Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND01650 |
Symbol | |
ID | 3257367 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | - |
Start bp | 447150 |
End bp | 447961 |
Gene Length | 812 bp |
Protein Length | 191 aa |
Translation table | |
GC content | 46% |
IMG OID | 638256100 |
Product | conserved hypothetical protein |
Protein accession | XP_570404 |
Protein GI | 58266496 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1096] Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.432469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATCAC CATCGTTGCT TCTGCCCGGT CAACCCTTAC CGGCCCAACT TATCACCCCG CCCCTACCGA AATGCGGAAA AGGTTGTTAT GAGCGCAACG GTCAAATCTT GGCTAGTGTT GTGGGAAGAC CACGGAGAGA CGGTGCTGTG AGCCATGTTC AAGATCCGTT GTCGTGTACT GTATAGTGCT GATAGATTCT ATGCAGGTTG TCAGCGTTAT AGGGAGGGAG GAAACCGTCG GTACAGTCGA TGTAGACTCC ATCGTGATCG GCGTTGTAAG TGTCCCCGCC TGACTACGAC TGTGAAATAT CACTCATGCA AATCTCAGAT TTCTAGATTG ACACCTCAAC AGGCACATAT GACTCTTACA ACTTTGAGCG ATCGTCCCCT TCCCGAATCT TCAGAAGATT TCACGGGCCT GATTCGAATT GCGGACATTA GGTTAACAGA AAGAGACAAG GTGAAAATGG GTGAATGTTT CAGATTAGGC GATATTGTTA AGGCGAAGGT GGTGAGTTTT TCTCAATCTT TGAATCTCAC GGGAGCGACC GCGCTGAAAG ATTCAATGTT ATAGCTAAGT TTAGGTGATG CAAGGAGCTA CTATTTGTCA ACCGCAGCGG ACGAGCTGGG CGTCGTATAT GCGAAATCAG AAGCTGGTAC GTTTGTTGAC TGCATTTTCT TTCTTTTTCA AATCATTTAC TGATCAATGA CGTACAGGTA ATCCCTTATT GCCGGTTAGC TATCAGGAAA TGGAGGACGA AGTGACTGGG AAAAAGGAGA AGAGAAAAGT TGCGAAGCCT GAAGGAATAT AA
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Protein sequence | MSSPSLLLPG QPLPAQLITP PLPKCGKGCY ERNGQILASV VGRPRRDGAV VSVIGREETV GTVDVDSIVI GVISRLTPQQ AHMTLTTLSD RPLPESSEDF TGLIRIADIR LTERDKVKMG ECFRLGDIVK AKVLSLGDAR SYYLSTAADE LGVVYAKSEA GNPLLPVSYQ EMEDEVTGKK EKRKVAKPEG I
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