGGCGATC CTGTATATAT
TCGAGCTGTA TC
 
Protein sequence
MERTNSPTVK SRSSLHINLN KAQWYRLGKG KGKSMSKTSD TGVQNEETEY PNPNGQRIVV 
GHFMLGNTYP FQPEDWERVF SLAQDTSLDG LALNIGPEEW QLSQAQVAYN ILSSRPTPSN
ARPLKLFLSL DMNVLSPSPS ELSTLIIKVI SSGRDSQMRW DGKVLLSTFS GHSLGDDGWI
DVLRLVERGL GEEVTFWPAF FMPPEDFLGK SYVDGAFAWN NAWPMGNHTI NLEEDRPFLE
SKIPYMAAVS PLFFTHYGTE GEFGWNKNWI YRSDDLLLPS RFLSLLSLPN SRSPSIVQLI
SMNDYGESHN LFPVMGAQPG SDSWTSGMDH EGLRWISKYF LQRWRDGKGE VEGIDEVKLV
LWYRTKPAVM ETEDSVGRPR NADWAQDLIN LFIIIPSSSP SSRYMLQIRN GPHLHRRHLS
CEKLNLLTVP FVPGQVTYEI LENEKMIIQG EGKAIEAEGA WNFNMWSGGV F