Gene CND01570 details

Gene Information

• Locus tag: CND01570
• ID: 3256984
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006686
• Strand: +
• Start bp: 432701
• End bp: 434826
• Gene Length: 2126 bp
• Protein Length: 561 aa
• GC content: 52%
• IMG OID: 638256092
• Product: succinate-semialdehyde dehydrogenase, putative
• Protein accession: XP_570279
• Protein GI: 58266246
• COG category: [C] Energy production and conversion
• COG ID: [COG1012] NAD-dependent aldehyde dehydrogenases
• TIGRFAM ID: [TIGR01780] succinate-semialdehyde dehydrogenase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.0842141
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAAGTTATTT AAAACTCTAC GAGCTTTTCC TCTCAACAAA AGACATGCCA ATAAGATCGC 
CCACTTCTCT TTCCCTCAAA AGATCCAGCC ACTTCACAAC TGCCACACGA CGACTGCACA 
CTTCCACACC TACCCTCATC GCTGCTGCCT CTCTCTCCAA AAAGCTCCAA CGTTTCAGCC 
CTCAGCTCAC GCCCCGCCTT CTTGCACCAA ACGGATCGCG AACAATGTCC AACTGGCCCA 
AAGTCACCTC TGAGAACCCC GTAAGTCGCC TTTGCCCCAT CTTCTTTGGC TCTACTGACG 
TCATTGGCAT TATCCAGCTT GGTCTCGACG ACCCTTCTCT CTTCATCCAG AAGGGCTTCA 
TCAACGGCCA GTATGTCGGT ACCCAATCCG GCAAGACTTT CGAGGTCAAC GGTGAGTAAA 
ATGTCAGCGT ATCACAAGCA TCCAACTGAT CGATCATGGA TAGACCCTGC CTCTGGCAAG 
ACCATCGGTA CTTGCCCCGA GATGACCGTT GAGGACACTC GTCACGCTAT CGAAGTCGCC 
GAAAAGGCCT TTGCCACTTT CCGTAACACC AGCCCTGTTC AGCGTTCCAA TTGGCTCTCC 
GAGCTCTACC GTCTCTACCA GGCTTCTATC AAGGACATCG CCCGTTTGAT CGTTTGGGAG 
AACGGCAAGT CTTGGAACGA CGCTATGGCC GAGGCCACTT ATGCCGGTAC CTTCTTCTCA 
TGGTTCGCGG GTGAGGCTCT CAGGACCTAT GGCGACGTCA TTCCTTGCTC TGTCCCCGGT 
ACCAGGAACT TTTCCATCAA GCAGCCCATC GGTGTTGTTG CTTTGCTTTG CCCATGGAAC 
TTCCCCGCTG CTATGATTGC CAGGAAGATG GGTCCCGCTC TCGCTGTCGG ATGCACTTCT 
GTCATCAAGA CTCCTTCCGA GACTCCCTTC ACTACTCTTG CCATCATCGA GGTAAGTCTT 
GTACTTTTTA TACCTTTGAA AGGCTCTGGA CTAAAAGATT TCTTGCAGCT TGCCCGACGA 
GCCGGCATTC CCGACGGCGT CATCAACGTC ATCACCACTG ACGCCAACCT CCAGGATGTC 
GGCAAGGAAC TCTGTACCAA CCCTGCCGTC CACAAGGTCT CCTTCACTGG TTCAACCCGA 
GTCGGCAAGA TCCTTGCTTC TCAGTGCTCT TCAACCCTCA AGAAGATGTC TCTCGAGCTC 
GGTGGTAACG CTCCTCTCAT TGTCTTTGAA GACGCCGACA TCCCTACCGC CGTTGCCGGT 
ACCATCGCTT CCAAGTTCCG AGGTTCAGGT CAGACTTGCG TCTGTGCCAA CAGAATCTAC 
GTCCACGAAG CCATCTATGA CGAATTTGCA AAGAAGCTCG CCGAGAAAGT CGCCGAATTC 
AAGGTCGGTC CCGGTTTCGG AGAAGGTGTT ACCCACGGTC CTTTGATCCA TTCTCGGCAG 
GCCGACAAGG TGGAGGAGGT GAGTCGTTCA TTATCCCTTT AAAATTGTGG GCCACTGCTA 
ATTCATCTAC CTCAGCACGT CCAAGATGCT ATCAAGAAGG GCGCCAAGGT TCTCGTTGGT 
GGCAAGCGAG GAAATGGTAC CGAATACATC CCCACCGTCC TCACCAATGT CAGCGACGAA 
TGCGTAAGTT TCTTGTGGTC TATACCCAAA AAACTGTTGA TCATGCTAAC TCTTTATATT 
ATCAAGTTGA TCGCTACCGA GGAGACTTTC GGTCCCGTTG CAGCTCTCTT CCGATTCTCT 
TCTGAAGAGG AAGTTGTGGC GAGGGCCAAC CGTGCCGAAG TCGGTCTTGC TGGCTACTTC 
TTCTCCAGGG ACTCTGACAG GATCTGGAGG GTTGCCGAGG CCCTTGAGAC CGGTATGGTC 
GGTGCCAACA CCGGTATGAT CTCTCAAGCC GTCATGTAAG TTTTCTTTTT CCTTTTTATC 
TCGAAAATGC CCTGACAAAC CTAAATCGAT AGTCCCTTTG GTGGTATCAA GGAGTCTGGT 
TATGGCAAGG AAGGCGGTCG ACAAGGTACG GAGGAGTACA CCATCACCAA GCTTGTAGCC 
GTCGGCACTT CATTGCACAA CATGCCAAAG TAAAAGAAGA AAGGGGGGAA TGTATAAAAG 
AAGCTACTGG AACTATTCCA AAACTC 

 

Protein sequence

MPIRSPTSLS LKRSSHFTTA TRRLHTSTPT LIAAASLSKK LQRFSPQLTP RLLAPNGSRT 
MSNWPKVTSE NPLGLDDPSL FIQKGFINGQ YVGTQSGKTF EVNDPASGKT IGTCPEMTVE 
DTRHAIEVAE KAFATFRNTS PVQRSNWLSE LYRLYQASIK DIARLIVWEN GKSWNDAMAE 
ATYAGTFFSW FAGEALRTYG DVIPCSVPGT RNFSIKQPIG VVALLCPWNF PAAMIARKMG 
PALAVGCTSV IKTPSETPFT TLAIIELARR AGIPDGVINV ITTDANLQDV GKELCTNPAV 
HKVSFTGSTR VGKILASQCS STLKKMSLEL GGNAPLIVFE DADIPTAVAG TIASKFRGSG 
QTCVCANRIY VHEAIYDEFA KKLAEKVAEF KVGPGFGEGV THGPLIHSRQ ADKVEEHVQD 
AIKKGAKVLV GGKRGNGTEY IPTVLTNVSD ECLIATEETF GPVAALFRFS SEEEVVARAN 
RAEVGLAGYF FSRDSDRIWR VAEALETGMV GANTGMISQA VIPFGGIKES GYGKEGGRQG 
TEEYTITKLV AVGTSLHNMP K